Ggra6791.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra6791.t1
Unique Name	Ggra6791.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	669

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:527021..529027 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6791	Ggra6791	Gracilaria gracilis GNS1m male	gene	tig00000056_pilon 527021..529027 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra6791.t1.stop1	Ggra6791.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000056_pilon 527021..527023 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra6791.t1.CDS1	Ggra6791.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000056_pilon 527021..529027 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra6791.t1.exon1	Ggra6791.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000056_pilon 527021..529027 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra6791.t1.start1	Ggra6791.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000056_pilon 529025..529027 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra6791.t1	Ggra6791.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000056_pilon 527021..529027 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000056_pilon:527021..529027-
coding sequence from alignment at tig00000056_pilon:527021..529027-

mRNA sequence

>Ggra6791.t1 ID=Ggra6791.t1|Name=Ggra6791.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=669bp
MGTLRDDERAPPTMDDNNAIIPVPDDCDMPDISWEYHDNPEQPPPPSPPP
PSRADEKRPAAAAPRAVERDAPQPALHAADAREQQLADDVNTSSGRYFSA
PQPWQKRKIDKHKKKPATQLFCDVCDVTVNSQKTMDMHIKGRAHRTKLSQ
RRFAAANKELDRPYQELHRRTLAEMGISLDSAHHNAPQRVQSQPPAADAD
AVAAAAPVVMEASRPVVADVHAADVRPASPSSPAMRSPPPPPVLSTPPPP
VRSTPPPPPMRSTPPPPMRSTPPPPMRSTPPPPMRSTPPPPMGSTPPLPM
RSTPPPPVERVRPANDDRMQIDSDGASPPASAAAPHASTALPHASTAPPH
ASMAAPAVRSPPRLAAPPCVPTRHLASLSLTRAVGGAMDANSSENSTAPS
TPRLRSGEPISPRLRSERAAAPRLRSERVDGAAGAVRMEPVMKPIPWDPY
VREFKPELVGKYGGRVPQDLLDARMSLSEWRELRRAVFEKGDDVDKLAFK
IMAEMLLSPTLGVREDALTHMNNAMKKMKNVHYYSRETGWYMAMSNVPEK
LWKREARFVHGDVQWMKQQSAEDKALHLICENLHYMFDQGEDYEVVADKA
HFSALPFRGGVTGWRSGVSKGIDRDGGRGVGDENAVEKDELFEQIHQFLV
DEKMKAQQQQQQQQQQGG*

spliced messenger RNA

>Ggra6791.t1 ID=Ggra6791.t1|Name=Ggra6791.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2007bp|location=Sequence derived from alignment at tig00000056_pilon:527021..529027- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCACTCTGCGCGATGACGAGCGCGCGCCGCCGACCATGGACGACAA
CAACGCCATCATTCCCGTGCCGGACGACTGCGACATGCCCGACATCAGCT
GGGAGTACCACGACAACCCGGAGCAACCGCCGCCGCCGTCGCCGCCGCCG
CCGTCGCGCGCCGACGAAAAGCGGCCCGCCGCCGCTGCACCGCGCGCGGT
GGAGCGCGATGCGCCGCAGCCGGCGCTGCACGCCGCCGACGCGCGCGAGC
AGCAGCTCGCCGACGACGTCAACACGTCGTCCGGCCGCTACTTTAGCGCG
CCGCAGCCGTGGCAGAAGCGCAAGATCGACAAGCACAAGAAGAAGCCCGC
CACGCAGCTGTTCTGCGACGTATGCGACGTCACCGTCAACAGCCAAAAGA
CCATGGACATGCACATCAAGGGGCGCGCCCACCGCACCAAGCTCAGCCAG
CGCCGCTTCGCCGCCGCGAACAAGGAGCTGGACCGCCCGTACCAGGAGCT
GCACCGCCGCACCCTGGCCGAGATGGGCATTTCTCTAGACAGCGCGCACC
ACAACGCGCCGCAGCGCGTGCAGTCGCAGCCGCCGGCCGCCGACGCCGAC
GCCGTCGCCGCCGCCGCGCCCGTTGTTATGGAGGCCTCGCGCCCCGTCGT
TGCCGACGTGCATGCCGCGGACGTCCGTCCCGCGTCACCGTCTTCGCCTG
CGATGCGATCGCCGCCGCCGCCTCCCGTGCTGTCGACTCCACCGCCTCCG
GTGCGATCGACGCCGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCC
GATGCGATCAACGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCCGA
TGCGATCAACGCCGCCGCCGCCGATGGGATCAACGCCGCCGCTGCCGATG
CGATCGACGCCGCCACCGCCGGTGGAGCGAGTGCGCCCCGCCAACGACGA
CCGCATGCAAATCGATAGCGACGGCGCCTCGCCGCCCGCATCGGCGGCGG
CGCCGCACGCATCAACGGCGCTGCCGCACGCATCAACGGCGCCGCCGCAC
GCATCGATGGCAGCACCCGCCGTTCGCTCACCGCCGCGTTTGGCAGCGCC
GCCTTGTGTGCCCACTCGCCACCTCGCCTCGCTGTCGCTCACGCGCGCTG
TAGGCGGCGCCATGGACGCCAACAGCAGCGAGAACAGCACGGCGCCGTCA
ACGCCGCGTCTGCGCAGCGGCGAGCCCATATCGCCGCGGCTGCGCAGCGA
GCGTGCGGCGGCGCCGCGACTGCGCAGCGAGCGCGTGGACGGCGCGGCGG
GCGCGGTGCGCATGGAGCCGGTGATGAAGCCCATCCCGTGGGACCCGTAC
GTGCGGGAGTTCAAGCCGGAGCTGGTGGGAAAGTATGGCGGACGCGTGCC
GCAGGACTTGTTGGATGCGCGCATGTCGTTGTCGGAGTGGCGCGAGCTGA
GGCGGGCGGTGTTTGAGAAGGGCGATGATGTGGATAAGCTGGCGTTTAAG
ATTATGGCGGAGATGTTGTTGTCGCCCACGCTGGGCGTGCGGGAGGACGC
TTTGACGCACATGAATAACGCGATGAAGAAGATGAAGAACGTGCACTATT
ACAGCCGCGAAACGGGTTGGTACATGGCGATGAGCAACGTGCCGGAGAAG
CTGTGGAAGAGGGAGGCGAGGTTTGTGCATGGGGATGTGCAGTGGATGAA
GCAGCAGTCGGCGGAGGACAAGGCGCTGCACCTGATTTGCGAGAACCTGC
ACTACATGTTTGACCAGGGGGAGGATTACGAGGTTGTGGCGGACAAGGCG
CACTTTTCAGCGCTGCCGTTCCGCGGCGGGGTGACGGGGTGGCGTAGCGG
GGTGAGCAAGGGCATCGATCGCGACGGCGGGCGCGGGGTGGGCGACGAGA
ACGCGGTGGAGAAGGACGAGCTGTTTGAACAAATCCACCAGTTTCTGGTG
GACGAGAAGATGAAAGCGCAACAACAACAACAACAACAACAACAACAAGG
TGGGTAG

protein sequence of Ggra6791.t1

>Ggra6791.t1 ID=Ggra6791.t1|Name=Ggra6791.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=669bp
MGTLRDDERAPPTMDDNNAIIPVPDDCDMPDISWEYHDNPEQPPPPSPPP
PSRADEKRPAAAAPRAVERDAPQPALHAADAREQQLADDVNTSSGRYFSA
PQPWQKRKIDKHKKKPATQLFCDVCDVTVNSQKTMDMHIKGRAHRTKLSQ
RRFAAANKELDRPYQELHRRTLAEMGISLDSAHHNAPQRVQSQPPAADAD
AVAAAAPVVMEASRPVVADVHAADVRPASPSSPAMRSPPPPPVLSTPPPP
VRSTPPPPPMRSTPPPPMRSTPPPPMRSTPPPPMRSTPPPPMGSTPPLPM
RSTPPPPVERVRPANDDRMQIDSDGASPPASAAAPHASTALPHASTAPPH
ASMAAPAVRSPPRLAAPPCVPTRHLASLSLTRAVGGAMDANSSENSTAPS
TPRLRSGEPISPRLRSERAAAPRLRSERVDGAAGAVRMEPVMKPIPWDPY
VREFKPELVGKYGGRVPQDLLDARMSLSEWRELRRAVFEKGDDVDKLAFK
IMAEMLLSPTLGVREDALTHMNNAMKKMKNVHYYSRETGWYMAMSNVPEK
LWKREARFVHGDVQWMKQQSAEDKALHLICENLHYMFDQGEDYEVVADKA
HFSALPFRGGVTGWRSGVSKGIDRDGGRGVGDENAVEKDELFEQIHQFLV
DEKMKAQQQQQQQQQQGG*

mRNA from alignment at tig00000056_pilon:527021..529027-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra6791.t1 ID=Ggra6791.t1|Name=Ggra6791.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2007bp|location=Sequence derived from alignment at tig00000056_pilon:527021..529027- (Gracilaria gracilis GNS1m male)
ATGGGCACTCTGCGCGATGACGAGCGCGCGCCGCCGACCATGGACGACAA
CAACGCCATCATTCCCGTGCCGGACGACTGCGACATGCCCGACATCAGCT
GGGAGTACCACGACAACCCGGAGCAACCGCCGCCGCCGTCGCCGCCGCCG
CCGTCGCGCGCCGACGAAAAGCGGCCCGCCGCCGCTGCACCGCGCGCGGT
GGAGCGCGATGCGCCGCAGCCGGCGCTGCACGCCGCCGACGCGCGCGAGC
AGCAGCTCGCCGACGACGTCAACACGTCGTCCGGCCGCTACTTTAGCGCG
CCGCAGCCGTGGCAGAAGCGCAAGATCGACAAGCACAAGAAGAAGCCCGC
CACGCAGCTGTTCTGCGACGTATGCGACGTCACCGTCAACAGCCAAAAGA
CCATGGACATGCACATCAAGGGGCGCGCCCACCGCACCAAGCTCAGCCAG
CGCCGCTTCGCCGCCGCGAACAAGGAGCTGGACCGCCCGTACCAGGAGCT
GCACCGCCGCACCCTGGCCGAGATGGGCATTTCTCTAGACAGCGCGCACC
ACAACGCGCCGCAGCGCGTGCAGTCGCAGCCGCCGGCCGCCGACGCCGAC
GCCGTCGCCGCCGCCGCGCCCGTTGTTATGGAGGCCTCGCGCCCCGTCGT
TGCCGACGTGCATGCCGCGGACGTCCGTCCCGCGTCACCGTCTTCGCCTG
CGATGCGATCGCCGCCGCCGCCTCCCGTGCTGTCGACTCCACCGCCTCCG
GTGCGATCGACGCCGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCC
GATGCGATCAACGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCCGA
TGCGATCAACGCCGCCGCCGCCGATGGGATCAACGCCGCCGCTGCCGATG
CGATCGACGCCGCCACCGCCGGTGGAGCGAGTGCGCCCCGCCAACGACGA
CCGCATGCAAATCGATAGCGACGGCGCCTCGCCGCCCGCATCGGCGGCGG
CGCCGCACGCATCAACGGCGCTGCCGCACGCATCAACGGCGCCGCCGCAC
GCATCGATGGCAGCACCCGCCGTTCGCTCACCGCCGCGTTTGGCAGCGCC
GCCTTGTGTGCCCACTCGCCACCTCGCCTCGCTGTCGCTCACGCGCGCTG
TAGGCGGCGCCATGGACGCCAACAGCAGCGAGAACAGCACGGCGCCGTCA
ACGCCGCGTCTGCGCAGCGGCGAGCCCATATCGCCGCGGCTGCGCAGCGA
GCGTGCGGCGGCGCCGCGACTGCGCAGCGAGCGCGTGGACGGCGCGGCGG
GCGCGGTGCGCATGGAGCCGGTGATGAAGCCCATCCCGTGGGACCCGTAC
GTGCGGGAGTTCAAGCCGGAGCTGGTGGGAAAGTATGGCGGACGCGTGCC
GCAGGACTTGTTGGATGCGCGCATGTCGTTGTCGGAGTGGCGCGAGCTGA
GGCGGGCGGTGTTTGAGAAGGGCGATGATGTGGATAAGCTGGCGTTTAAG
ATTATGGCGGAGATGTTGTTGTCGCCCACGCTGGGCGTGCGGGAGGACGC
TTTGACGCACATGAATAACGCGATGAAGAAGATGAAGAACGTGCACTATT
ACAGCCGCGAAACGGGTTGGTACATGGCGATGAGCAACGTGCCGGAGAAG
CTGTGGAAGAGGGAGGCGAGGTTTGTGCATGGGGATGTGCAGTGGATGAA
GCAGCAGTCGGCGGAGGACAAGGCGCTGCACCTGATTTGCGAGAACCTGC
ACTACATGTTTGACCAGGGGGAGGATTACGAGGTTGTGGCGGACAAGGCG
CACTTTTCAGCGCTGCCGTTCCGCGGCGGGGTGACGGGGTGGCGTAGCGG
GGTGAGCAAGGGCATCGATCGCGACGGCGGGCGCGGGGTGGGCGACGAGA
ACGCGGTGGAGAAGGACGAGCTGTTTGAACAAATCCACCAGTTTCTGGTG
GACGAGAAGATGAAAGCGCAACAACAACAACAACAACAACAACAACAAGG
TGGGTAG

Coding sequence (CDS) from alignment at tig00000056_pilon:527021..529027-

>Ggra6791.t1 ID=Ggra6791.t1|Name=Ggra6791.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2007bp|location=Sequence derived from alignment at tig00000056_pilon:527021..529027- (Gracilaria gracilis GNS1m male)
ATGGGCACTCTGCGCGATGACGAGCGCGCGCCGCCGACCATGGACGACAA
CAACGCCATCATTCCCGTGCCGGACGACTGCGACATGCCCGACATCAGCT
GGGAGTACCACGACAACCCGGAGCAACCGCCGCCGCCGTCGCCGCCGCCG
CCGTCGCGCGCCGACGAAAAGCGGCCCGCCGCCGCTGCACCGCGCGCGGT
GGAGCGCGATGCGCCGCAGCCGGCGCTGCACGCCGCCGACGCGCGCGAGC
AGCAGCTCGCCGACGACGTCAACACGTCGTCCGGCCGCTACTTTAGCGCG
CCGCAGCCGTGGCAGAAGCGCAAGATCGACAAGCACAAGAAGAAGCCCGC
CACGCAGCTGTTCTGCGACGTATGCGACGTCACCGTCAACAGCCAAAAGA
CCATGGACATGCACATCAAGGGGCGCGCCCACCGCACCAAGCTCAGCCAG
CGCCGCTTCGCCGCCGCGAACAAGGAGCTGGACCGCCCGTACCAGGAGCT
GCACCGCCGCACCCTGGCCGAGATGGGCATTTCTCTAGACAGCGCGCACC
ACAACGCGCCGCAGCGCGTGCAGTCGCAGCCGCCGGCCGCCGACGCCGAC
GCCGTCGCCGCCGCCGCGCCCGTTGTTATGGAGGCCTCGCGCCCCGTCGT
TGCCGACGTGCATGCCGCGGACGTCCGTCCCGCGTCACCGTCTTCGCCTG
CGATGCGATCGCCGCCGCCGCCTCCCGTGCTGTCGACTCCACCGCCTCCG
GTGCGATCGACGCCGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCC
GATGCGATCAACGCCGCCGCCTCCGATGCGATCAACGCCGCCGCCTCCGA
TGCGATCAACGCCGCCGCCGCCGATGGGATCAACGCCGCCGCTGCCGATG
CGATCGACGCCGCCACCGCCGGTGGAGCGAGTGCGCCCCGCCAACGACGA
CCGCATGCAAATCGATAGCGACGGCGCCTCGCCGCCCGCATCGGCGGCGG
CGCCGCACGCATCAACGGCGCTGCCGCACGCATCAACGGCGCCGCCGCAC
GCATCGATGGCAGCACCCGCCGTTCGCTCACCGCCGCGTTTGGCAGCGCC
GCCTTGTGTGCCCACTCGCCACCTCGCCTCGCTGTCGCTCACGCGCGCTG
TAGGCGGCGCCATGGACGCCAACAGCAGCGAGAACAGCACGGCGCCGTCA
ACGCCGCGTCTGCGCAGCGGCGAGCCCATATCGCCGCGGCTGCGCAGCGA
GCGTGCGGCGGCGCCGCGACTGCGCAGCGAGCGCGTGGACGGCGCGGCGG
GCGCGGTGCGCATGGAGCCGGTGATGAAGCCCATCCCGTGGGACCCGTAC
GTGCGGGAGTTCAAGCCGGAGCTGGTGGGAAAGTATGGCGGACGCGTGCC
GCAGGACTTGTTGGATGCGCGCATGTCGTTGTCGGAGTGGCGCGAGCTGA
GGCGGGCGGTGTTTGAGAAGGGCGATGATGTGGATAAGCTGGCGTTTAAG
ATTATGGCGGAGATGTTGTTGTCGCCCACGCTGGGCGTGCGGGAGGACGC
TTTGACGCACATGAATAACGCGATGAAGAAGATGAAGAACGTGCACTATT
ACAGCCGCGAAACGGGTTGGTACATGGCGATGAGCAACGTGCCGGAGAAG
CTGTGGAAGAGGGAGGCGAGGTTTGTGCATGGGGATGTGCAGTGGATGAA
GCAGCAGTCGGCGGAGGACAAGGCGCTGCACCTGATTTGCGAGAACCTGC
ACTACATGTTTGACCAGGGGGAGGATTACGAGGTTGTGGCGGACAAGGCG
CACTTTTCAGCGCTGCCGTTCCGCGGCGGGGTGACGGGGTGGCGTAGCGG
GGTGAGCAAGGGCATCGATCGCGACGGCGGGCGCGGGGTGGGCGACGAGA
ACGCGGTGGAGAAGGACGAGCTGTTTGAACAAATCCACCAGTTTCTGGTG
GACGAGAAGATGAAAGCGCAACAACAACAACAACAACAACAACAACAAGG
TGGGTAG