Ggra6763.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6763.t1
Unique NameGgra6763.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length278
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:453051..453884 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog2880.D7FWP2
PFAMsAcyltransferase
Max annot lvl2759|Eukaryota
Evalue9.72e-36
EggNOG OGs2DZHH@1|root,2S71D@2759|Eukaryota
DescriptionAcyltransferase
COG categoryI
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6763Ggra6763Gracilaria gracilis GNS1m malegenetig00000056_pilon 453051..453884 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6763.t1.stop1Ggra6763.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 453051..453053 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6763.t1.CDS1Ggra6763.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 453051..453884 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6763.t1.exon1Ggra6763.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 453051..453884 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6763.t1.start1Ggra6763.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 453882..453884 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6763.t1Ggra6763.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 453051..453884 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6763.t1 ID=Ggra6763.t1|Name=Ggra6763.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=278bp
MGVFTPPLRFLFALAFLNCLLATWLVTKLVHLAPALGDRRRRESISIAVS
STFFWCLMLLPCPWLRIRGLPELRAAWTEMSKQRGAPYVIANHNSKLDSL
LITALLPTSLGPRMRSLIKLALFSEPLFGGICRCVGHFPVYFRASAEGEF
GVNKQAQKEVSEQMDLFVQRGGGLLIFPEGQLNRNAPKLQTFRRGAFALP
IKHNKAIWAFLNVGCEKSWPHTMFIGGVPADIHVKAFKITDDASQFDAVS
LAEHARELMQRELDNMYAAAAMRANKL*
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spliced messenger RNA

>Ggra6763.t1 ID=Ggra6763.t1|Name=Ggra6763.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=834bp|location=Sequence derived from alignment at tig00000056_pilon:453051..453884- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGTCTTCACGCCGCCGCTGCGATTTTTGTTTGCACTGGCCTTTCT
CAATTGCTTGCTCGCCACATGGCTCGTCACCAAGCTCGTGCATCTCGCGC
CCGCGCTCGGCGATCGCCGCCGCCGTGAGTCCATCAGCATCGCCGTATCC
TCCACCTTCTTCTGGTGTCTCATGCTCTTGCCGTGCCCATGGCTGCGTAT
ACGCGGCCTCCCCGAGCTGCGCGCTGCCTGGACCGAGATGAGCAAGCAGC
GCGGCGCGCCCTATGTCATCGCCAACCACAACTCCAAGCTCGACTCGCTG
CTCATCACCGCGCTGCTTCCCACTTCGCTCGGCCCGCGCATGCGCAGCCT
CATCAAGCTCGCGCTCTTCTCCGAGCCGCTGTTCGGCGGCATCTGCCGCT
GCGTGGGCCACTTTCCCGTGTACTTTCGCGCCAGCGCCGAGGGCGAGTTC
GGCGTGAACAAGCAAGCGCAGAAGGAGGTGTCCGAGCAGATGGATCTCTT
TGTGCAGCGCGGCGGCGGGCTGCTCATCTTTCCGGAGGGCCAGCTGAACC
GCAACGCGCCAAAGTTGCAGACGTTTCGACGCGGCGCGTTTGCGCTGCCT
ATCAAGCATAACAAGGCCATCTGGGCGTTTTTGAACGTCGGCTGTGAGAA
GAGTTGGCCGCATACCATGTTCATTGGCGGCGTGCCGGCCGATATTCACG
TCAAGGCATTTAAGATCACGGACGATGCGTCGCAGTTTGATGCCGTGTCG
CTTGCGGAGCACGCGAGGGAGCTCATGCAACGGGAGCTCGATAACATGTA
TGCCGCAGCGGCAATGCGCGCGAACAAGTTGTGA
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protein sequence of Ggra6763.t1

>Ggra6763.t1 ID=Ggra6763.t1|Name=Ggra6763.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=278bp
MGVFTPPLRFLFALAFLNCLLATWLVTKLVHLAPALGDRRRRESISIAVS
STFFWCLMLLPCPWLRIRGLPELRAAWTEMSKQRGAPYVIANHNSKLDSL
LITALLPTSLGPRMRSLIKLALFSEPLFGGICRCVGHFPVYFRASAEGEF
GVNKQAQKEVSEQMDLFVQRGGGLLIFPEGQLNRNAPKLQTFRRGAFALP
IKHNKAIWAFLNVGCEKSWPHTMFIGGVPADIHVKAFKITDDASQFDAVS
LAEHARELMQRELDNMYAAAAMRANKL*
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mRNA from alignment at tig00000056_pilon:453051..453884-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6763.t1 ID=Ggra6763.t1|Name=Ggra6763.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=834bp|location=Sequence derived from alignment at tig00000056_pilon:453051..453884- (Gracilaria gracilis GNS1m male)
ATGGGCGTCTTCACGCCGCCGCTGCGATTTTTGTTTGCACTGGCCTTTCT
CAATTGCTTGCTCGCCACATGGCTCGTCACCAAGCTCGTGCATCTCGCGC
CCGCGCTCGGCGATCGCCGCCGCCGTGAGTCCATCAGCATCGCCGTATCC
TCCACCTTCTTCTGGTGTCTCATGCTCTTGCCGTGCCCATGGCTGCGTAT
ACGCGGCCTCCCCGAGCTGCGCGCTGCCTGGACCGAGATGAGCAAGCAGC
GCGGCGCGCCCTATGTCATCGCCAACCACAACTCCAAGCTCGACTCGCTG
CTCATCACCGCGCTGCTTCCCACTTCGCTCGGCCCGCGCATGCGCAGCCT
CATCAAGCTCGCGCTCTTCTCCGAGCCGCTGTTCGGCGGCATCTGCCGCT
GCGTGGGCCACTTTCCCGTGTACTTTCGCGCCAGCGCCGAGGGCGAGTTC
GGCGTGAACAAGCAAGCGCAGAAGGAGGTGTCCGAGCAGATGGATCTCTT
TGTGCAGCGCGGCGGCGGGCTGCTCATCTTTCCGGAGGGCCAGCTGAACC
GCAACGCGCCAAAGTTGCAGACGTTTCGACGCGGCGCGTTTGCGCTGCCT
ATCAAGCATAACAAGGCCATCTGGGCGTTTTTGAACGTCGGCTGTGAGAA
GAGTTGGCCGCATACCATGTTCATTGGCGGCGTGCCGGCCGATATTCACG
TCAAGGCATTTAAGATCACGGACGATGCGTCGCAGTTTGATGCCGTGTCG
CTTGCGGAGCACGCGAGGGAGCTCATGCAACGGGAGCTCGATAACATGTA
TGCCGCAGCGGCAATGCGCGCGAACAAGTTGTGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:453051..453884-

>Ggra6763.t1 ID=Ggra6763.t1|Name=Ggra6763.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=834bp|location=Sequence derived from alignment at tig00000056_pilon:453051..453884- (Gracilaria gracilis GNS1m male)
ATGGGCGTCTTCACGCCGCCGCTGCGATTTTTGTTTGCACTGGCCTTTCT
CAATTGCTTGCTCGCCACATGGCTCGTCACCAAGCTCGTGCATCTCGCGC
CCGCGCTCGGCGATCGCCGCCGCCGTGAGTCCATCAGCATCGCCGTATCC
TCCACCTTCTTCTGGTGTCTCATGCTCTTGCCGTGCCCATGGCTGCGTAT
ACGCGGCCTCCCCGAGCTGCGCGCTGCCTGGACCGAGATGAGCAAGCAGC
GCGGCGCGCCCTATGTCATCGCCAACCACAACTCCAAGCTCGACTCGCTG
CTCATCACCGCGCTGCTTCCCACTTCGCTCGGCCCGCGCATGCGCAGCCT
CATCAAGCTCGCGCTCTTCTCCGAGCCGCTGTTCGGCGGCATCTGCCGCT
GCGTGGGCCACTTTCCCGTGTACTTTCGCGCCAGCGCCGAGGGCGAGTTC
GGCGTGAACAAGCAAGCGCAGAAGGAGGTGTCCGAGCAGATGGATCTCTT
TGTGCAGCGCGGCGGCGGGCTGCTCATCTTTCCGGAGGGCCAGCTGAACC
GCAACGCGCCAAAGTTGCAGACGTTTCGACGCGGCGCGTTTGCGCTGCCT
ATCAAGCATAACAAGGCCATCTGGGCGTTTTTGAACGTCGGCTGTGAGAA
GAGTTGGCCGCATACCATGTTCATTGGCGGCGTGCCGGCCGATATTCACG
TCAAGGCATTTAAGATCACGGACGATGCGTCGCAGTTTGATGCCGTGTCG
CTTGCGGAGCACGCGAGGGAGCTCATGCAACGGGAGCTCGATAACATGTA
TGCCGCAGCGGCAATGCGCGCGAACAAGTTGTGA
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