Ggra6691.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6691.t1
Unique NameGgra6691.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length604
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:203871..206075 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005705336.1
Preferred nameBUD7
PFAMsChAPs
Max annot lvl2759|Eukaryota
KEGG koko:K19881
GOsGO:0000271,GO:0000278,GO:0000281,GO:0000282,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005798,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006030,GO:0006031,GO:0006037,GO:0006038,GO:0006040,GO:0006807,GO:0006810,GO:0006892,GO:0006893,GO:0006896,GO:0007034,GO:0007049,GO:0007163,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009272,GO:0009987,GO:0010383,GO:0012505,GO:0015031,GO:0015833,GO:0016051,GO:0016192,GO:0017144,GO:0019899,GO:0022402,GO:0030010,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0031267,GO:0031410,GO:0031982,GO:0032991,GO:0033036,GO:0033692,GO:0034044,GO:0034221,GO:0034613,GO:0034637,GO:0034645,GO:0042546,GO:0042886,GO:0043001,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046349,GO:0046907,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051278,GO:0051301,GO:0051641,GO:0051649,GO:0061640,GO:0061951,GO:0070589,GO:0070592,GO:0070727,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071966,GO:0072657,GO:0072659,GO:0090150,GO:0097708,GO:0098876,GO:1901071,GO:1901073,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903047,GO:1990778
Evalue4.17e-55
EggNOG OGs28K5Y@1|root,2QSKI@2759|Eukaryota
Descriptionfungal-type cell wall chitin biosynthetic process
COG categoryS
BRITEko00000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6691Ggra6691Gracilaria gracilis GNS1m malegenetig00000056_pilon 203871..206075 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1Ggra6691.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 203871..206075 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1.start1Ggra6691.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 203871..203873 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1.CDS1Ggra6691.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 203871..204270 +
Ggra6691.t1.CDS2Ggra6691.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000056_pilon 204664..206075 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1.exon1Ggra6691.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 203871..204270 +
Ggra6691.t1.exon2Ggra6691.t1.exon2Gracilaria gracilis GNS1m maleexontig00000056_pilon 204664..206075 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1.intron1Ggra6691.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000056_pilon 204271..204663 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6691.t1.stop1Ggra6691.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 206073..206075 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6691.t1 ID=Ggra6691.t1|Name=Ggra6691.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=604bp
MPSATRAEALVGIQEVSDKPHPDISDSLPDALAARAHLIHKFPPMGPPDM
VYLRKHYVPVVGADKIYGYYHFVRGAQPSGLANISAYIVDIVRNNGLDPL
PWVAAGAWEIVSATFVAFNIISKIDVKVHVDFPARLSGDLERADEIVDEL
IATNQDSDLAWMERTHILRAKGDLTKALEAARAAAAIATDDLDACVLVAD
IYVDLKEHTKSFEFLNDADVPTPPLDAFLRHLIPNRRNLTKPSDGALRAP
DAVRVLADRLREEKQLSTEKTDETLHELPAKLMTTTEKKCYQVLVKILND
LSWDEMLAVRGQCFVMEKDIEDGNLSMSDEEESIEDAPVDGGEAEDVTQG
ITTISLNDDTEEDDGQEQRGDTDSVEARKRTLEKTGKKVCKPWLDYLVTN
MYHDLKAMAMWNAEEQHHSTESSFPASSTTSEVDGEPVASTRDVEAQESE
HTFQRTADEIVKETKRPYADWMRRGELALRLGKPEEAKIAFWACLKLAEK
EKSVSVTSLCRLIEKASDEGDVRTTIRCVDTLWSYLDSKTKKKESFEPSQ
AVPVAQKSVFRLISKKGLKAVREAVSSGLDVNRKRLDGLLLDSVALRVDG
FLR*
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spliced messenger RNA

>Ggra6691.t1 ID=Ggra6691.t1|Name=Ggra6691.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1812bp|location=Sequence derived from alignment at tig00000056_pilon:203871..206075+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGTCTGCCACAAGAGCCGAGGCTTTGGTCGGCATCCAGGAGGTGAG
CGACAAACCTCACCCGGATATCTCCGACTCCTTGCCCGATGCACTTGCAG
CCCGCGCCCATCTCATCCACAAGTTCCCCCCGATGGGACCGCCGGACATG
GTGTATCTGCGAAAACACTACGTTCCTGTTGTAGGTGCCGATAAGATCTA
CGGCTACTACCACTTTGTCAGGGGCGCTCAGCCGTCCGGTCTTGCTAATA
TATCTGCTTACATCGTCGACATTGTGCGAAACAATGGGCTAGATCCCTTG
CCTTGGGTTGCGGCTGGAGCATGGGAAATTGTATCTGCAACTTTTGTTGC
TTTCAATATCATTTCTAAGATCGATGTCAaggttcacgttgattttccgg
ctcgactgagcggtgatttggaacgcgcggatgagatcgtTGACGAACTT
ATTGCCACAAATCAAGACAGTGACCTTGCGTGGATGGAAAGAACGCATAT
CCTTCGAGCAAAAGGTGATTTGACGAAAGCTTTAGAAGCGGCGAGGGCTG
CGGCAGCCATCGCCACGGACGACCTCGATGCTTGCGTATTGGTCGCTGAT
ATATACGTTGATCTCAAGGAACACACAAAGTCTTTCGAGTTCCTGAATGA
CGCGGATGTACCAACTCCTCCTTTGGATGCATTCTTGCGACATCTTATTC
CCAACAGAAGGAATCTTACTAAGCCTAGTGATGGCGCATTGAGAGCACCC
GATGCTGTTCGAGTTCTTGCTGATCGTCTTCGAGAAGAAAAGCAGTTGAG
CACAGAGAAGACTGATGAAACATTGCATGAACTCCCGGCGAAGTTGATGA
CCACGACTGAGAAAAAATGTTATCAAGTACTCGTGAAGATACTAAATGAT
CTTTCATGGGATGAAATGCTAGCGGTGAGAGGGCAATGCTTTGTTATGGA
GAAGGATATCGAAGATGGTAACCTGAGCATGTCAGACGAAGAAGAAAGTA
TAGAAGATGCACCTGTTGATGGGGGGGAAGCTGAGGATGTTACTCAGGGT
ATTACAACCATATCTCTAAACGACGATACCGAGGAAGATGATGGCCAAGA
GCAAAGAGGAGATACAGATAGTGTAGAAGCACGGAAGAGAACTCTGGAAA
AGACAGGAAAGAAGGTATGCAAGCCGTGGCTAGATTACCTGGTTACAAAT
ATGTATCATGACCTCAAAGCAATGGCAATGTGGAATGCTGAAGAGCAGCA
CCACTCCACCGAGTCGTCGTTCCCGGCTTCTTCTACCACGTCCGAGGTTG
ACGGAGAACCTGTGGCCTCGACCAGAGACGTTGAAGCGCAAGAGTCTGAG
CACACATTTCAGCGTACCGCAGATGAAATTGTTAAGGAAACAAAGCGGCC
GTACGCGGATTGGATGAGAAGGGGGGAACTAGCACTGAGACTGGGTAAAC
CAGAAGAGGCGAAAATTGCCTTCTGGGCTTGTCTTAAGCTAGCCGAGAAA
GAGAAGAGTGTTAGTGTAACTTCTCTTTGTCGACTAATCGAAAAGGCGTC
GGATGAAGGGGACGTGAGGACAACTATACGTTGCGTAGACACGCTATGGA
GCTATCTTGACTCAAAGACGAAGAAAAAAGAAAGCTTTGAACCCAGCCAG
GCAGTTCCTGTTGCCCAGAAGTCCGTCTTCAGATTAATCTCAAAGAAAGG
CTTGAAAGCCGTTCGTGAAGCAGTAAGCTCGGGGTTAGATGTTAACCGAA
AGCGTCTAGATGGCCTTCTGCTTGATTCGGTCGCTCTCAGGGTTGACGGC
TTTTTGCGATGA
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protein sequence of Ggra6691.t1

>Ggra6691.t1 ID=Ggra6691.t1|Name=Ggra6691.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=604bp
MPSATRAEALVGIQEVSDKPHPDISDSLPDALAARAHLIHKFPPMGPPDM
VYLRKHYVPVVGADKIYGYYHFVRGAQPSGLANISAYIVDIVRNNGLDPL
PWVAAGAWEIVSATFVAFNIISKIDVKVHVDFPARLSGDLERADEIVDEL
IATNQDSDLAWMERTHILRAKGDLTKALEAARAAAAIATDDLDACVLVAD
IYVDLKEHTKSFEFLNDADVPTPPLDAFLRHLIPNRRNLTKPSDGALRAP
DAVRVLADRLREEKQLSTEKTDETLHELPAKLMTTTEKKCYQVLVKILND
LSWDEMLAVRGQCFVMEKDIEDGNLSMSDEEESIEDAPVDGGEAEDVTQG
ITTISLNDDTEEDDGQEQRGDTDSVEARKRTLEKTGKKVCKPWLDYLVTN
MYHDLKAMAMWNAEEQHHSTESSFPASSTTSEVDGEPVASTRDVEAQESE
HTFQRTADEIVKETKRPYADWMRRGELALRLGKPEEAKIAFWACLKLAEK
EKSVSVTSLCRLIEKASDEGDVRTTIRCVDTLWSYLDSKTKKKESFEPSQ
AVPVAQKSVFRLISKKGLKAVREAVSSGLDVNRKRLDGLLLDSVALRVDG
FLR*
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mRNA from alignment at tig00000056_pilon:203871..206075+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6691.t1 ID=Ggra6691.t1|Name=Ggra6691.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2205bp|location=Sequence derived from alignment at tig00000056_pilon:203871..206075+ (Gracilaria gracilis GNS1m male)
ATGCCGTCTGCCACAAGAGCCGAGGCTTTGGTCGGCATCCAGGAGGTGAG
CGACAAACCTCACCCGGATATCTCCGACTCCTTGCCCGATGCACTTGCAG
CCCGCGCCCATCTCATCCACAAGTTCCCCCCGATGGGACCGCCGGACATG
GTGTATCTGCGAAAACACTACGTTCCTGTTGTAGGTGCCGATAAGATCTA
CGGCTACTACCACTTTGTCAGGGGCGCTCAGCCGTCCGGTCTTGCTAATA
TATCTGCTTACATCGTCGACATTGTGCGAAACAATGGGCTAGATCCCTTG
CCTTGGGTTGCGGCTGGAGCATGGGAAATTGTATCTGCAACTTTTGTTGC
TTTCAATATCATTTCTAAGATCGATGTCAaggttcacgttgattttccgg
gtagcactaccgcctctgctgtcgatggtgctggcaatgatattgagctc
aatgagtctatctggcaggagctgcttgtaagttctgttattcgcgatat
gtcatcgagcggagaaaagcctttgtatccttgcttgcgcgtcatatctc
cgccctcactcggagtcgatggcccctttctcgaagctgcgaaggaatgt
tgcgcacgttggcatctttcagggcgtgatacctcagagcaaaaaacaac
atctccagcaaagtccagaattgctgttaccattcgtgatcactttatcg
aatctgcgctgtatgagactgctattgagttctttactgatcaacgcctg
tgcgatgaggacaaagattttgcggtttacgcggccactgcagctcgact
gagcggtgatttggaacgcgcggatgagatcgtTGACGAACTTATTGCCA
CAAATCAAGACAGTGACCTTGCGTGGATGGAAAGAACGCATATCCTTCGA
GCAAAAGGTGATTTGACGAAAGCTTTAGAAGCGGCGAGGGCTGCGGCAGC
CATCGCCACGGACGACCTCGATGCTTGCGTATTGGTCGCTGATATATACG
TTGATCTCAAGGAACACACAAAGTCTTTCGAGTTCCTGAATGACGCGGAT
GTACCAACTCCTCCTTTGGATGCATTCTTGCGACATCTTATTCCCAACAG
AAGGAATCTTACTAAGCCTAGTGATGGCGCATTGAGAGCACCCGATGCTG
TTCGAGTTCTTGCTGATCGTCTTCGAGAAGAAAAGCAGTTGAGCACAGAG
AAGACTGATGAAACATTGCATGAACTCCCGGCGAAGTTGATGACCACGAC
TGAGAAAAAATGTTATCAAGTACTCGTGAAGATACTAAATGATCTTTCAT
GGGATGAAATGCTAGCGGTGAGAGGGCAATGCTTTGTTATGGAGAAGGAT
ATCGAAGATGGTAACCTGAGCATGTCAGACGAAGAAGAAAGTATAGAAGA
TGCACCTGTTGATGGGGGGGAAGCTGAGGATGTTACTCAGGGTATTACAA
CCATATCTCTAAACGACGATACCGAGGAAGATGATGGCCAAGAGCAAAGA
GGAGATACAGATAGTGTAGAAGCACGGAAGAGAACTCTGGAAAAGACAGG
AAAGAAGGTATGCAAGCCGTGGCTAGATTACCTGGTTACAAATATGTATC
ATGACCTCAAAGCAATGGCAATGTGGAATGCTGAAGAGCAGCACCACTCC
ACCGAGTCGTCGTTCCCGGCTTCTTCTACCACGTCCGAGGTTGACGGAGA
ACCTGTGGCCTCGACCAGAGACGTTGAAGCGCAAGAGTCTGAGCACACAT
TTCAGCGTACCGCAGATGAAATTGTTAAGGAAACAAAGCGGCCGTACGCG
GATTGGATGAGAAGGGGGGAACTAGCACTGAGACTGGGTAAACCAGAAGA
GGCGAAAATTGCCTTCTGGGCTTGTCTTAAGCTAGCCGAGAAAGAGAAGA
GTGTTAGTGTAACTTCTCTTTGTCGACTAATCGAAAAGGCGTCGGATGAA
GGGGACGTGAGGACAACTATACGTTGCGTAGACACGCTATGGAGCTATCT
TGACTCAAAGACGAAGAAAAAAGAAAGCTTTGAACCCAGCCAGGCAGTTC
CTGTTGCCCAGAAGTCCGTCTTCAGATTAATCTCAAAGAAAGGCTTGAAA
GCCGTTCGTGAAGCAGTAAGCTCGGGGTTAGATGTTAACCGAAAGCGTCT
AGATGGCCTTCTGCTTGATTCGGTCGCTCTCAGGGTTGACGGCTTTTTGC
GATGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:203871..206075+

>Ggra6691.t1 ID=Ggra6691.t1|Name=Ggra6691.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1812bp|location=Sequence derived from alignment at tig00000056_pilon:203871..206075+ (Gracilaria gracilis GNS1m male)
ATGCCGTCTGCCACAAGAGCCGAGGCTTTGGTCGGCATCCAGGAGGTGAG
CGACAAACCTCACCCGGATATCTCCGACTCCTTGCCCGATGCACTTGCAG
CCCGCGCCCATCTCATCCACAAGTTCCCCCCGATGGGACCGCCGGACATG
GTGTATCTGCGAAAACACTACGTTCCTGTTGTAGGTGCCGATAAGATCTA
CGGCTACTACCACTTTGTCAGGGGCGCTCAGCCGTCCGGTCTTGCTAATA
TATCTGCTTACATCGTCGACATTGTGCGAAACAATGGGCTAGATCCCTTG
CCTTGGGTTGCGGCTGGAGCATGGGAAATTGTATCTGCAACTTTTGTTGC
TTTCAATATCATTTCTAAGATCGATGTCAaggttcacgttgattttccgg
ctcgactgagcggtgatttggaacgcgcggatgagatcgtTGACGAACTT
ATTGCCACAAATCAAGACAGTGACCTTGCGTGGATGGAAAGAACGCATAT
CCTTCGAGCAAAAGGTGATTTGACGAAAGCTTTAGAAGCGGCGAGGGCTG
CGGCAGCCATCGCCACGGACGACCTCGATGCTTGCGTATTGGTCGCTGAT
ATATACGTTGATCTCAAGGAACACACAAAGTCTTTCGAGTTCCTGAATGA
CGCGGATGTACCAACTCCTCCTTTGGATGCATTCTTGCGACATCTTATTC
CCAACAGAAGGAATCTTACTAAGCCTAGTGATGGCGCATTGAGAGCACCC
GATGCTGTTCGAGTTCTTGCTGATCGTCTTCGAGAAGAAAAGCAGTTGAG
CACAGAGAAGACTGATGAAACATTGCATGAACTCCCGGCGAAGTTGATGA
CCACGACTGAGAAAAAATGTTATCAAGTACTCGTGAAGATACTAAATGAT
CTTTCATGGGATGAAATGCTAGCGGTGAGAGGGCAATGCTTTGTTATGGA
GAAGGATATCGAAGATGGTAACCTGAGCATGTCAGACGAAGAAGAAAGTA
TAGAAGATGCACCTGTTGATGGGGGGGAAGCTGAGGATGTTACTCAGGGT
ATTACAACCATATCTCTAAACGACGATACCGAGGAAGATGATGGCCAAGA
GCAAAGAGGAGATACAGATAGTGTAGAAGCACGGAAGAGAACTCTGGAAA
AGACAGGAAAGAAGGTATGCAAGCCGTGGCTAGATTACCTGGTTACAAAT
ATGTATCATGACCTCAAAGCAATGGCAATGTGGAATGCTGAAGAGCAGCA
CCACTCCACCGAGTCGTCGTTCCCGGCTTCTTCTACCACGTCCGAGGTTG
ACGGAGAACCTGTGGCCTCGACCAGAGACGTTGAAGCGCAAGAGTCTGAG
CACACATTTCAGCGTACCGCAGATGAAATTGTTAAGGAAACAAAGCGGCC
GTACGCGGATTGGATGAGAAGGGGGGAACTAGCACTGAGACTGGGTAAAC
CAGAAGAGGCGAAAATTGCCTTCTGGGCTTGTCTTAAGCTAGCCGAGAAA
GAGAAGAGTGTTAGTGTAACTTCTCTTTGTCGACTAATCGAAAAGGCGTC
GGATGAAGGGGACGTGAGGACAACTATACGTTGCGTAGACACGCTATGGA
GCTATCTTGACTCAAAGACGAAGAAAAAAGAAAGCTTTGAACCCAGCCAG
GCAGTTCCTGTTGCCCAGAAGTCCGTCTTCAGATTAATCTCAAAGAAAGG
CTTGAAAGCCGTTCGTGAAGCAGTAAGCTCGGGGTTAGATGTTAACCGAA
AGCGTCTAGATGGCCTTCTGCTTGATTCGGTCGCTCTCAGGGTTGACGGC
TTTTTGCGATGA
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