Ggra6325.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6325.t1
Unique NameGgra6325.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length146
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:116309..116746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6325Ggra6325Gracilaria gracilis GNS1m malegenetig00000096_pilon 116309..116746 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6325.t1.start1Ggra6325.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000096_pilon 116309..116311 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6325.t1.CDS1Ggra6325.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000096_pilon 116309..116746 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6325.t1.exon1Ggra6325.t1.exon1Gracilaria gracilis GNS1m maleexontig00000096_pilon 116309..116746 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6325.t1.stop1Ggra6325.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000096_pilon 116744..116746 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6325.t1Ggra6325.t1Gracilaria gracilis GNS1m malepolypeptidetig00000096_pilon 116309..116746 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6325.t1 ID=Ggra6325.t1|Name=Ggra6325.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=146bp
MQASTGMFLIENDFDFQKTFRNGVTWLREDQEKKFFELVQDDLRLRRART
CDLDKLNAEEGMLLKEWTENIEQWFEALKKQDNECEKEDAKSKIRSFLLP
STPWMRKIICDLVRTRHPRLAAQTVPTQDGNKMLNLSLIANLSVK*
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spliced messenger RNA

>Ggra6325.t1 ID=Ggra6325.t1|Name=Ggra6325.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=438bp|location=Sequence derived from alignment at tig00000096_pilon:116309..116746+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGGCGTCTACTGGTATGTTTCTGATTGAGAATGACTTCGATTTTCA
AAAAACGTTTAGGAACGGTGTAACATGGTTGCGAGAGGACCAAGAAAAGA
AGTTCTTCGAACTCGTACAGGACGATTTGCGCCTGAGAAGAGCGAGAACA
TGTGACTTGGACAAGTTGAACGCAGAAGAGGGTATGCTATTGAAGGAATG
GACCGAGAACATCGAACAGTGGTTTGAGGCTTTGAAGAAGCAGGACAATG
AATGTGAAAAGGAAGATGCAAAGTCAAAGATCCGATCATTTTTGCTTCCG
TCAACGCCATGGATGAGGAAAATCATATGTGATTTAGTGCGAACGCGGCA
CCCTCGACTTGCTGCCCAAACTGTTCCAACGCAGGATGGCAACAAGATGT
TGAATTTGTCTCTAATCGCAAACTTAAGCGTAAAGTAG
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protein sequence of Ggra6325.t1

>Ggra6325.t1 ID=Ggra6325.t1|Name=Ggra6325.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=146bp
MQASTGMFLIENDFDFQKTFRNGVTWLREDQEKKFFELVQDDLRLRRART
CDLDKLNAEEGMLLKEWTENIEQWFEALKKQDNECEKEDAKSKIRSFLLP
STPWMRKIICDLVRTRHPRLAAQTVPTQDGNKMLNLSLIANLSVK*
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mRNA from alignment at tig00000096_pilon:116309..116746+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6325.t1 ID=Ggra6325.t1|Name=Ggra6325.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=438bp|location=Sequence derived from alignment at tig00000096_pilon:116309..116746+ (Gracilaria gracilis GNS1m male)
ATGCAGGCGTCTACTGGTATGTTTCTGATTGAGAATGACTTCGATTTTCA
AAAAACGTTTAGGAACGGTGTAACATGGTTGCGAGAGGACCAAGAAAAGA
AGTTCTTCGAACTCGTACAGGACGATTTGCGCCTGAGAAGAGCGAGAACA
TGTGACTTGGACAAGTTGAACGCAGAAGAGGGTATGCTATTGAAGGAATG
GACCGAGAACATCGAACAGTGGTTTGAGGCTTTGAAGAAGCAGGACAATG
AATGTGAAAAGGAAGATGCAAAGTCAAAGATCCGATCATTTTTGCTTCCG
TCAACGCCATGGATGAGGAAAATCATATGTGATTTAGTGCGAACGCGGCA
CCCTCGACTTGCTGCCCAAACTGTTCCAACGCAGGATGGCAACAAGATGT
TGAATTTGTCTCTAATCGCAAACTTAAGCGTAAAGTAG
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Coding sequence (CDS) from alignment at tig00000096_pilon:116309..116746+

>Ggra6325.t1 ID=Ggra6325.t1|Name=Ggra6325.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=438bp|location=Sequence derived from alignment at tig00000096_pilon:116309..116746+ (Gracilaria gracilis GNS1m male)
ATGCAGGCGTCTACTGGTATGTTTCTGATTGAGAATGACTTCGATTTTCA
AAAAACGTTTAGGAACGGTGTAACATGGTTGCGAGAGGACCAAGAAAAGA
AGTTCTTCGAACTCGTACAGGACGATTTGCGCCTGAGAAGAGCGAGAACA
TGTGACTTGGACAAGTTGAACGCAGAAGAGGGTATGCTATTGAAGGAATG
GACCGAGAACATCGAACAGTGGTTTGAGGCTTTGAAGAAGCAGGACAATG
AATGTGAAAAGGAAGATGCAAAGTCAAAGATCCGATCATTTTTGCTTCCG
TCAACGCCATGGATGAGGAAAATCATATGTGATTTAGTGCGAACGCGGCA
CCCTCGACTTGCTGCCCAAACTGTTCCAACGCAGGATGGCAACAAGATGT
TGAATTTGTCTCTAATCGCAAACTTAAGCGTAAAGTAG
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