Ggra6312.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6312.t1
Unique NameGgra6312.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length240
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:43052..43771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6312Ggra6312Gracilaria gracilis GNS1m malegenetig00000096_pilon 43052..43771 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6312.t1.start1Ggra6312.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000096_pilon 43052..43054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6312.t1.CDS1Ggra6312.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000096_pilon 43052..43771 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6312.t1.exon1Ggra6312.t1.exon1Gracilaria gracilis GNS1m maleexontig00000096_pilon 43052..43771 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6312.t1.stop1Ggra6312.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000096_pilon 43769..43771 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6312.t1Ggra6312.t1Gracilaria gracilis GNS1m malepolypeptidetig00000096_pilon 43052..43771 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6312.t1 ID=Ggra6312.t1|Name=Ggra6312.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=240bp
MRMWLQVTLVCLLVYRAHAGETVWTTRTQSYPDAAAAATEEPQPTPEATP
SPSPAAAGAPSRWALLESSLHSVPPQMMSKVQTAVNVATASHCHPSLCFA
LHGSSSLSAADFRMQKEFVKLVSAIVALDERTAFAAVLYDRRVRRVARKS
TRVERFLTRVNRVQRRCPCDAEVNVTGVVGRCAWELRRGGGDGVRKMVLF
GGAASTCAACAWAPKAPVTAAEAATATCSPCAAGTTWWT*
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spliced messenger RNA

>Ggra6312.t1 ID=Ggra6312.t1|Name=Ggra6312.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=720bp|location=Sequence derived from alignment at tig00000096_pilon:43052..43771+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCATGTGGTTGCAAGTGACGCTGGTTTGCTTGCTGGTGTACCGCGC
ACACGCGGGTGAAACCGTATGGACGACGCGCACGCAATCGTACCCAGACG
CCGCCGCAGCGGCGACAGAAGAGCCACAACCCACGCCAGAAGCAACGCCC
TCGCCGTCGCCAGCCGCCGCAGGCGCGCCCAGTCGGTGGGCGCTGCTCGA
GTCCTCACTACACTCCGTGCCGCCGCAAATGATGTCCAAGGTACAAACGG
CCGTGAACGTCGCAACAGCCAGCCACTGTCACCCCTCGCTGTGCTTCGCA
CTCCACGGCAGCTCCTCTCTGTCCGCGGCCGACTTCCGCATGCAGAAGGA
GTTCGTCAAGCTGGTGTCCGCCATCGTCGCGCTGGACGAACGCACCGCGT
TCGCAGCCGTGCTGTACGACCGCCGCGTGCGGCGCGTGGCCAGGAAGTCG
ACGCGCGTGGAACGCTTCTTGACCAGGGTGAATCGGGTGCAGAGACGGTG
CCCGTGTGACGCGGAGGTTAATGTGACGGGCGTGGTTGGACGCTGCGCGT
GGGAGTTGAGGAGGGGCGGTGGCGATGGCGTGCGGAAGATGGTGCTGTTT
GGCGGCGCGGCGTCGACGTGTGCGGCGTGCGCGTGGGCGCCGAAGGCGCC
GGTGACGGCGGCGGAGGCGGCGACGGCGACGTGCTCGCCGTGCGCAGCTG
GTACCACCTGGTGGACGTGA
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protein sequence of Ggra6312.t1

>Ggra6312.t1 ID=Ggra6312.t1|Name=Ggra6312.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=240bp
MRMWLQVTLVCLLVYRAHAGETVWTTRTQSYPDAAAAATEEPQPTPEATP
SPSPAAAGAPSRWALLESSLHSVPPQMMSKVQTAVNVATASHCHPSLCFA
LHGSSSLSAADFRMQKEFVKLVSAIVALDERTAFAAVLYDRRVRRVARKS
TRVERFLTRVNRVQRRCPCDAEVNVTGVVGRCAWELRRGGGDGVRKMVLF
GGAASTCAACAWAPKAPVTAAEAATATCSPCAAGTTWWT*
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mRNA from alignment at tig00000096_pilon:43052..43771+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6312.t1 ID=Ggra6312.t1|Name=Ggra6312.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=720bp|location=Sequence derived from alignment at tig00000096_pilon:43052..43771+ (Gracilaria gracilis GNS1m male)
ATGCGCATGTGGTTGCAAGTGACGCTGGTTTGCTTGCTGGTGTACCGCGC
ACACGCGGGTGAAACCGTATGGACGACGCGCACGCAATCGTACCCAGACG
CCGCCGCAGCGGCGACAGAAGAGCCACAACCCACGCCAGAAGCAACGCCC
TCGCCGTCGCCAGCCGCCGCAGGCGCGCCCAGTCGGTGGGCGCTGCTCGA
GTCCTCACTACACTCCGTGCCGCCGCAAATGATGTCCAAGGTACAAACGG
CCGTGAACGTCGCAACAGCCAGCCACTGTCACCCCTCGCTGTGCTTCGCA
CTCCACGGCAGCTCCTCTCTGTCCGCGGCCGACTTCCGCATGCAGAAGGA
GTTCGTCAAGCTGGTGTCCGCCATCGTCGCGCTGGACGAACGCACCGCGT
TCGCAGCCGTGCTGTACGACCGCCGCGTGCGGCGCGTGGCCAGGAAGTCG
ACGCGCGTGGAACGCTTCTTGACCAGGGTGAATCGGGTGCAGAGACGGTG
CCCGTGTGACGCGGAGGTTAATGTGACGGGCGTGGTTGGACGCTGCGCGT
GGGAGTTGAGGAGGGGCGGTGGCGATGGCGTGCGGAAGATGGTGCTGTTT
GGCGGCGCGGCGTCGACGTGTGCGGCGTGCGCGTGGGCGCCGAAGGCGCC
GGTGACGGCGGCGGAGGCGGCGACGGCGACGTGCTCGCCGTGCGCAGCTG
GTACCACCTGGTGGACGTGA
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Coding sequence (CDS) from alignment at tig00000096_pilon:43052..43771+

>Ggra6312.t1 ID=Ggra6312.t1|Name=Ggra6312.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=720bp|location=Sequence derived from alignment at tig00000096_pilon:43052..43771+ (Gracilaria gracilis GNS1m male)
ATGCGCATGTGGTTGCAAGTGACGCTGGTTTGCTTGCTGGTGTACCGCGC
ACACGCGGGTGAAACCGTATGGACGACGCGCACGCAATCGTACCCAGACG
CCGCCGCAGCGGCGACAGAAGAGCCACAACCCACGCCAGAAGCAACGCCC
TCGCCGTCGCCAGCCGCCGCAGGCGCGCCCAGTCGGTGGGCGCTGCTCGA
GTCCTCACTACACTCCGTGCCGCCGCAAATGATGTCCAAGGTACAAACGG
CCGTGAACGTCGCAACAGCCAGCCACTGTCACCCCTCGCTGTGCTTCGCA
CTCCACGGCAGCTCCTCTCTGTCCGCGGCCGACTTCCGCATGCAGAAGGA
GTTCGTCAAGCTGGTGTCCGCCATCGTCGCGCTGGACGAACGCACCGCGT
TCGCAGCCGTGCTGTACGACCGCCGCGTGCGGCGCGTGGCCAGGAAGTCG
ACGCGCGTGGAACGCTTCTTGACCAGGGTGAATCGGGTGCAGAGACGGTG
CCCGTGTGACGCGGAGGTTAATGTGACGGGCGTGGTTGGACGCTGCGCGT
GGGAGTTGAGGAGGGGCGGTGGCGATGGCGTGCGGAAGATGGTGCTGTTT
GGCGGCGCGGCGTCGACGTGTGCGGCGTGCGCGTGGGCGCCGAAGGCGCC
GGTGACGGCGGCGGAGGCGGCGACGGCGACGTGCTCGCCGTGCGCAGCTG
GTACCACCTGGTGGACGTGA
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