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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1173028.ANKO01000014_gene1060 |
| PFAMs | VWA_2 |
| Max annot lvl | 1117|Cyanobacteria |
| Evalue | 1.13e-14 |
| EggNOG OGs | COG2304@1|root,COG2304@2|Bacteria,1GD1R@1117|Cyanobacteria |
| Description | von Willebrand factor (vWF) type A domain |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6257.t1.stop1 | Ggra6257.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000879_pilon 339648..339650 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6257.t1.intron1 | Ggra6257.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000879_pilon 340822..345077 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6257.t1.start1 | Ggra6257.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000879_pilon 345278..345280 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra6257.t1 ID=Ggra6257.t1|Name=Ggra6257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=459bp MVKKGTRKACKGLTSLGCNFEKCETSEGEKGWTCVGGNPDDSGDSDDPGD LEECPATCRSNREEVENERGACHFDENDALKDCNYDTSGFYGCGIQRCDL PAGRGYRCGYITYEDGDTINIEQPAVGHVFSFKALVKNPPTLFEDIYFLS DATSSMALDMETAKEKLRDIVSKRLAAGETPFGGQTFLPSVELPSVTRRF GIGIFRDETELENGFQNVQSMTDDTSSILSAIDSIEATGGSGGAEANLVA LYKVATDESIGWREDSRKLVVYFGDFPGHEPSCVEGLTITRDTVIDAIIA KRIHIIAVNFGSDVTADNDDSKGFNSAAESFGCGVSEMSDSRQANEIAFK TAGETVSKTDQSDLVSSIYLYMSSSPNGIRPTKSCEPYLQGPELSSSSWS FGNIETLRFEQFTVTSQMCDLPTTSLECKYEYTIDYSPTARSKVVAVINV KVDNVQGC* back to topspliced messenger RNA >Ggra6257.t1 ID=Ggra6257.t1|Name=Ggra6257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1377bp|location=Sequence derived from alignment at tig00000879_pilon:339648..345280- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGTCAAGAAGGGTACTAGGAAGGCCTGCAAAGGACTAACCTCTTTGGG ATGTAATTTCGAAAAGTGTGAAACAAGTGAAGGAGAAAAGGGCTGGACCT GTGTTGGAGGCAATCCCGACGATTCTGGAGATTCCGACGACCCTGGAGAT CTGGAAGAATGCCCTGCGACCTGTAGGAGCAACAGGGAGGAAGTAGAGAA CGAACGCGGTGCTTGCCACTTTGACGAAAACGATGCTCTCAAGGACTGCA ACTACGACACCTCAGGATTCTATGGCTGTGGAATACAGAGATGTGATTTG CCGGCGGGTCGAGGATATAGATGCGGTTACATTACGTATGAAGACGGGGA TACAATTAATATAGAGCAACCGGCGGTTGGTCACGTGTTTAGTTTCAAGG CTCTTGTCAAAAACCCGCCAACACTCTTTGAAGACATTTATTTTCTCTCG GACGCGACTTCTTCAATGGCTTTGGACATGGAAACAGCGAAAGAGAAGCT CAGGGATATTGTAAGTAAGCGCTTAGCTGCAGGGGAAACACCTTTTGGAG GCCAAACATTCCTACCATCAGTAGAGCTTCCGTCAGTTACTAGACGATTT GGAATCGGAATCTTTCGAGATGAGACAGAATTGGAGAATGGTTTCCAGAA CGTTCAGAGTATGACGGATGACACGAGCAGTATACTAAGCGCAATCGATT CAATAGAGGCAACTGGTGGAAGCGGTGGGGCAGAAGCTAATTTGGTGGCT TTGTACAAAGTTGCAACGGACGAAAGCATTGGATGGCGAGAAGATTCGCG CAAACTTGTGGTATACTTTGGAGATTTCCCTGGACACGAGCCGAGCTGCG TCGAAGGCCTAACGATTACGAGAGACACGGTGATTGATGCAATTATTGCA AAGCGCATCCATATTATTGCGGTCAACTTTGGAAGCGATGTAACGGCAGA TAACGATGATTCAAAGGGGTTCAATAGTGCCGCAGAGAGCTTTGGGTGTG GAGTTTCAGAGATGTCGGACTCGAGGCAAGCAAATGAAATTGCATTTAAA ACGGCAGGGGAAACAGTGTCAAAGACAGACCAGAGTGATCTGGTTTCTAG CATCTATTTGTACATGTCAAGTTCTCCCAATGGCATACGCCCTACAAAAA GTTGTGAACCATATCTCCAAGGACCTGAGTTAAGTTCTTCTTCGTGGTCC TTTGGTAATATTGAGACACTACGTTTTGAACAATTTACTGTGACTTCACA AATGTGTGACCTACCCACCACCTCGCTGGAGTGCAAGTATGAATATACAA TTGATTACAGCCCAACAGCTAGATCGAAGGTTGTGGCTGTGATTAACGTG AAAGTTGACAATGTACAAGGATGTTAG back to topprotein sequence of Ggra6257.t1 >Ggra6257.t1 ID=Ggra6257.t1|Name=Ggra6257.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=459bp
MVKKGTRKACKGLTSLGCNFEKCETSEGEKGWTCVGGNPDDSGDSDDPGD LEECPATCRSNREEVENERGACHFDENDALKDCNYDTSGFYGCGIQRCDL PAGRGYRCGYITYEDGDTINIEQPAVGHVFSFKALVKNPPTLFEDIYFLS DATSSMALDMETAKEKLRDIVSKRLAAGETPFGGQTFLPSVELPSVTRRF GIGIFRDETELENGFQNVQSMTDDTSSILSAIDSIEATGGSGGAEANLVA LYKVATDESIGWREDSRKLVVYFGDFPGHEPSCVEGLTITRDTVIDAIIA KRIHIIAVNFGSDVTADNDDSKGFNSAAESFGCGVSEMSDSRQANEIAFK TAGETVSKTDQSDLVSSIYLYMSSSPNGIRPTKSCEPYLQGPELSSSSWS FGNIETLRFEQFTVTSQMCDLPTTSLECKYEYTIDYSPTARSKVVAVINV KVDNVQGC* back to topmRNA from alignment at tig00000879_pilon:339648..345280- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra6257.t1 ID=Ggra6257.t1|Name=Ggra6257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5633bp|location=Sequence derived from alignment at tig00000879_pilon:339648..345280- (Gracilaria gracilis GNS1m male) ATGGTCAAGAAGGGTACTAGGAAGGCCTGCAAAGGACTAACCTCTTTGGG
ATGTAATTTCGAAAAGTGTGAAACAAGTGAAGGAGAAAAGGGCTGGACCT
GTGTTGGAGGCAATCCCGACGATTCTGGAGATTCCGACGACCCTGGAGAT
CTGGAAGAATGCCCTGCGACCTGTAGGAGCAACAGGGAGGAAGTAGAGAA
CGAGTGCGAAGGGGCACTAGCTACTCGCCTTCCCGCGGTGTGCCTGTCTC
CATAACCCCGCGTAACACCGGGGGGAGCAAAACGAGTGAGCAAATGGGAC
TCCTACGGAGGCCAAAAACCTTGACGGGGACGTCAAAATCAAAAAATCTA
TCAACGATTCGTGTTCTTCAGCTGAACTGCCGAGGTCTTCTTCGCCCCAG
CAAACGAACCGAGATCGCCAAGCTAGCTGCTGATCACACTGTGGATCTGA
TTTGCTTGCAGGAAACATTTCTGATCGAAACAGATCAGGCCCCGAAGATC
GAAGGTTATGAAATAGTAGCCCGGTGCAACAGGCAATCGGGCTACACCAC
AGCAGGAGGAAGAGGCGGAGGGGTCGCAGTGTATCAGAAGGTCGGCTTGT
TTGCCGATGTCGTGGAAGAAGTTTCGCAAGTACCAGGAATCGAAAGGGCC
ACAGTCTCCTTACGGACCGCGAAAGGGTTACTGTCTGTCAGTACCATATA
CATCGCCCCTCCACTACGACACTCAAACTGGTACGAGGCGGTACCTGAGC
AACACATTATTTGCGCAGACTGTAATATTTGCGGGTCATGGTATCCCCAG
CGTGTAGAACTGTCGGGAACCGATATGGAAACCTTTCTAGACGAGAGTGG
ACGCCACATCGTGAACGAAAGTGGAATACCTACACAAACGGAGCCTTCTA
GTGGCACGCAAAGTGCGATTGACATAACTGCAGTACTCACTCGATGGCTC
GCATACAACTCATGGAAGGCAGTCGAAGAGCCATTCTCTGACCATCACCC
AATTTTCGTAACAATCGACGTGCCAACTCTGGAACAAAAAAGCGTGCCAC
GCTGGAGCCTCGACAAGGCGGACTGGAAACTGTACAAGAAAGAAGTAGAA
AAGCGGCTAACTCTAGAGCCAATTCAGACGGTTTGGGGTGTAGACAAAGA
AAATGAGGTGTTCACGCTCGCAATAACAGAGGCTGCATATGCTGCTGTAC
CGAAAGGAAGAAGGCGTCGTCGGACGCCATGGTTGTGTGAAGAGGCTTCC
ATTGCAATTGATGCCCGATCGAAAGCCTGGTCCGCGTGGCGTGAAAACCC
TTGTGAGGAAACGGCCACTAGCCTGCAACAAGTAAGAGTAGAAACCGCAA
GACAAAAAGACAAGCTGAAAAGAGAAAGTTGGAGAGACCTTGTAAGTGGT
CTACAACCCCAAACAGACGATTACAAACTGTGGCCGATACTTAAGGCCAT
GGACACTAGTAGAAGCACGACAAAGGCGATGTGCCCCCCAGGAGGACAAG
AGTGGACAGATATTGAACGTGCGAAGTAGTTTCTTCGCACCGAGAAAAGA
AAGGCAAGAACCCTGGGGAAGAATTTGTTTAGACGAAACCGGTATCGCAG
GGCTTTAAAAGGCTACGCAGTCAAAGCCTCGCAGGAGAACGCGCCTGTCT
TTGAAATGAAGCATCTCTTAGGAGTACTTCAGGACATGGACGAAAAGCGG
GCTTCAGGTCCCGACGAAGCGGAAATTGCTTTCCTAAGACGGCTCCCTGA
AACGGGGCTGTCTCGGCTTCTCCACCTCATCAACCGAACAATGATAGAAG
GTGCGACACCAAGCCAATGGCGAACGGCGACTCTTGTTCCTATCCCTAAG
CCTGGCGCCCGCGGCAAATTCCGTCCCATTTCCTTGACACCTGTTATCTC
GCGAACTGCCGAGCGGCTTGTGAACAAGATTTTTATGAAGTGGCTGGAGC
CGAAGCTTCCACCCGAACAAGCTGGTTTTCGAAAGAATCGAAACACGGAG
GAGCATATTGCAGCAATGACTCTTGGAATTACCAATGGTTGGGATGAAGG
AAAGCTGTCGCTGGCGACTTTTTGTGACTTCTCCAAGGCATATGACAGAG
TCCCCCATCATCTACTCTTCGCCAAGCTAAAAGATCTCAAATGCCCAACC
CATCTCTGGCGATGGCTTCGATCTTTCGTGATGGACAGAAAGTGGAAGTG
CCGGTGGAACTCAGCGGTCAGCGCCAAATTTTTGGTACGTCAAGGGCTCC
CACAAGGCGGCACGTTATCACCAGGCCTTTGGATCGCATTTATATACGAC
TTGCCATCGCACATTGCTCAGGTGGCCAGCTCGGTGAAAGTGAACCTCTT
CGCAGACGATACTACGTTATGGACAACCAAAAAACCCCCAGAGAAGTGTC
AAATGCGCCTTCAAGAGGCTCTTGTCGCGCTCGAGGCATACTGCGCGAAC
AATGGAATACTGCTGAATCCCTCAAAGACAGTGCTTGTGCCATTCACACT
GAGTCGGTGGCAAGAAGAGAAGGAAAGATACGCAGTAAAAGTGGGTGATT
CAACGGTCATGCCCAGCGAGTGTGCTCGCTTCTTGGGTGTCCTTTTGGAC
TCTCGACTTAACCTCAAAGCGCACCTAGACCTCGTAGCCGCCCGATACCA
AACACGCAACAGCCTCATGCGCTGCCTCACGCGTAAGAGTTGGGGGGCAG
ATTGGGATACAATGGACACCGTCCGAAAGGGCTTTGGAGAGCCGTTGGCC
GCGTACGGTGCTGGCTCAGTGATACCAAACGCTGTCAAATCAGGCATCGA
TTCTCTAGAGGTGGCCCGTAACGAGGCTGTCCGAATCCAAACCGGATGCC
TCTCCTCGACACCGATAGTGAAGTTGCGATCACTGGTCGAGCTCCCGGAT
ATGGTACAAATTGCGAAGGGAAAAGCGGCAGCTCTATTCGAGAAAACCAT
AAGACAGAGCACCGATACACCGCTTAAGCTCGAGCTATGCCGTGAGGTGA
AACCACGCGTCCGAAAATCACGGTCTACAGTGAAACGCATGGCGGAAAGG
TATCTGGCCGAGAAAGGCATCCTGCAACTCCCGCATAGAGAGCCGCTACC
ACAAGAGGTTGGAACGATATGTCTTTCAAGGGTAGTGTTTGAGAAAGCCC
TCTGCAGCAAAGTAGACCCCGAGAAAGTACAAGCAACGGAGACACAGGCA
CTTCTTTCCAGGCTGCCAACGTCCGATCACGACATCTGGTGCGATGGATC
AGTTGGAGTGTATGGTGGCAACCAGGAGGAATGGTCGAAAAGGGTAGTGG
TTCGATGGGAGGAGGGCTGGTATGCAGGAACCATAAACAGCGTTCCTGGC
TCCGGTGAATCTGTCGCCTGCGTCTCGCTGTATCGAAGACAGCAAAACTC
AGAACCAGACATCTGGATCCGTTATGACGACGAGTTTGAAATGGCTTATT
CGATTGAAGCTGAAAACTTTCTGCGTGACGCACAGGGACATAGTTTGGAG
TACATGGCGCTAAAACCGGAAAAGGTGGGCGCTGGCGCGTACGAATTACA
CTCGAAGGACACCATTGGTACAATAAGTGCTGTTATTCCGGCTGGAATCA
ACGTCAGCTCGTACACGGCTGAGCTGCGGGCCATGGACGCTGCACTCGAT
GCCGTACATGAAGAGGAGAATAAAACGATAAGGATCTTTACAGATTCCTT
AGCGTCGGTGCAGGCTTTACAAGGAAACATACGGTTGCAGAGCATAATCC
TTCAGCGTGTGGCCCAAAAGCTAGAACACATAAGCAGCAGTTGTAATGTC
TACCTCGCTTGGGTGCCGAGTCACTGCGGAGTTCCGCAAAATGAATCGGC
GGACGAAGTAGCCAAATCAGGTCTCAAGCTCCCACTTTCTTGGCAGATAA
ATGTCCCAGTTGACCTTATCGATGCAGTATCACAAGTGAGACACAGAACG
CAAAGCAAAAGTGTTTTGAACTTCAAAAAGTGCGATATGGCGGAAGAGAA
CGGTGTGAGGCTGTCAGAGGTGACTCTGGCGCAGTTTGCCACTGGACATG
TCCCAGCACTTCACCCCGTCAGCTCGTATCTAAACAAGAAGGTGCTGAGA
TGCGACTGCGGCACTAACGCCAAGAAAGACGTCGACCACGTTCTGTTTCG
CTGTCCACGAACAAACAGAGCTCGACGCGACGAATTGCCAGCGCCACGTG
AAAGAAAAGATAAATCCATGATAGATATGATTAAGGAGTGGCCGTTACGG
TTTTTGGCTTTTTTCAAGAGAGAGAACTACCTTTAGATTCGATCTGTAGA
TAGCTCTCCTGCCGCCTCGGAATCAGGGGCGGCTGACCACAGTAAAGAAG
AAGAAGAGTGCGAAGGATTCGAGGCAACTCGATGCCGGCTACGAACTTGT
TCTTTGGGAAACTCCCCCACCTACACATGTGATGTTCCTGTTGAAACGCG
GAGTTGCAGACGCGGTGCTTGCCACTTTGACGAAAACGATGCTCTCAAGG
ACTGCAACTACGACACCTCAGGATTCTATGGCTGTGGAATACAGAGATGT
GATTTGCCGGCGGGTCGAGGATATAGATGCGGTTACATTACGTATGAAGA
CGGGGATACAATTAATATAGAGCAACCGGCGGTTGGTCACGTGTTTAGTT
TCAAGGCTCTTGTCAAAAACCCGCCAACACTCTTTGAAGACATTTATTTT
CTCTCGGACGCGACTTCTTCAATGGCTTTGGACATGGAAACAGCGAAAGA
GAAGCTCAGGGATATTGTAAGTAAGCGCTTAGCTGCAGGGGAAACACCTT
TTGGAGGCCAAACATTCCTACCATCAGTAGAGCTTCCGTCAGTTACTAGA
CGATTTGGAATCGGAATCTTTCGAGATGAGACAGAATTGGAGAATGGTTT
CCAGAACGTTCAGAGTATGACGGATGACACGAGCAGTATACTAAGCGCAA
TCGATTCAATAGAGGCAACTGGTGGAAGCGGTGGGGCAGAAGCTAATTTG
GTGGCTTTGTACAAAGTTGCAACGGACGAAAGCATTGGATGGCGAGAAGA
TTCGCGCAAACTTGTGGTATACTTTGGAGATTTCCCTGGACACGAGCCGA
GCTGCGTCGAAGGCCTAACGATTACGAGAGACACGGTGATTGATGCAATT
ATTGCAAAGCGCATCCATATTATTGCGGTCAACTTTGGAAGCGATGTAAC
GGCAGATAACGATGATTCAAAGGGGTTCAATAGTGCCGCAGAGAGCTTTG
GGTGTGGAGTTTCAGAGATGTCGGACTCGAGGCAAGCAAATGAAATTGCA
TTTAAAACGGCAGGGGAAACAGTGTCAAAGACAGACCAGAGTGATCTGGT
TTCTAGCATCTATTTGTACATGTCAAGTTCTCCCAATGGCATACGCCCTA
CAAAAAGTTGTGAACCATATCTCCAAGGACCTGAGTTAAGTTCTTCTTCG
TGGTCCTTTGGTAATATTGAGACACTACGTTTTGAACAATTTACTGTGAC
TTCACAAATGTGTGACCTACCCACCACCTCGCTGGAGTGCAAGTATGAAT
ATACAATTGATTACAGCCCAACAGCTAGATCGAAGGTTGTGGCTGTGATT
AACGTGAAAGTTGACAATGTACAAGGATGTTAG back to topCoding sequence (CDS) from alignment at tig00000879_pilon:339648..345280- >Ggra6257.t1 ID=Ggra6257.t1|Name=Ggra6257.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1377bp|location=Sequence derived from alignment at tig00000879_pilon:339648..345280- (Gracilaria gracilis GNS1m male) ATGGTCAAGAAGGGTACTAGGAAGGCCTGCAAAGGACTAACCTCTTTGGG ATGTAATTTCGAAAAGTGTGAAACAAGTGAAGGAGAAAAGGGCTGGACCT GTGTTGGAGGCAATCCCGACGATTCTGGAGATTCCGACGACCCTGGAGAT CTGGAAGAATGCCCTGCGACCTGTAGGAGCAACAGGGAGGAAGTAGAGAA CGAACGCGGTGCTTGCCACTTTGACGAAAACGATGCTCTCAAGGACTGCA ACTACGACACCTCAGGATTCTATGGCTGTGGAATACAGAGATGTGATTTG CCGGCGGGTCGAGGATATAGATGCGGTTACATTACGTATGAAGACGGGGA TACAATTAATATAGAGCAACCGGCGGTTGGTCACGTGTTTAGTTTCAAGG CTCTTGTCAAAAACCCGCCAACACTCTTTGAAGACATTTATTTTCTCTCG GACGCGACTTCTTCAATGGCTTTGGACATGGAAACAGCGAAAGAGAAGCT CAGGGATATTGTAAGTAAGCGCTTAGCTGCAGGGGAAACACCTTTTGGAG GCCAAACATTCCTACCATCAGTAGAGCTTCCGTCAGTTACTAGACGATTT GGAATCGGAATCTTTCGAGATGAGACAGAATTGGAGAATGGTTTCCAGAA CGTTCAGAGTATGACGGATGACACGAGCAGTATACTAAGCGCAATCGATT CAATAGAGGCAACTGGTGGAAGCGGTGGGGCAGAAGCTAATTTGGTGGCT TTGTACAAAGTTGCAACGGACGAAAGCATTGGATGGCGAGAAGATTCGCG CAAACTTGTGGTATACTTTGGAGATTTCCCTGGACACGAGCCGAGCTGCG TCGAAGGCCTAACGATTACGAGAGACACGGTGATTGATGCAATTATTGCA AAGCGCATCCATATTATTGCGGTCAACTTTGGAAGCGATGTAACGGCAGA TAACGATGATTCAAAGGGGTTCAATAGTGCCGCAGAGAGCTTTGGGTGTG GAGTTTCAGAGATGTCGGACTCGAGGCAAGCAAATGAAATTGCATTTAAA ACGGCAGGGGAAACAGTGTCAAAGACAGACCAGAGTGATCTGGTTTCTAG CATCTATTTGTACATGTCAAGTTCTCCCAATGGCATACGCCCTACAAAAA GTTGTGAACCATATCTCCAAGGACCTGAGTTAAGTTCTTCTTCGTGGTCC TTTGGTAATATTGAGACACTACGTTTTGAACAATTTACTGTGACTTCACA AATGTGTGACCTACCCACCACCTCGCTGGAGTGCAAGTATGAATATACAA TTGATTACAGCCCAACAGCTAGATCGAAGGTTGTGGCTGTGATTAACGTG AAAGTTGACAATGTACAAGGATGTTAG back to top
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