Ggra4708.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4708.t1
Unique NameGgra4708.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length552
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:18860..20515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4708Ggra4708Gracilaria gracilis GNS1m malegenetig00000065_pilon 18860..20515 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4708.t1.stop1Ggra4708.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000065_pilon 18860..18862 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4708.t1.CDS1Ggra4708.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000065_pilon 18860..20515 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4708.t1.exon1Ggra4708.t1.exon1Gracilaria gracilis GNS1m maleexontig00000065_pilon 18860..20515 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4708.t1.start1Ggra4708.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000065_pilon 20513..20515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4708.t1Ggra4708.t1Gracilaria gracilis GNS1m malepolypeptidetig00000065_pilon 18860..20515 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4708.t1 ID=Ggra4708.t1|Name=Ggra4708.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp
MAVEENMRIAIIGGNFLGCATAFYTRKACPNADIRIFEQKPRLGGNKFAT
VRNVVVGTAAGTDVASAPLLRTLLEDAAIELESKRARSEWALFDWKQDSY
NLSQSRSSLIRKTLASRFVPVFLQLFALCSTLYFAAAFLSRSPLFVRYAR
RTGAYLHYPSILLFANAAVLGFGLIPATRVLRFWDFLFHVFWVRILASIT
YGAESLSVLSTIMSQIDQHLQTIQKHDSATSCVTLGHLLSACGMAKFVKR
SAARHFSQFRLHPSILDETIYPSFSQLYADSNVTHHMNALAALLGMLATA
PIPSNLRATPCFLSPQDARHVCPRLATSSSAQCELNTEVAVVEKTSTGWK
LFGQGESGERRTLGTYDAVILAAVVDPTRFSVTGLQEDLSKSLALSDKFI
EPDQARTEVNVFRYTALVTGTLNADYVRRSSENDLPTVVTVLNSVNCAEI
RRVERGTWRVVTGEEPTRTSNVIRTLFTSVENITVYENPKRRYKCTTLSD
INGAQAPSFILGTRFLNAACVDRVANDINLDCLSAINTASFFNEKVATWK
E*
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spliced messenger RNA

>Ggra4708.t1 ID=Ggra4708.t1|Name=Ggra4708.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1656bp|location=Sequence derived from alignment at tig00000065_pilon:18860..20515- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGTGGAGGAGAACATGCGCATAGCCATTATTGGCGGCAACTTTCT
CGGCTGCGCCACCGCCTTCTACACTCGCAAAGCGTGTCCCAACGCCGACA
TCCGCATCTTTGAGCAAAAGCCTCGTCTGGGTGGCAACAAGTTTGCCACC
GTGCGAAACGTCGTCGTCGGTACAGCCGCCGGTACGGACGTCGCCTCCGC
CCCGTTGCTGCGCACGCTGCTCGAAGATGCTGCCATTGAGCTTGAGTCGA
AGCGCGCTCGTTCCGAGTGGGCTCTCTTCGATTGGAAACAGGACTCTTAC
AACTTGTCTCAGTCGCGCTCCTCGTTGATTCGCAAAACCCTCGCGTCACG
CTTTGTACCCGTTTTTCTGCAGCTGTTCGCGTTATGCTCCACTCTCTACT
TTGCAGCAGCTTTTCTCTCACGTTCACCTCTGTTTGTGAGATATGCACGC
CGCACTGGAGCCTACCTCCATTACCCTTCCATTCTCTTGTTTGCGAATGC
AGCCGTGCTGGGGTTTGGCCTCATTCCCGCCACACGCGTACTCCGTTTCT
GGGATTTCTTGTTCCATGTGTTTTGGGTCAGAATTCTGGCTTCCATCACA
TACGGCGCTGAATCACTATCGGTGTTATCCACAATCATGTCTCAGATTGA
CCAGCATCTACAAACTATCCAAAAGCATGATTCAGCCACTAGTTGCGTAA
CTCTTGGCCATCTGCTTTCGGCGTGTGGCATGGCAAAGTTCGTCAAAAGG
TCTGCAGCTCGCCATTTCTCCCAGTTTAGACTACATCCTTCCATTCTCGA
TGAAACAATTTATCCCTCTTTCAGTCAGCTATACGCTGACTCAAATGTAA
CCCATCACATGAATGCTTTGGCTGCGCTGCTTGGTATGCTAGCCACGGCC
CCTATACCTAGTAATTTACGAGCAACACCGTGTTTCCTCTCACCTCAAGA
CGCACGGCATGTTTGTCCGCGACTAGCAACTTCATCTTCTGCTCAATGTG
AGTTAAACACTGAGGTGGCTGTGGTGGAAAAGACTTCTACAGGCTGGAAA
CTGTTTGGTCAGGGGGAGAGTGGAGAGAGAAGAACCCTTGGCACATATGA
CGCTGTTATTCTCGCTGCAGTGGTTGACCCAACTCGGTTTTCTGTCACTG
GGCTGCAGGAAGACTTGTCCAAATCACTTGCATTATCAGACAAGTTCATC
GAACCAGACCAGGCCAGAACAGAAGTCAATGTCTTCAGGTACACTGCACT
CGTTACAGGCACGCTGAATGCTGACTATGTAAGGAGGTCATCAGAGAATG
ACCTACCAACTGTTGTAACTGTCTTGAATTCAGTCAATTGCGCAGAAATT
CGACGGGTGGAGCGGGGAACGTGGCGTGTCGTAACTGGAGAGGAGCCCAC
TAGGACTTCAAATGTCATCCGTACTCTTTTTACATCCGTAGAGAACATCA
CTGTCTATGAGAACCCGAAAAGGCGGTACAAGTGCACAACACTGAGCGAT
ATAAATGGAGCCCAGGCGCCTTCCTTTATCCTTGGAACTCGATTCTTGAA
TGCTGCATGTGTGGATAGGGTGGCAAACGACATTAATCTTGATTGCCTTT
CGGCGATTAACACTGCTTCATTCTTCAACGAGAAGGTGGCTACTTGGAAG
GAGTGA
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protein sequence of Ggra4708.t1

>Ggra4708.t1 ID=Ggra4708.t1|Name=Ggra4708.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=552bp
MAVEENMRIAIIGGNFLGCATAFYTRKACPNADIRIFEQKPRLGGNKFAT
VRNVVVGTAAGTDVASAPLLRTLLEDAAIELESKRARSEWALFDWKQDSY
NLSQSRSSLIRKTLASRFVPVFLQLFALCSTLYFAAAFLSRSPLFVRYAR
RTGAYLHYPSILLFANAAVLGFGLIPATRVLRFWDFLFHVFWVRILASIT
YGAESLSVLSTIMSQIDQHLQTIQKHDSATSCVTLGHLLSACGMAKFVKR
SAARHFSQFRLHPSILDETIYPSFSQLYADSNVTHHMNALAALLGMLATA
PIPSNLRATPCFLSPQDARHVCPRLATSSSAQCELNTEVAVVEKTSTGWK
LFGQGESGERRTLGTYDAVILAAVVDPTRFSVTGLQEDLSKSLALSDKFI
EPDQARTEVNVFRYTALVTGTLNADYVRRSSENDLPTVVTVLNSVNCAEI
RRVERGTWRVVTGEEPTRTSNVIRTLFTSVENITVYENPKRRYKCTTLSD
INGAQAPSFILGTRFLNAACVDRVANDINLDCLSAINTASFFNEKVATWK
E*
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mRNA from alignment at tig00000065_pilon:18860..20515-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4708.t1 ID=Ggra4708.t1|Name=Ggra4708.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1656bp|location=Sequence derived from alignment at tig00000065_pilon:18860..20515- (Gracilaria gracilis GNS1m male)
ATGGCCGTGGAGGAGAACATGCGCATAGCCATTATTGGCGGCAACTTTCT
CGGCTGCGCCACCGCCTTCTACACTCGCAAAGCGTGTCCCAACGCCGACA
TCCGCATCTTTGAGCAAAAGCCTCGTCTGGGTGGCAACAAGTTTGCCACC
GTGCGAAACGTCGTCGTCGGTACAGCCGCCGGTACGGACGTCGCCTCCGC
CCCGTTGCTGCGCACGCTGCTCGAAGATGCTGCCATTGAGCTTGAGTCGA
AGCGCGCTCGTTCCGAGTGGGCTCTCTTCGATTGGAAACAGGACTCTTAC
AACTTGTCTCAGTCGCGCTCCTCGTTGATTCGCAAAACCCTCGCGTCACG
CTTTGTACCCGTTTTTCTGCAGCTGTTCGCGTTATGCTCCACTCTCTACT
TTGCAGCAGCTTTTCTCTCACGTTCACCTCTGTTTGTGAGATATGCACGC
CGCACTGGAGCCTACCTCCATTACCCTTCCATTCTCTTGTTTGCGAATGC
AGCCGTGCTGGGGTTTGGCCTCATTCCCGCCACACGCGTACTCCGTTTCT
GGGATTTCTTGTTCCATGTGTTTTGGGTCAGAATTCTGGCTTCCATCACA
TACGGCGCTGAATCACTATCGGTGTTATCCACAATCATGTCTCAGATTGA
CCAGCATCTACAAACTATCCAAAAGCATGATTCAGCCACTAGTTGCGTAA
CTCTTGGCCATCTGCTTTCGGCGTGTGGCATGGCAAAGTTCGTCAAAAGG
TCTGCAGCTCGCCATTTCTCCCAGTTTAGACTACATCCTTCCATTCTCGA
TGAAACAATTTATCCCTCTTTCAGTCAGCTATACGCTGACTCAAATGTAA
CCCATCACATGAATGCTTTGGCTGCGCTGCTTGGTATGCTAGCCACGGCC
CCTATACCTAGTAATTTACGAGCAACACCGTGTTTCCTCTCACCTCAAGA
CGCACGGCATGTTTGTCCGCGACTAGCAACTTCATCTTCTGCTCAATGTG
AGTTAAACACTGAGGTGGCTGTGGTGGAAAAGACTTCTACAGGCTGGAAA
CTGTTTGGTCAGGGGGAGAGTGGAGAGAGAAGAACCCTTGGCACATATGA
CGCTGTTATTCTCGCTGCAGTGGTTGACCCAACTCGGTTTTCTGTCACTG
GGCTGCAGGAAGACTTGTCCAAATCACTTGCATTATCAGACAAGTTCATC
GAACCAGACCAGGCCAGAACAGAAGTCAATGTCTTCAGGTACACTGCACT
CGTTACAGGCACGCTGAATGCTGACTATGTAAGGAGGTCATCAGAGAATG
ACCTACCAACTGTTGTAACTGTCTTGAATTCAGTCAATTGCGCAGAAATT
CGACGGGTGGAGCGGGGAACGTGGCGTGTCGTAACTGGAGAGGAGCCCAC
TAGGACTTCAAATGTCATCCGTACTCTTTTTACATCCGTAGAGAACATCA
CTGTCTATGAGAACCCGAAAAGGCGGTACAAGTGCACAACACTGAGCGAT
ATAAATGGAGCCCAGGCGCCTTCCTTTATCCTTGGAACTCGATTCTTGAA
TGCTGCATGTGTGGATAGGGTGGCAAACGACATTAATCTTGATTGCCTTT
CGGCGATTAACACTGCTTCATTCTTCAACGAGAAGGTGGCTACTTGGAAG
GAGTGA
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Coding sequence (CDS) from alignment at tig00000065_pilon:18860..20515-

>Ggra4708.t1 ID=Ggra4708.t1|Name=Ggra4708.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1656bp|location=Sequence derived from alignment at tig00000065_pilon:18860..20515- (Gracilaria gracilis GNS1m male)
ATGGCCGTGGAGGAGAACATGCGCATAGCCATTATTGGCGGCAACTTTCT
CGGCTGCGCCACCGCCTTCTACACTCGCAAAGCGTGTCCCAACGCCGACA
TCCGCATCTTTGAGCAAAAGCCTCGTCTGGGTGGCAACAAGTTTGCCACC
GTGCGAAACGTCGTCGTCGGTACAGCCGCCGGTACGGACGTCGCCTCCGC
CCCGTTGCTGCGCACGCTGCTCGAAGATGCTGCCATTGAGCTTGAGTCGA
AGCGCGCTCGTTCCGAGTGGGCTCTCTTCGATTGGAAACAGGACTCTTAC
AACTTGTCTCAGTCGCGCTCCTCGTTGATTCGCAAAACCCTCGCGTCACG
CTTTGTACCCGTTTTTCTGCAGCTGTTCGCGTTATGCTCCACTCTCTACT
TTGCAGCAGCTTTTCTCTCACGTTCACCTCTGTTTGTGAGATATGCACGC
CGCACTGGAGCCTACCTCCATTACCCTTCCATTCTCTTGTTTGCGAATGC
AGCCGTGCTGGGGTTTGGCCTCATTCCCGCCACACGCGTACTCCGTTTCT
GGGATTTCTTGTTCCATGTGTTTTGGGTCAGAATTCTGGCTTCCATCACA
TACGGCGCTGAATCACTATCGGTGTTATCCACAATCATGTCTCAGATTGA
CCAGCATCTACAAACTATCCAAAAGCATGATTCAGCCACTAGTTGCGTAA
CTCTTGGCCATCTGCTTTCGGCGTGTGGCATGGCAAAGTTCGTCAAAAGG
TCTGCAGCTCGCCATTTCTCCCAGTTTAGACTACATCCTTCCATTCTCGA
TGAAACAATTTATCCCTCTTTCAGTCAGCTATACGCTGACTCAAATGTAA
CCCATCACATGAATGCTTTGGCTGCGCTGCTTGGTATGCTAGCCACGGCC
CCTATACCTAGTAATTTACGAGCAACACCGTGTTTCCTCTCACCTCAAGA
CGCACGGCATGTTTGTCCGCGACTAGCAACTTCATCTTCTGCTCAATGTG
AGTTAAACACTGAGGTGGCTGTGGTGGAAAAGACTTCTACAGGCTGGAAA
CTGTTTGGTCAGGGGGAGAGTGGAGAGAGAAGAACCCTTGGCACATATGA
CGCTGTTATTCTCGCTGCAGTGGTTGACCCAACTCGGTTTTCTGTCACTG
GGCTGCAGGAAGACTTGTCCAAATCACTTGCATTATCAGACAAGTTCATC
GAACCAGACCAGGCCAGAACAGAAGTCAATGTCTTCAGGTACACTGCACT
CGTTACAGGCACGCTGAATGCTGACTATGTAAGGAGGTCATCAGAGAATG
ACCTACCAACTGTTGTAACTGTCTTGAATTCAGTCAATTGCGCAGAAATT
CGACGGGTGGAGCGGGGAACGTGGCGTGTCGTAACTGGAGAGGAGCCCAC
TAGGACTTCAAATGTCATCCGTACTCTTTTTACATCCGTAGAGAACATCA
CTGTCTATGAGAACCCGAAAAGGCGGTACAAGTGCACAACACTGAGCGAT
ATAAATGGAGCCCAGGCGCCTTCCTTTATCCTTGGAACTCGATTCTTGAA
TGCTGCATGTGTGGATAGGGTGGCAAACGACATTAATCTTGATTGCCTTT
CGGCGATTAACACTGCTTCATTCTTCAACGAGAAGGTGGCTACTTGGAAG
GAGTGA
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