Ggra3415.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3415.t1
Unique NameGgra3415.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:266273..266866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3415Ggra3415Gracilaria gracilis GNS1m malegenetig00000905_pilon 266273..266866 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3415.t1.stop1Ggra3415.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000905_pilon 266273..266275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3415.t1.CDS1Ggra3415.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000905_pilon 266273..266866 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3415.t1.exon1Ggra3415.t1.exon1Gracilaria gracilis GNS1m maleexontig00000905_pilon 266273..266866 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3415.t1.start1Ggra3415.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000905_pilon 266864..266866 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3415.t1Ggra3415.t1Gracilaria gracilis GNS1m malepolypeptidetig00000905_pilon 266273..266866 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3415.t1 ID=Ggra3415.t1|Name=Ggra3415.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=198bp
MVGQQQQPLTTAESLKRLNAAEQKVLNFLTQATEAVRALSQTEAPEVTSA
SVHAQQFIVNVHEVQAILRAQIESLTSDVPQENITMLRLVEADLALQRTA
HVHRALAHILKLFGEPVSGVPTTAPSPAYMPSPVANTPVGLIGGMAPTPP
AAGAPITIAVPSPDNKAASAQLSMQIGLNGGASEAAPDPQNADTMEI*
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spliced messenger RNA

>Ggra3415.t1 ID=Ggra3415.t1|Name=Ggra3415.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000905_pilon:266273..266866- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCGGTCAACAACAACAGCCGCTGACAACAGCGGAATCGCTCAAGAG
ATTAAACGCCGCGGAACAGAAGGTGTTAAATTTTCTAACTCAAGCAACCG
AAGCGGTCCGAGCACTTTCGCAAACCGAAGCTCCCGAGGTCACCTCCGCC
AGCGTGCACGCTCAACAGTTCATCGTAAACGTACACGAAGTGCAGGCGAT
TCTTCGTGCTCAGATTGAATCGCTCACCAGCGATGTACCACAGGAAAACA
TAACCATGTTGCGACTAGTTGAGGCCGACCTTGCTTTGCAAAGAACCGCC
CATGTTCATCGTGCGCTAGCCCATATCCTGAAATTGTTTGGAGAACCAGT
ATCTGGAGTGCCTACTACAGCGCCCAGTCCCGCATACATGCCGAGCCCCG
TTGCAAACACCCCGGTTGGACTTATAGGAGGTATGGCCCCTACCCCGCCT
GCTGCTGGTGCTCCTATCACTATTGCCGTACCAAGTCCGGATAACAAGGC
TGCTAGTGCTCAACTTTCGATGCAAATTGGGCTAAATGGCGGCGCGTCGG
AGGCGGCGCCCGACCCGCAGAATGCCGATACGATGGAGATATAA
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protein sequence of Ggra3415.t1

>Ggra3415.t1 ID=Ggra3415.t1|Name=Ggra3415.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MVGQQQQPLTTAESLKRLNAAEQKVLNFLTQATEAVRALSQTEAPEVTSA
SVHAQQFIVNVHEVQAILRAQIESLTSDVPQENITMLRLVEADLALQRTA
HVHRALAHILKLFGEPVSGVPTTAPSPAYMPSPVANTPVGLIGGMAPTPP
AAGAPITIAVPSPDNKAASAQLSMQIGLNGGASEAAPDPQNADTMEI*
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mRNA from alignment at tig00000905_pilon:266273..266866-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3415.t1 ID=Ggra3415.t1|Name=Ggra3415.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000905_pilon:266273..266866- (Gracilaria gracilis GNS1m male)
ATGGTCGGTCAACAACAACAGCCGCTGACAACAGCGGAATCGCTCAAGAG
ATTAAACGCCGCGGAACAGAAGGTGTTAAATTTTCTAACTCAAGCAACCG
AAGCGGTCCGAGCACTTTCGCAAACCGAAGCTCCCGAGGTCACCTCCGCC
AGCGTGCACGCTCAACAGTTCATCGTAAACGTACACGAAGTGCAGGCGAT
TCTTCGTGCTCAGATTGAATCGCTCACCAGCGATGTACCACAGGAAAACA
TAACCATGTTGCGACTAGTTGAGGCCGACCTTGCTTTGCAAAGAACCGCC
CATGTTCATCGTGCGCTAGCCCATATCCTGAAATTGTTTGGAGAACCAGT
ATCTGGAGTGCCTACTACAGCGCCCAGTCCCGCATACATGCCGAGCCCCG
TTGCAAACACCCCGGTTGGACTTATAGGAGGTATGGCCCCTACCCCGCCT
GCTGCTGGTGCTCCTATCACTATTGCCGTACCAAGTCCGGATAACAAGGC
TGCTAGTGCTCAACTTTCGATGCAAATTGGGCTAAATGGCGGCGCGTCGG
AGGCGGCGCCCGACCCGCAGAATGCCGATACGATGGAGATATAA
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Coding sequence (CDS) from alignment at tig00000905_pilon:266273..266866-

>Ggra3415.t1 ID=Ggra3415.t1|Name=Ggra3415.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=594bp|location=Sequence derived from alignment at tig00000905_pilon:266273..266866- (Gracilaria gracilis GNS1m male)
ATGGTCGGTCAACAACAACAGCCGCTGACAACAGCGGAATCGCTCAAGAG
ATTAAACGCCGCGGAACAGAAGGTGTTAAATTTTCTAACTCAAGCAACCG
AAGCGGTCCGAGCACTTTCGCAAACCGAAGCTCCCGAGGTCACCTCCGCC
AGCGTGCACGCTCAACAGTTCATCGTAAACGTACACGAAGTGCAGGCGAT
TCTTCGTGCTCAGATTGAATCGCTCACCAGCGATGTACCACAGGAAAACA
TAACCATGTTGCGACTAGTTGAGGCCGACCTTGCTTTGCAAAGAACCGCC
CATGTTCATCGTGCGCTAGCCCATATCCTGAAATTGTTTGGAGAACCAGT
ATCTGGAGTGCCTACTACAGCGCCCAGTCCCGCATACATGCCGAGCCCCG
TTGCAAACACCCCGGTTGGACTTATAGGAGGTATGGCCCCTACCCCGCCT
GCTGCTGGTGCTCCTATCACTATTGCCGTACCAAGTCCGGATAACAAGGC
TGCTAGTGCTCAACTTTCGATGCAAATTGGGCTAAATGGCGGCGCGTCGG
AGGCGGCGCCCGACCCGCAGAATGCCGATACGATGGAGATATAA
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