Ggra3352.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3352.t1
Unique NameGgra3352.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length305
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:83865..84779 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3352Ggra3352Gracilaria gracilis GNS1m malegenetig00000189_pilon 83865..84779 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3352.t1.stop1Ggra3352.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000189_pilon 83865..83867 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3352.t1.CDS1Ggra3352.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000189_pilon 83865..84779 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3352.t1.exon1Ggra3352.t1.exon1Gracilaria gracilis GNS1m maleexontig00000189_pilon 83865..84779 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3352.t1.start1Ggra3352.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000189_pilon 84777..84779 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3352.t1Ggra3352.t1Gracilaria gracilis GNS1m malepolypeptidetig00000189_pilon 83865..84779 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3352.t1 ID=Ggra3352.t1|Name=Ggra3352.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=305bp
MLIVVCMIVRFMKCCRNTELDGGVIWTRNEIERCVETKCLQRAPLNELIT
EEEGREAQSVMASLIGKRHIANAPPAVLQGARHATCAVVGGAPLDEHIDR
SEQTGLVEAADVVIRLNARYPRLMRAEGQEETLGRTTHVLVVQRGALRYL
KSAMYGWGQRNVSLGGERRKAFEWLRREAPAMVYRHECPGRFGACVQGWQ
SLQQSAVASVLQVHLVHPRVEARAYQLVERHKRGGGRTASVPTTGMIGVA
MALRSCGAVQLFAMNGSTAARTRHGAIVWRGHDVAAERSYVRAAENSGAL
RIFS*
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spliced messenger RNA

>Ggra3352.t1 ID=Ggra3352.t1|Name=Ggra3352.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=915bp|location=Sequence derived from alignment at tig00000189_pilon:83865..84779- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGATTGTGGTGTGCATGATAGTACGCTTTATGAAGTGCTGTCGCAA
TACAGAGTTGGACGGTGGGGTTATATGGACTCGCAATGAGATTGAAAGAT
GCGTTGAAACAAAATGCCTACAACGCGCGCCGCTGAACGAACTGATCACA
GAAGAAGAAGGCAGGGAAGCGCAGTCTGTAATGGCGTCGTTGATTGGTAA
GAGACACATAGCCAATGCACCGCCCGCCGTGTTGCAGGGTGCAAGGCACG
CAACGTGCGCGGTGGTAGGGGGAGCGCCGCTCGACGAGCATATTGACAGG
AGCGAGCAGACTGGGTTGGTAGAAGCAGCAGACGTGGTGATACGGCTTAA
CGCGCGGTACCCGCGTTTGATGAGGGCAGAGGGGCAGGAGGAGACGCTAG
GGCGGACGACGCACGTGCTGGTGGTGCAGAGAGGGGCGTTACGCTACCTG
AAGAGCGCGATGTACGGATGGGGTCAGCGCAACGTGAGTCTGGGAGGCGA
ACGACGGAAGGCGTTCGAATGGCTGCGGCGCGAGGCACCCGCCATGGTGT
ACCGCCACGAATGCCCCGGTCGCTTCGGCGCGTGCGTGCAGGGGTGGCAA
TCGCTGCAACAGTCGGCGGTGGCGTCGGTGCTGCAGGTGCACTTGGTGCA
CCCGCGCGTGGAAGCGCGCGCCTACCAGCTGGTGGAGAGGCACAAAAGGG
GCGGCGGCCGCACAGCTTCGGTGCCTACGACGGGGATGATTGGCGTGGCG
ATGGCGCTGCGCAGCTGCGGCGCGGTGCAGCTGTTCGCCATGAACGGGTC
AACGGCGGCGCGCACTCGCCATGGCGCCATCGTGTGGCGCGGACATGACG
TGGCGGCAGAGCGCTCGTATGTGCGCGCTGCCGAGAACAGCGGCGCACTG
CGCATCTTCTCGTGA
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protein sequence of Ggra3352.t1

>Ggra3352.t1 ID=Ggra3352.t1|Name=Ggra3352.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=305bp
MLIVVCMIVRFMKCCRNTELDGGVIWTRNEIERCVETKCLQRAPLNELIT
EEEGREAQSVMASLIGKRHIANAPPAVLQGARHATCAVVGGAPLDEHIDR
SEQTGLVEAADVVIRLNARYPRLMRAEGQEETLGRTTHVLVVQRGALRYL
KSAMYGWGQRNVSLGGERRKAFEWLRREAPAMVYRHECPGRFGACVQGWQ
SLQQSAVASVLQVHLVHPRVEARAYQLVERHKRGGGRTASVPTTGMIGVA
MALRSCGAVQLFAMNGSTAARTRHGAIVWRGHDVAAERSYVRAAENSGAL
RIFS*
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mRNA from alignment at tig00000189_pilon:83865..84779-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3352.t1 ID=Ggra3352.t1|Name=Ggra3352.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=915bp|location=Sequence derived from alignment at tig00000189_pilon:83865..84779- (Gracilaria gracilis GNS1m male)
ATGCTGATTGTGGTGTGCATGATAGTACGCTTTATGAAGTGCTGTCGCAA
TACAGAGTTGGACGGTGGGGTTATATGGACTCGCAATGAGATTGAAAGAT
GCGTTGAAACAAAATGCCTACAACGCGCGCCGCTGAACGAACTGATCACA
GAAGAAGAAGGCAGGGAAGCGCAGTCTGTAATGGCGTCGTTGATTGGTAA
GAGACACATAGCCAATGCACCGCCCGCCGTGTTGCAGGGTGCAAGGCACG
CAACGTGCGCGGTGGTAGGGGGAGCGCCGCTCGACGAGCATATTGACAGG
AGCGAGCAGACTGGGTTGGTAGAAGCAGCAGACGTGGTGATACGGCTTAA
CGCGCGGTACCCGCGTTTGATGAGGGCAGAGGGGCAGGAGGAGACGCTAG
GGCGGACGACGCACGTGCTGGTGGTGCAGAGAGGGGCGTTACGCTACCTG
AAGAGCGCGATGTACGGATGGGGTCAGCGCAACGTGAGTCTGGGAGGCGA
ACGACGGAAGGCGTTCGAATGGCTGCGGCGCGAGGCACCCGCCATGGTGT
ACCGCCACGAATGCCCCGGTCGCTTCGGCGCGTGCGTGCAGGGGTGGCAA
TCGCTGCAACAGTCGGCGGTGGCGTCGGTGCTGCAGGTGCACTTGGTGCA
CCCGCGCGTGGAAGCGCGCGCCTACCAGCTGGTGGAGAGGCACAAAAGGG
GCGGCGGCCGCACAGCTTCGGTGCCTACGACGGGGATGATTGGCGTGGCG
ATGGCGCTGCGCAGCTGCGGCGCGGTGCAGCTGTTCGCCATGAACGGGTC
AACGGCGGCGCGCACTCGCCATGGCGCCATCGTGTGGCGCGGACATGACG
TGGCGGCAGAGCGCTCGTATGTGCGCGCTGCCGAGAACAGCGGCGCACTG
CGCATCTTCTCGTGA
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Coding sequence (CDS) from alignment at tig00000189_pilon:83865..84779-

>Ggra3352.t1 ID=Ggra3352.t1|Name=Ggra3352.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=915bp|location=Sequence derived from alignment at tig00000189_pilon:83865..84779- (Gracilaria gracilis GNS1m male)
ATGCTGATTGTGGTGTGCATGATAGTACGCTTTATGAAGTGCTGTCGCAA
TACAGAGTTGGACGGTGGGGTTATATGGACTCGCAATGAGATTGAAAGAT
GCGTTGAAACAAAATGCCTACAACGCGCGCCGCTGAACGAACTGATCACA
GAAGAAGAAGGCAGGGAAGCGCAGTCTGTAATGGCGTCGTTGATTGGTAA
GAGACACATAGCCAATGCACCGCCCGCCGTGTTGCAGGGTGCAAGGCACG
CAACGTGCGCGGTGGTAGGGGGAGCGCCGCTCGACGAGCATATTGACAGG
AGCGAGCAGACTGGGTTGGTAGAAGCAGCAGACGTGGTGATACGGCTTAA
CGCGCGGTACCCGCGTTTGATGAGGGCAGAGGGGCAGGAGGAGACGCTAG
GGCGGACGACGCACGTGCTGGTGGTGCAGAGAGGGGCGTTACGCTACCTG
AAGAGCGCGATGTACGGATGGGGTCAGCGCAACGTGAGTCTGGGAGGCGA
ACGACGGAAGGCGTTCGAATGGCTGCGGCGCGAGGCACCCGCCATGGTGT
ACCGCCACGAATGCCCCGGTCGCTTCGGCGCGTGCGTGCAGGGGTGGCAA
TCGCTGCAACAGTCGGCGGTGGCGTCGGTGCTGCAGGTGCACTTGGTGCA
CCCGCGCGTGGAAGCGCGCGCCTACCAGCTGGTGGAGAGGCACAAAAGGG
GCGGCGGCCGCACAGCTTCGGTGCCTACGACGGGGATGATTGGCGTGGCG
ATGGCGCTGCGCAGCTGCGGCGCGGTGCAGCTGTTCGCCATGAACGGGTC
AACGGCGGCGCGCACTCGCCATGGCGCCATCGTGTGGCGCGGACATGACG
TGGCGGCAGAGCGCTCGTATGTGCGCGCTGCCGAGAACAGCGGCGCACTG
CGCATCTTCTCGTGA
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