Ggra327.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra327.t1
Unique NameGgra327.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000209_piloncontigtig00000209_pilon:86462..87259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra327Ggra327Gracilaria gracilis GNS1m malegenetig00000209_pilon 86462..87259 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra327.t1.start1Ggra327.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000209_pilon 86462..86464 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra327.t1.CDS1Ggra327.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000209_pilon 86462..87259 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra327.t1.exon1Ggra327.t1.exon1Gracilaria gracilis GNS1m maleexontig00000209_pilon 86462..87259 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra327.t1.stop1Ggra327.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000209_pilon 87257..87259 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra327.t1Ggra327.t1Gracilaria gracilis GNS1m malepolypeptidetig00000209_pilon 86462..87259 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra327.t1 ID=Ggra327.t1|Name=Ggra327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=266bp
MPESRSWSSKPALESTTITTINLVSDVESGTEQGPDVSEPVSATESEAPD
CRDVLDLMSEGDFEMRTVVDPLEVIGDLHDDDGNLRSRTEAAWRLGIKVL
EKTNPEIFESKKARMKIRSKAKQGHIVYAGIGVDISNCDGLRSVMDKFCS
PEFNSRNPSEKGKKELKTTVSQFLRWCVVSSACHKNDVWRRSVLFESVSN
KYLVETILSHFLERCATRTFRAKAGHFFVMCVTARPTLRGIRRDNLDNVV
AFLNGIVPKKRAVQL*
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spliced messenger RNA

>Ggra327.t1 ID=Ggra327.t1|Name=Ggra327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000209_pilon:86462..87259+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGAATCGCGGAGTTGGAGCTCGAAGCCAGCTCTAGAATCTACTAC
AATCACAACAATCAACCTTGTATCTGATGTAGAGTCCGGAACGGAGCAAG
GCCCAGATGTGAGCGAACCTGTATCTGCGACAGAATCAGAGGCGCCAGAT
TGTCGTGATGTACTCGACCTTATGTCTGAGGGAGATTTTGAAATGCGTAC
CGTGGTTGATCCATTGGAAGTCATAGGAGATCTTCACGATGATGATGGAA
ATTTGAGAAGTCGAACAGAAGCTGCCTGGAGGTTGGGGATCAAGGTGCTT
GAGAAAACGAATCCGGAAATCTTCGAGAGCAAGAAAGCGCGGATGAAAAT
TCGCTCCAAAGCGAAGCAGGGACACATCGTTTATGCTGGAATTGGGGTGG
ATATATCCAATTGTGATGGGCTGAGAAGTGTGATGGACAAGTTTTGCTCT
CCAGAATTCAATTCCCGAAACCCGAGTGAGAAGGGCAAGAAAGAGTTGAA
GACAACCGTGTCCCAGTTCTTACGTTGGTGCGTTGTCAGCTCTGCTTGCC
ATAAGAACGACGTCTGGAGGAGAAGCGTCTTGTTTGAAAGCGTGTCCAAC
AAATATCTTGTGGAGACGATTTTATCGCACTTTCTCGAGCGCTGTGCCAC
CCGGACGTTCAGAGCGAAGGCAGGACACTTTTTTGTAATGTGTGTCACAG
CTCGGCCGACTCTCAGAGGTATTCGGAGGGATAACCTAGACAATGTCGTT
GCTTTTCTCAATGGCATTGTGCCGAAGAAGAGAGCTGTGCAGCTATAG
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protein sequence of Ggra327.t1

>Ggra327.t1 ID=Ggra327.t1|Name=Ggra327.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MPESRSWSSKPALESTTITTINLVSDVESGTEQGPDVSEPVSATESEAPD
CRDVLDLMSEGDFEMRTVVDPLEVIGDLHDDDGNLRSRTEAAWRLGIKVL
EKTNPEIFESKKARMKIRSKAKQGHIVYAGIGVDISNCDGLRSVMDKFCS
PEFNSRNPSEKGKKELKTTVSQFLRWCVVSSACHKNDVWRRSVLFESVSN
KYLVETILSHFLERCATRTFRAKAGHFFVMCVTARPTLRGIRRDNLDNVV
AFLNGIVPKKRAVQL*
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mRNA from alignment at tig00000209_pilon:86462..87259+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra327.t1 ID=Ggra327.t1|Name=Ggra327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000209_pilon:86462..87259+ (Gracilaria gracilis GNS1m male)
ATGCCCGAATCGCGGAGTTGGAGCTCGAAGCCAGCTCTAGAATCTACTAC
AATCACAACAATCAACCTTGTATCTGATGTAGAGTCCGGAACGGAGCAAG
GCCCAGATGTGAGCGAACCTGTATCTGCGACAGAATCAGAGGCGCCAGAT
TGTCGTGATGTACTCGACCTTATGTCTGAGGGAGATTTTGAAATGCGTAC
CGTGGTTGATCCATTGGAAGTCATAGGAGATCTTCACGATGATGATGGAA
ATTTGAGAAGTCGAACAGAAGCTGCCTGGAGGTTGGGGATCAAGGTGCTT
GAGAAAACGAATCCGGAAATCTTCGAGAGCAAGAAAGCGCGGATGAAAAT
TCGCTCCAAAGCGAAGCAGGGACACATCGTTTATGCTGGAATTGGGGTGG
ATATATCCAATTGTGATGGGCTGAGAAGTGTGATGGACAAGTTTTGCTCT
CCAGAATTCAATTCCCGAAACCCGAGTGAGAAGGGCAAGAAAGAGTTGAA
GACAACCGTGTCCCAGTTCTTACGTTGGTGCGTTGTCAGCTCTGCTTGCC
ATAAGAACGACGTCTGGAGGAGAAGCGTCTTGTTTGAAAGCGTGTCCAAC
AAATATCTTGTGGAGACGATTTTATCGCACTTTCTCGAGCGCTGTGCCAC
CCGGACGTTCAGAGCGAAGGCAGGACACTTTTTTGTAATGTGTGTCACAG
CTCGGCCGACTCTCAGAGGTATTCGGAGGGATAACCTAGACAATGTCGTT
GCTTTTCTCAATGGCATTGTGCCGAAGAAGAGAGCTGTGCAGCTATAG
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Coding sequence (CDS) from alignment at tig00000209_pilon:86462..87259+

>Ggra327.t1 ID=Ggra327.t1|Name=Ggra327.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=798bp|location=Sequence derived from alignment at tig00000209_pilon:86462..87259+ (Gracilaria gracilis GNS1m male)
ATGCCCGAATCGCGGAGTTGGAGCTCGAAGCCAGCTCTAGAATCTACTAC
AATCACAACAATCAACCTTGTATCTGATGTAGAGTCCGGAACGGAGCAAG
GCCCAGATGTGAGCGAACCTGTATCTGCGACAGAATCAGAGGCGCCAGAT
TGTCGTGATGTACTCGACCTTATGTCTGAGGGAGATTTTGAAATGCGTAC
CGTGGTTGATCCATTGGAAGTCATAGGAGATCTTCACGATGATGATGGAA
ATTTGAGAAGTCGAACAGAAGCTGCCTGGAGGTTGGGGATCAAGGTGCTT
GAGAAAACGAATCCGGAAATCTTCGAGAGCAAGAAAGCGCGGATGAAAAT
TCGCTCCAAAGCGAAGCAGGGACACATCGTTTATGCTGGAATTGGGGTGG
ATATATCCAATTGTGATGGGCTGAGAAGTGTGATGGACAAGTTTTGCTCT
CCAGAATTCAATTCCCGAAACCCGAGTGAGAAGGGCAAGAAAGAGTTGAA
GACAACCGTGTCCCAGTTCTTACGTTGGTGCGTTGTCAGCTCTGCTTGCC
ATAAGAACGACGTCTGGAGGAGAAGCGTCTTGTTTGAAAGCGTGTCCAAC
AAATATCTTGTGGAGACGATTTTATCGCACTTTCTCGAGCGCTGTGCCAC
CCGGACGTTCAGAGCGAAGGCAGGACACTTTTTTGTAATGTGTGTCACAG
CTCGGCCGACTCTCAGAGGTATTCGGAGGGATAACCTAGACAATGTCGTT
GCTTTTCTCAATGGCATTGTGCCGAAGAAGAGAGCTGTGCAGCTATAG
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