Ggra3241.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3241.t1
Unique NameGgra3241.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:158538..159353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3241Ggra3241Gracilaria gracilis GNS1m malegenetig00000922_pilon 158538..159353 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3241.t1.start1Ggra3241.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000922_pilon 158538..158540 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3241.t1.CDS1Ggra3241.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000922_pilon 158538..159353 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3241.t1.exon1Ggra3241.t1.exon1Gracilaria gracilis GNS1m maleexontig00000922_pilon 158538..159353 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3241.t1.stop1Ggra3241.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000922_pilon 159351..159353 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3241.t1Ggra3241.t1Gracilaria gracilis GNS1m malepolypeptidetig00000922_pilon 158538..159353 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3241.t1 ID=Ggra3241.t1|Name=Ggra3241.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=272bp
MMNEFSDRFLLVISRMPISSVSLRRYLFEGKRKRALGFAANVNFEPCGLG
LICNARNEEDECKPLSLDSVHGVNIAPRPCDERETQNLNVKLQEQCSLKT
NSSRRQRGRRGSKRGSQGRTSAEQESLGHQVKHEGVLQQNTAMTHEEELI
HEEEDQKEEVKLGASNRGGQGGQAMGHGRGERVHARGRGRLARGGRQVGL
ANGSGRGGFVNGGSRGVLANESGRGGRFNRGGRGGRSNRGGRESHGNRGG
RGGHANRGGRGGRGRIGRRGG*
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spliced messenger RNA

>Ggra3241.t1 ID=Ggra3241.t1|Name=Ggra3241.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=816bp|location=Sequence derived from alignment at tig00000922_pilon:158538..159353+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGAACGAGTTCTCTGATCGCTTTTTGTTGGTGATTTCGAGGATGCC
GATCTCGTCAGTATCCCTCAGAAGGTATTTGTTTGAGGGAAAGAGGAAAC
GGGCTCTGGGTTTTGCTGCAAACGTTAACTTCGAGCCATGCGGGCTTGGG
TTGATCTGCAATGCACGGAATGAAGAGGATGAATGTAAACCTCTAAGTCT
GGACTCAGTGCATGGCGTGAATATAGCCCCCCGTCCGTGTGATGAACGTG
AAACCCAGAACCTCAACGTCAAGCTTCAAGAACAATGTTCCCTCAAAACA
AACAGTTCGAGACGTCAGCGAGGCCGCCGCGGAAGCAAAAGAGGAAGCCA
GGGAAGAACATCTGCGGAACAGGAAAGTCTTGGCCACCAAGTAAAGCACG
AGGGTGTATTGCAGCAAAATACGGCTATGACCCATGAGGAAGAGCTCATC
CATGAAGAAGAAGATCAGAAGGAAGAGGTGAAACTTGGTGCTTCTAATCG
AGGCGGCCAAGGTGGCCAGGCAATGGGACACGGCCGAGGTGAACGTGTCC
ACGCACGCGGCCGAGGTCGCCTTGCAAGAGGAGGCAGGCAAGTTGGTCTT
GCAAACGGAAGCGGCCGAGGTGGCTTCGTAAACGGAGGCAGCCGAGGTGT
TCTTGCAAACGAGAGCGGTCGAGGTGGCCGCTTTAATAGAGGCGGCCGAG
GTGGCCGCTCTAATAGAGGCGGCCGAGAAAGTCACGGAAACAGAGGCGGC
CGAGGTGGCCACGCAAACAGAGGCGGTCGAGGTGGGCGTGGAAGGATCGG
CCGCCGAGGTGGGTAG
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protein sequence of Ggra3241.t1

>Ggra3241.t1 ID=Ggra3241.t1|Name=Ggra3241.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MMNEFSDRFLLVISRMPISSVSLRRYLFEGKRKRALGFAANVNFEPCGLG
LICNARNEEDECKPLSLDSVHGVNIAPRPCDERETQNLNVKLQEQCSLKT
NSSRRQRGRRGSKRGSQGRTSAEQESLGHQVKHEGVLQQNTAMTHEEELI
HEEEDQKEEVKLGASNRGGQGGQAMGHGRGERVHARGRGRLARGGRQVGL
ANGSGRGGFVNGGSRGVLANESGRGGRFNRGGRGGRSNRGGRESHGNRGG
RGGHANRGGRGGRGRIGRRGG*
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mRNA from alignment at tig00000922_pilon:158538..159353+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3241.t1 ID=Ggra3241.t1|Name=Ggra3241.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=816bp|location=Sequence derived from alignment at tig00000922_pilon:158538..159353+ (Gracilaria gracilis GNS1m male)
ATGATGAACGAGTTCTCTGATCGCTTTTTGTTGGTGATTTCGAGGATGCC
GATCTCGTCAGTATCCCTCAGAAGGTATTTGTTTGAGGGAAAGAGGAAAC
GGGCTCTGGGTTTTGCTGCAAACGTTAACTTCGAGCCATGCGGGCTTGGG
TTGATCTGCAATGCACGGAATGAAGAGGATGAATGTAAACCTCTAAGTCT
GGACTCAGTGCATGGCGTGAATATAGCCCCCCGTCCGTGTGATGAACGTG
AAACCCAGAACCTCAACGTCAAGCTTCAAGAACAATGTTCCCTCAAAACA
AACAGTTCGAGACGTCAGCGAGGCCGCCGCGGAAGCAAAAGAGGAAGCCA
GGGAAGAACATCTGCGGAACAGGAAAGTCTTGGCCACCAAGTAAAGCACG
AGGGTGTATTGCAGCAAAATACGGCTATGACCCATGAGGAAGAGCTCATC
CATGAAGAAGAAGATCAGAAGGAAGAGGTGAAACTTGGTGCTTCTAATCG
AGGCGGCCAAGGTGGCCAGGCAATGGGACACGGCCGAGGTGAACGTGTCC
ACGCACGCGGCCGAGGTCGCCTTGCAAGAGGAGGCAGGCAAGTTGGTCTT
GCAAACGGAAGCGGCCGAGGTGGCTTCGTAAACGGAGGCAGCCGAGGTGT
TCTTGCAAACGAGAGCGGTCGAGGTGGCCGCTTTAATAGAGGCGGCCGAG
GTGGCCGCTCTAATAGAGGCGGCCGAGAAAGTCACGGAAACAGAGGCGGC
CGAGGTGGCCACGCAAACAGAGGCGGTCGAGGTGGGCGTGGAAGGATCGG
CCGCCGAGGTGGGTAG
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Coding sequence (CDS) from alignment at tig00000922_pilon:158538..159353+

>Ggra3241.t1 ID=Ggra3241.t1|Name=Ggra3241.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=816bp|location=Sequence derived from alignment at tig00000922_pilon:158538..159353+ (Gracilaria gracilis GNS1m male)
ATGATGAACGAGTTCTCTGATCGCTTTTTGTTGGTGATTTCGAGGATGCC
GATCTCGTCAGTATCCCTCAGAAGGTATTTGTTTGAGGGAAAGAGGAAAC
GGGCTCTGGGTTTTGCTGCAAACGTTAACTTCGAGCCATGCGGGCTTGGG
TTGATCTGCAATGCACGGAATGAAGAGGATGAATGTAAACCTCTAAGTCT
GGACTCAGTGCATGGCGTGAATATAGCCCCCCGTCCGTGTGATGAACGTG
AAACCCAGAACCTCAACGTCAAGCTTCAAGAACAATGTTCCCTCAAAACA
AACAGTTCGAGACGTCAGCGAGGCCGCCGCGGAAGCAAAAGAGGAAGCCA
GGGAAGAACATCTGCGGAACAGGAAAGTCTTGGCCACCAAGTAAAGCACG
AGGGTGTATTGCAGCAAAATACGGCTATGACCCATGAGGAAGAGCTCATC
CATGAAGAAGAAGATCAGAAGGAAGAGGTGAAACTTGGTGCTTCTAATCG
AGGCGGCCAAGGTGGCCAGGCAATGGGACACGGCCGAGGTGAACGTGTCC
ACGCACGCGGCCGAGGTCGCCTTGCAAGAGGAGGCAGGCAAGTTGGTCTT
GCAAACGGAAGCGGCCGAGGTGGCTTCGTAAACGGAGGCAGCCGAGGTGT
TCTTGCAAACGAGAGCGGTCGAGGTGGCCGCTTTAATAGAGGCGGCCGAG
GTGGCCGCTCTAATAGAGGCGGCCGAGAAAGTCACGGAAACAGAGGCGGC
CGAGGTGGCCACGCAAACAGAGGCGGTCGAGGTGGGCGTGGAAGGATCGG
CCGCCGAGGTGGGTAG
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