Ggra2629.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2629.t1
Unique NameGgra2629.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length225
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:988081..988755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2629Ggra2629Gracilaria gracilis GNS1m malegenetig00000005_pilon 988081..988755 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2629.t1.stop1Ggra2629.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 988081..988083 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2629.t1.CDS1Ggra2629.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 988081..988755 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2629.t1.exon1Ggra2629.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 988081..988755 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2629.t1.start1Ggra2629.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 988753..988755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2629.t1Ggra2629.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 988081..988755 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2629.t1 ID=Ggra2629.t1|Name=Ggra2629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=225bp
MSFAARYSQLRLWHQPLQSAIRQLTTGTATVPAKQYVRIAGPSSHACTSD
IINFLDEQSVAVDKSLRSLVLGQSDIYQNHSVWLYNASTQSNAEDIVSKI
SGKVLGLKLIRAAVVDQKVVDSMLNVQERPTSGRITLRRRLNTIGPAPDE
RGRTLLASNLPHLLQPRHLWGFFASYDVVDVRHLRRSGVACITFTSEDEA
ERALRERANLRLQGKQTIYLKMHQ*
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spliced messenger RNA

>Ggra2629.t1 ID=Ggra2629.t1|Name=Ggra2629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=675bp|location=Sequence derived from alignment at tig00000005_pilon:988081..988755- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGTTCGCTGCGCGCTACTCCCAGCTGCGTCTTTGGCACCAGCCGCT
GCAATCCGCCATCCGTCAGTTGACTACGGGAACCGCCACCGTTCCCGCCA
AGCAATATGTGCGAATCGCCGGTCCATCCAGCCATGCGTGCACTAGCGAC
ATTATCAACTTTCTAGATGAGCAGTCTGTAGCGGTGGACAAGTCCCTGAG
GTCGTTGGTGCTGGGTCAATCCGACATATATCAGAACCATTCTGTCTGGC
TCTATAACGCGAGCACACAATCCAATGCCGAGGATATTGTGTCCAAGATT
TCCGGAAAGGTGCTTGGTCTCAAGCTCATCCGCGCCGCCGTTGTCGATCA
GAAGGTCGTTGATTCGATGCTAAATGTTCAAGAACGTCCTACATCAGGTC
GCATCACGTTGAGAAGGCGACTGAATACGATTGGCCCCGCGCCGGATGAG
AGAGGTCGTACGTTGCTGGCTTCCAATTTGCCCCATTTATTGCAGCCCAG
GCATCTTTGGGGTTTCTTTGCCAGCTATGATGTCGTTGATGTCAGGCATC
TGAGAAGGTCTGGTGTGGCTTGCATTACCTTCACATCGGAAGATGAGGCT
GAACGCGCTTTGCGTGAGCGGGCTAACCTTAGGCTACAAGGGAAACAAAC
AATTTACCTTAAGATGCATCAATAA
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protein sequence of Ggra2629.t1

>Ggra2629.t1 ID=Ggra2629.t1|Name=Ggra2629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bp
MSFAARYSQLRLWHQPLQSAIRQLTTGTATVPAKQYVRIAGPSSHACTSD
IINFLDEQSVAVDKSLRSLVLGQSDIYQNHSVWLYNASTQSNAEDIVSKI
SGKVLGLKLIRAAVVDQKVVDSMLNVQERPTSGRITLRRRLNTIGPAPDE
RGRTLLASNLPHLLQPRHLWGFFASYDVVDVRHLRRSGVACITFTSEDEA
ERALRERANLRLQGKQTIYLKMHQ*
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mRNA from alignment at tig00000005_pilon:988081..988755-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2629.t1 ID=Ggra2629.t1|Name=Ggra2629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=675bp|location=Sequence derived from alignment at tig00000005_pilon:988081..988755- (Gracilaria gracilis GNS1m male)
ATGTCGTTCGCTGCGCGCTACTCCCAGCTGCGTCTTTGGCACCAGCCGCT
GCAATCCGCCATCCGTCAGTTGACTACGGGAACCGCCACCGTTCCCGCCA
AGCAATATGTGCGAATCGCCGGTCCATCCAGCCATGCGTGCACTAGCGAC
ATTATCAACTTTCTAGATGAGCAGTCTGTAGCGGTGGACAAGTCCCTGAG
GTCGTTGGTGCTGGGTCAATCCGACATATATCAGAACCATTCTGTCTGGC
TCTATAACGCGAGCACACAATCCAATGCCGAGGATATTGTGTCCAAGATT
TCCGGAAAGGTGCTTGGTCTCAAGCTCATCCGCGCCGCCGTTGTCGATCA
GAAGGTCGTTGATTCGATGCTAAATGTTCAAGAACGTCCTACATCAGGTC
GCATCACGTTGAGAAGGCGACTGAATACGATTGGCCCCGCGCCGGATGAG
AGAGGTCGTACGTTGCTGGCTTCCAATTTGCCCCATTTATTGCAGCCCAG
GCATCTTTGGGGTTTCTTTGCCAGCTATGATGTCGTTGATGTCAGGCATC
TGAGAAGGTCTGGTGTGGCTTGCATTACCTTCACATCGGAAGATGAGGCT
GAACGCGCTTTGCGTGAGCGGGCTAACCTTAGGCTACAAGGGAAACAAAC
AATTTACCTTAAGATGCATCAATAA
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Coding sequence (CDS) from alignment at tig00000005_pilon:988081..988755-

>Ggra2629.t1 ID=Ggra2629.t1|Name=Ggra2629.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=675bp|location=Sequence derived from alignment at tig00000005_pilon:988081..988755- (Gracilaria gracilis GNS1m male)
ATGTCGTTCGCTGCGCGCTACTCCCAGCTGCGTCTTTGGCACCAGCCGCT
GCAATCCGCCATCCGTCAGTTGACTACGGGAACCGCCACCGTTCCCGCCA
AGCAATATGTGCGAATCGCCGGTCCATCCAGCCATGCGTGCACTAGCGAC
ATTATCAACTTTCTAGATGAGCAGTCTGTAGCGGTGGACAAGTCCCTGAG
GTCGTTGGTGCTGGGTCAATCCGACATATATCAGAACCATTCTGTCTGGC
TCTATAACGCGAGCACACAATCCAATGCCGAGGATATTGTGTCCAAGATT
TCCGGAAAGGTGCTTGGTCTCAAGCTCATCCGCGCCGCCGTTGTCGATCA
GAAGGTCGTTGATTCGATGCTAAATGTTCAAGAACGTCCTACATCAGGTC
GCATCACGTTGAGAAGGCGACTGAATACGATTGGCCCCGCGCCGGATGAG
AGAGGTCGTACGTTGCTGGCTTCCAATTTGCCCCATTTATTGCAGCCCAG
GCATCTTTGGGGTTTCTTTGCCAGCTATGATGTCGTTGATGTCAGGCATC
TGAGAAGGTCTGGTGTGGCTTGCATTACCTTCACATCGGAAGATGAGGCT
GAACGCGCTTTGCGTGAGCGGGCTAACCTTAGGCTACAAGGGAAACAAAC
AATTTACCTTAAGATGCATCAATAA
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