Ggra258.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra258.t1
Unique NameGgra258.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length727
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000324_piloncontigtig00000324_pilon:9593..18045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog55529.EKX44016
Preferred namemetH
PFAMsB12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
Max annot lvl2759|Eukaryota
KEGG rclassRC00035,RC00113,RC01241
KEGG koko:K00548
KEGG ReactionR00946,R09365
KEGG Pathwayko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230
KEGG ModuleM00017
Evalue2.03e-45
EggNOG OGsCOG0646@1|root,KOG1579@2759|Eukaryota
EC2.1.1.13
Descriptionbetaine-homocysteine S-methyltransferase activity
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra258Ggra258Gracilaria gracilis GNS1m malegenetig00000324_pilon 9593..18045 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1Ggra258.t1Gracilaria gracilis GNS1m malepolypeptidetig00000324_pilon 9593..18045 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1.start1Ggra258.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000324_pilon 9593..9595 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1.CDS1Ggra258.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000324_pilon 9593..9606 +
Ggra258.t1.CDS2Ggra258.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000324_pilon 9670..10410 +
Ggra258.t1.CDS3Ggra258.t1.CDS3Gracilaria gracilis GNS1m maleCDStig00000324_pilon 11165..11554 +
Ggra258.t1.CDS4Ggra258.t1.CDS4Gracilaria gracilis GNS1m maleCDStig00000324_pilon 11753..11916 +
Ggra258.t1.CDS5Ggra258.t1.CDS5Gracilaria gracilis GNS1m maleCDStig00000324_pilon 12350..12556 +
Ggra258.t1.CDS6Ggra258.t1.CDS6Gracilaria gracilis GNS1m maleCDStig00000324_pilon 12698..13041 +
Ggra258.t1.CDS7Ggra258.t1.CDS7Gracilaria gracilis GNS1m maleCDStig00000324_pilon 17648..17786 +
Ggra258.t1.CDS8Ggra258.t1.CDS8Gracilaria gracilis GNS1m maleCDStig00000324_pilon 17864..18045 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1.exon1Ggra258.t1.exon1Gracilaria gracilis GNS1m maleexontig00000324_pilon 9593..9606 +
Ggra258.t1.exon2Ggra258.t1.exon2Gracilaria gracilis GNS1m maleexontig00000324_pilon 9670..10410 +
Ggra258.t1.exon3Ggra258.t1.exon3Gracilaria gracilis GNS1m maleexontig00000324_pilon 11165..11554 +
Ggra258.t1.exon4Ggra258.t1.exon4Gracilaria gracilis GNS1m maleexontig00000324_pilon 11753..11916 +
Ggra258.t1.exon5Ggra258.t1.exon5Gracilaria gracilis GNS1m maleexontig00000324_pilon 12350..12556 +
Ggra258.t1.exon6Ggra258.t1.exon6Gracilaria gracilis GNS1m maleexontig00000324_pilon 12698..13041 +
Ggra258.t1.exon7Ggra258.t1.exon7Gracilaria gracilis GNS1m maleexontig00000324_pilon 17648..17786 +
Ggra258.t1.exon8Ggra258.t1.exon8Gracilaria gracilis GNS1m maleexontig00000324_pilon 17864..18045 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1.intron1Ggra258.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000324_pilon 9607..9669 +
Ggra258.t1.intron2Ggra258.t1.intron2Gracilaria gracilis GNS1m maleintrontig00000324_pilon 10411..11164 +
Ggra258.t1.intron3Ggra258.t1.intron3Gracilaria gracilis GNS1m maleintrontig00000324_pilon 11555..11752 +
Ggra258.t1.intron4Ggra258.t1.intron4Gracilaria gracilis GNS1m maleintrontig00000324_pilon 11917..12349 +
Ggra258.t1.intron5Ggra258.t1.intron5Gracilaria gracilis GNS1m maleintrontig00000324_pilon 12557..12697 +
Ggra258.t1.intron6Ggra258.t1.intron6Gracilaria gracilis GNS1m maleintrontig00000324_pilon 13042..17647 +
Ggra258.t1.intron7Ggra258.t1.intron7Gracilaria gracilis GNS1m maleintrontig00000324_pilon 17787..17863 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra258.t1.stop1Ggra258.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000324_pilon 18043..18045 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra258.t1 ID=Ggra258.t1|Name=Ggra258.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=727bp
MGEFNFSPLFEPNPFTDPLIDILKEGNKPYSTELYQKLCNAIARFMWVNA
LPFDVDQPIFQSIFRRTVKSYPWFGDHELTTLKIFSIIQDYHQRLHGNFV
KHIRRVTEPRLDHFIRIYIHCLYLIGGKVVLSFVADVDRDGKYVVYMGSL
TVFYEEVTYNIFEEQMLCLLEEYVKVENISCLAGNAFACNELVKLFCIRH
KIVRYCYVELSKAVNYIILENISSTTLSIYRGRVQTQLRKVYLFGVWNLA
IRESAIEREKKEAEAALATILGSFEKAVAALQGTKDENSRLLVEFEATEE
EVDRLKKQLINNLRPSLEKLSKEVQTLEAKAFDISSTFEDAKEELQKEKD
RMASSNKSIWTARQNTEELSEKIEALNLEAARLSKKINKKAMHMFETAKE
ENRGLLKKKAIIEEDTPGIVFATLWEDAAVPPLLILSVDEFMRHAKLAKR
YGAAVVVMGFDEEGQAASRDDRVRICARAYKILVEDVKFNPNDIIFDPNI
LTVDTAMHSAFLYYGITNGMDMGIVNAGVIPVYLDIPEKLLNLIEDFLLN
RSSEATENLLEFSLNMDKKSSLGGGTDADKNKWRSLQVKERLSHALVKGI
DEFVLGDVEEARQAADKPLDMAGVPSKLYQEYSRVGTRRDLFEWIRGSRC
SRRQRNENVGMKAGFLAKSSCITAKSSKSISSSPSSRAPDLVYSSSKNLE
YGCPLDSPVTELEGIASAVAPNLRVA*
back to top

spliced messenger RNA

>Ggra258.t1 ID=Ggra258.t1|Name=Ggra258.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2181bp|location=Sequence derived from alignment at tig00000324_pilon:9593..18045+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGAATTCAACTTCTCTCCATTATTTGAACCAAATCCGTTTACTGA
TCCTCTGATTGACATACTTAAAGAAGGCAACAAACCGTACTCCACAGAAC
TTTACCAGAAACTATGTAACGCAATCGCCAGATTTATGTGGGTGAACGCA
TTACCATTTGATGTAGATCAACCAATCTTCCAGTCGATTTTTCGTAGAAC
TGTGAAATCATATCCATGGTTTGGAGACCACGAATTGACCACGCTAAAGA
TTTTCAGCATCATTCAGGACTATCATCAGCGATTGCACGGTAACTTTGTG
AAGCACATACGCCGAGTGACAGAACCACGTCTCGATCATTTCATTAGAAT
CTATATACATTGTTTGTATCTGATTGGAGGAAAAGTGGTGCTGAGTTTTG
TTGCTGACGTTGACCGCGATGGAAAGTATGTTGTGTATATGGGATCCCTT
ACGGTATTTTATGAAGAAGTTACTTATAATATCTTTGAAGAGCAGATGCT
TTGTTTGCTCGAAGAGTATGTGAAGGTCGAAAATATTTCGTGTCTTGCGG
GAAATGCGTTTGCGTGCAATGAATTGGTTAAACTCTTTTGTATTCGTCAC
AAGATCGTTCGGTATTGTTATGTGGAATTATCGAAGGCTGTCAATTACAT
TATTCTTGAAAACATATCAAGTACAACGTTAAGTATTTACCGCGGACGTG
TACAGACCCAGCTTCGCAAAGTGTACCTGTTCGGGGTCTGGAATCTTGCA
ATCAGGGAAAGTGCAATAGAAAGGGAGAAGAAAGAAGCCGAAGCAGCTCT
TGCGACCATTCTTGGCTCGTTCGAGAAAGCCGTAGCCGCCCTCCAGGGCA
CCAAGGACGAGAATTCACGTCTCCTCGTTGAATTTGAAGCAACAGAGGAG
GAGGTCGACAGACTTAAGAAGCAGCTCATAAATAATCTCCGTCCGTCTTT
GGAAAAACTCAGCAAAGAAGTTCAAACTCTGGAGGCTAAGGCTTTCGACA
TCAGTTCTACTTTTGAggatgctaaagaggagctgcagaaggagaaagac
cgaatggccagctcgaacaaatccataTGGACTGCTCGACAGAACACTGA
AGAACTTTCAGAAAAGATTGAAGCACTCAATCTCGAAGCGGCACGCCTCT
CAAAGAAGATAAACAAGAAGGCTATGCACATGTTCGAAACAGCAAAGGAG
GAAAACAGAGGATTGTTGAAGAAGAAGGCAATTATCGAGGAAGACACTCC
AGGGATCGTCTTTGCAACATTGTGGGAGGATGCTGCGGTTCCACCCCTGC
TCATATTAAGCGTGGACGAATTTATGAGACATGCTAAGCTCGCGAAGCGA
TACGGAGCCGCGGTCGTTGTCATGGGTTTTGATGAGGAAGGTCAAGCAGC
GAGTCGTGATGACAGAGTTAGGATTTGTGCTAGGGCGTATAAGATCCTGG
TAGAAGACGTCAAGTTCAATCCAAATGACATTATTTTCGATCCGAATATC
CTTACGGTTGAcactgCAATGCACTCAGCTTTCTTGTACTATGGTATCAC
GAATGGGATGGATATGGGTATCGTCAACGCAGGTGTTATCCCCGTCTATT
TGGACATCCCTGAGAAGCTATTGAATCTCATTGAAGATTTTCTCCTTAAT
CGTTCTTCTGAAGCCACAGAGAATCTTCTAGAATTCTCGCTCAACATGGA
CAAGAAGAGTTCCCTCGGTGGTGGTACTGATGCAGACAAAAACAAATGGC
GTTCACTGCAGGTGAAGGAAAGACTTTCACACGCTCTTGTGAAGGGTATT
GATGAGTTTGTTCTCGGGGATGTTGAAGAAGCTCGCCAGGCCGCGgacaa
acctctggacATGGCGGGCGTACCGTCTAAGCTCTATCAAGAATACTCGC
GTGTGGGGACGAGAAGGGATTTGTTTGAATGGATAAGGGGCTCAAGATGT
TCTCGACGGCAGAGAAACGAAAACGTGGGTATGAAAGCCGGCTTCTTAGC
AAAGTCCAGTTGCATAACCGCCAAATCCTCTAAGTCCATATCATCTTCCC
CTTCTTCCAGAGCTCCAGATTTAGTATACTCGTCGTCCAAAAACCTTGAG
TATGGCTGTCCACTTGACTCCCCTGTCACTGAACTTGAAGGCATAGCATC
AGCCGTAGCCCCGAACCTCAGAGTTGCGTAG
back to top

protein sequence of Ggra258.t1

>Ggra258.t1 ID=Ggra258.t1|Name=Ggra258.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=727bp
MGEFNFSPLFEPNPFTDPLIDILKEGNKPYSTELYQKLCNAIARFMWVNA
LPFDVDQPIFQSIFRRTVKSYPWFGDHELTTLKIFSIIQDYHQRLHGNFV
KHIRRVTEPRLDHFIRIYIHCLYLIGGKVVLSFVADVDRDGKYVVYMGSL
TVFYEEVTYNIFEEQMLCLLEEYVKVENISCLAGNAFACNELVKLFCIRH
KIVRYCYVELSKAVNYIILENISSTTLSIYRGRVQTQLRKVYLFGVWNLA
IRESAIEREKKEAEAALATILGSFEKAVAALQGTKDENSRLLVEFEATEE
EVDRLKKQLINNLRPSLEKLSKEVQTLEAKAFDISSTFEDAKEELQKEKD
RMASSNKSIWTARQNTEELSEKIEALNLEAARLSKKINKKAMHMFETAKE
ENRGLLKKKAIIEEDTPGIVFATLWEDAAVPPLLILSVDEFMRHAKLAKR
YGAAVVVMGFDEEGQAASRDDRVRICARAYKILVEDVKFNPNDIIFDPNI
LTVDTAMHSAFLYYGITNGMDMGIVNAGVIPVYLDIPEKLLNLIEDFLLN
RSSEATENLLEFSLNMDKKSSLGGGTDADKNKWRSLQVKERLSHALVKGI
DEFVLGDVEEARQAADKPLDMAGVPSKLYQEYSRVGTRRDLFEWIRGSRC
SRRQRNENVGMKAGFLAKSSCITAKSSKSISSSPSSRAPDLVYSSSKNLE
YGCPLDSPVTELEGIASAVAPNLRVA*
back to top

mRNA from alignment at tig00000324_pilon:9593..18045+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra258.t1 ID=Ggra258.t1|Name=Ggra258.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=8453bp|location=Sequence derived from alignment at tig00000324_pilon:9593..18045+ (Gracilaria gracilis GNS1m male)
ATGGGTGAATTCAAGTACGTACTAAAACAAACCAACTTTTTGACTACAAT GTACGACTAACAACCTCAATTGCTAAGCTTCTCTCCATTATTTGAACCAA ATCCGTTTACTGATCCTCTGATTGACATACTTAAAGAAGGCAACAAACCG TACTCCACAGAACTTTACCAGAAACTATGTAACGCAATCGCCAGATTTAT GTGGGTGAACGCATTACCATTTGATGTAGATCAACCAATCTTCCAGTCGA TTTTTCGTAGAACTGTGAAATCATATCCATGGTTTGGAGACCACGAATTG ACCACGCTAAAGATTTTCAGCATCATTCAGGACTATCATCAGCGATTGCA CGGTAACTTTGTGAAGCACATACGCCGAGTGACAGAACCACGTCTCGATC ATTTCATTAGAATCTATATACATTGTTTGTATCTGATTGGAGGAAAAGTG GTGCTGAGTTTTGTTGCTGACGTTGACCGCGATGGAAAGTATGTTGTGTA TATGGGATCCCTTACGGTATTTTATGAAGAAGTTACTTATAATATCTTTG AAGAGCAGATGCTTTGTTTGCTCGAAGAGTATGTGAAGGTCGAAAATATT TCGTGTCTTGCGGGAAATGCGTTTGCGTGCAATGAATTGGTTAAACTCTT TTGTATTCGTCACAAGATCGTTCGGTATTGTTATGTGGAATTATCGAAGG CTGTCAATTACATTATTCTTGAAAACATATCAAGTACAACGTTAAGTATT TACCGCGGACGTGTACAGACCCAGCTTCGCAAAGTGTACCTGTTCGGGGT CTGGAATCTTGCAATCAGGTACCCCGAAACTTGGGGTCGTTTCTACAATG TGGAAGAATCTCTTCTAATTTCAGTAAGTTCAAATCCTCTTTCTTCAGCA AAGCATCATATCCTACTTACAATCAGGTTTATTGTTTTAGATTGGAGATA AGACGATGACTATTAAGTAACAAGCGTGTCGGTTTTGTTTCCGCCTTTTC TTTGCGAATGAAATACTTGCGAAGAACGAAAACGGTTTTGTAAAGTGAAA GCGCGATAATTGAAGGCATTTCTACAATTCCTACTCGTCAGTCTTCATTT TCTTCACCCCCTCTTATCATTGTTTGAGGCGAACTACATCGTCGTTAGTC CGCGACGCTCCAAGGGCGAGAACTGTGACGCTAGACGGAGAAAGTTATGa tccctccggtacagcatccggtggttcttcaacgcagtcccgatcgtcgg tcttggatctgctaaccaatctatctcaagcggaatctgaattggaaatt catcgtgggaatgttgcCCGGCTCCAAAAACGCGTAGACATGGTCCATGA GCGAGCAAGTAGATATCGTCAGCTTCAGACAACAGTTCAAGTTCGCGGAG ATGAAGCTAAACTACTTGAGCAGCAACTGGAAGAGACTTCAACGGGAAGA ATTATGAAGGAGGTGGAGTTTTTTGAGAATACGAGTTGCATAGATACCCT CCGCCCTCACAAAGGCAAAAGAATGTCTCCGAGAGAACTGTAATAAGGCC CAAGAGCTGGAACTCAAAACAGGGAAAGTGCAATAGAAAGGGAGAAGAAA GAAGCCGAAGCAGCTCTTGCGACCATTCTTGGCTCGTTCGAGAAAGCCGT AGCCGCCCTCCAGGGCACCAAGGACGAGAATTCACGTCTCCTCGTTGAAT TTGAAGCAACAGAGGAGGAGGTCGACAGACTTAAGAAGCAGCTCATAAAT AATCTCCGTCCGTCTTTGGAAAAACTCAGCAAAGAAGTTCAAACTCTGGA GGCTAAGGCTTTCGACATCAGTTCTACTTTTGAggatgctaaagaggagc tgcagaaggagaaagaccgaatggccagctcgaacaaatccataTGGACT GCTCGACAGAACACTGAAGAACTTTCAGAAAAGATTGAAGCACTCAATCT CGAAGCGGCACGGTTAACGCGCAGGgtgaaggagtctgaacgaggtgaaa caagtgcgaagaaactggttgaagaactGGATGCGAGTTTTGCATGGATC TCCGAGGAGAAaggtgagtttggagctgagggctcagaatatgaattctc ggattcaaagctcgcatcaaactccagtactctagaaaaccttgagcgtc gacaaAAAAGCCTCTCAAAGAAGATAAACAAGAAGGCTATGCACATGTTC GAAACAGCAAAGGAGGAAAACAGAGGATTGTTGAAGAAGAAGGCAATTAT CGAGGAAGACACTCCAGGGATCGTCTTTGCAACATTGTGGGAGGATGCTG CGGTTCCACCCCTGCTCATATTAAGTCCATTGTCGAGGCCTTTAGCAAGG TTGCGCCGAAGGCACCACCGAAACCCCTTCCGAACATGATGAGACTCTCA GGTTTGGACcagtttgtgttagacccaggtctcgttcggtttgtcaatgt tggcgagaggtgtaaAGTTGCTGGTTCTATGTTCTTCAAGAAGCAAGTTT GGCTGGAAATTACGAGAAAatgcaagagatcgcgttgaagcaggttgaaa atggagctcaggttctggatatcaattttgatgagggcctgAttgactct catgctgtgatgagaaagttctgcaatcttctggccaccgaacctgatgt tgccaaagttccctttatgattgattcctcaaagtttgatgtcgtTGAAC AGGGTCTTCAGTGTATACAGGGCAAGTGTATTGTCAACTCTATTTCTCTC AAGGTAGGCGTGGACGAATTTATGAGACATGCTAAGCTCGCGAAGCGATA CGGAGCCGCGGTCGTTGTCATGGGTTTTGATGAGGAAGGTCAAGCAGCGA GTCGTGATGACAGAGTTAGGATTTGTGCTAGGGCGTATAAGATCCTGGTA GAAGACGTCAAGTTCAATCCAAATGACATTATTTTCGATCCGAATATCCT TACGGTTGAcactggtatcgaggagcataacaactacgcgaaagatttct tcgaggccacgaagttaatcaaagaaactttgcctcactgccacatttcg ggtggtgtttctaacatttccttttcgttccgtggAAACAATGCCCTTCG AGAAGCAATGCACTCAGCTTTCTTGTACTATGGTATCACGAATGGGATGG ATATGGGTATCGTCAACGCAGGTGTTATCCCCGTCTATTTGGACATCCCT GAGAAGCTATTGAATCTCATTGAAGATTTTCTCCTTAATCGTTCTTCTGA AGCCACAGAGAATCTTCTAGAATTCTCGCTCAACATGGACAAGAAGAGTT CCCTCGGTGGTGGTACTGATGCAGACAAAAACAAATGGCGTTCACTGCAG GTGAAGGAAAGACTTTCACACGCTCTTGTGAAGGGTATTGATGAGTTTGT TCTCGGGGATGTTGAAGAAGCTCGCCAGGCCGCGgacaaacctctggacg tcattgaaggtcctctaatggacggtatgaacatagttggcgacctattc ggtgctggaaagatgtttttgccacaagtcatcaaatctgctcgagtaat gaaaaaggctgtagctgttttaatcccatacatggaggcggagaaagaag cgaaaattgccgaggcccaagcgagaggagaaactgccacagaagacgat atgtatgccggtacgatggtaattgcaactgtgaagggagacgtacatga cattggaaagaacatcgtggcggttgtgctgggttgcaacaaatacaagg ttgtagatctcggagtcatgtgcccctgcgataagattattgacgctgcg agggggcacaaagccaacgtcattggtctttctggattgattaccccttc cctcgacgaaatggtttacgtcgccgccaggctagagaaagaaaagatga agattcctctactcattagcggagcaaccacttctaagatgcacactgcg gtcaaggtcgcacctcgttacaacgctcctacagttcatgccctggatgc atctcgagcagtgactgtggtttcatctttgcttgatgagaacaacaacg aggatttcattgaagatgttgccgagaagtacgaagagcttcgtgaagaa cattatgcaggacttgaagaacgaaagtatgttgatctgaagcaggcccg ggagcataaacggaagatcgacttcactggttctgaaccgcctgcttgta ggcctgggttcttgagtgttgaggtgttgcgagagtatcctctggaagag cttttgccctatattgactggaacccattctttcagacatggcagctaag gggaaagtatgcaaacagaggatatccgaagatatttaaagatgaaacag ttggagccgaagcaaagaagcttcacgatgaggcgcgagctattctcggt gattatgtagagaacaaaaagctgaccgcaaatggagttttgggtttctt cccggctaacactgtcaatcacgacgatatcgaagtttacgcaccagagg acgatgatatcagagcgaatgcagccgaaacatatcgcactctgcgtcac caagccaagaaagaggatgatgagacaccatacttggctatggctgattt cattgcaccgaagaaaaccggattgaaggattacattggaatgtttgctg tcggcatttttggagctgaagatcttattgccaagtataaggaagcattg gacgattatcgtgtgatcatgtgcgaagccctcgcagatcgtcttgctga agcattcgccgaaaagctccacgaagacgtgagaaacaagacttagtttt ggggctacactaagggcaatgagaagttatccacagaggaccttatcaag atccgctatgagggtattcgcccggctccaggttatccgtcccaacctga tcacactgagaagcttgccatgtggaatctgcttgacgccgaagtaagcg ctgatttaagactgacagaaagtctcgccatgcttcctgctgcagctgtt tcgggcctgtattttgcgcatcagaagtcacaatACTTCGCTGTTGGGAA GGtcactaaggagcaggcgacagactatggtgaaaagcgcaagggatgga atacCGCTAAGACTGAGAGCTGCTGCCCTCAGTACAATGCAACGGTAGAT AGAAAGCTATCAGGACTTTtcagcaacatcacacacgcgacgtctgttag agctatgctcagaagatcaacgagcataagcgctctttatccgccgtcgt tcctcgtgaggcacgcattcagtctgcgttcttcccctcaccatgcctac tatgcccacaacttcgtcagccccccacatcttttctggctccagtgagc tggacgtaacgcaagcggccacagctctgcgttccggtcaactggtagcc tttccaacagagactgtctacggactcggtgccAACGCTTTGAACTCGAC GTCCGTCAAtgctatttttgaagcgaaggggagaccttctgacaatccgt taatcgtgcacgtatcttcgttgaacgacatctctTACCACTGtctcaca ccccccctgcctccgattacgttgcgactcgcatcttcgttctggcctgg ccctcttacgatggttctgccgctctcacgacatgcacgccttgccgctg cagtaacggctgttttaccttcagtagcgcttcgaatacccaagcaccct gtggctcccgcattattgtcaaaggctgctgttcctgtcgctgctccgag cgccaatctttctggacgtccgagcccaacctctgcacgacacgttctac aagatctttccggaagaatctttggagtggttgacggtggaaagctacaa gcggatcagtgtggcctggagagcaccgtcgttgacttgaatgacccaat ttcgcccaccgtcttgggaccgggggctgtttcaatcgcccaacttgaaa aagtaagcggcgtagcgtttgcgcgggcaaagtattcttcggagaaaccc aaagcgccaggtatgacgtaccgacattacgcgccgaagccaccgatgcg tctgatttcgaacaaggtttcggaacagatatcgtcgctcttggggcagg gaaagcgagtcggtctgctggcggacgaatcaatatgcgcacgatttcga aacatggaacgcatcgcaatcgtcccgtgtggaaaacgagataataccga aagctacgcaagagagctctatggcgccttgcgggcattcgatggagagg gcgacaatgccgttgcgcatgttgatattattgttgctgttccccctaca aatgtggtggatggcatcggcgaggctgtcatgaatcgtctgaagaaggc ctcagccggcggtgacctgaagtcaaccTGACGTGCATAATCGGAAACGT TCGCATACTGCGATACCGCGATACTGGGATGAAGACTACAAGAAGGggaa ttgaagtggggacgataatcgtatgaacgatatgttgagaagtcgcatgg taacgttaagccgaaacccgcaggtttgaaaacgttttagttaatataca aggtcttactactaactcacaattccgataccagtggatcgtttcttggt gcataagcgggtaatttgtcccaatcttcgaatggaacgacttgtacaat gctggggctgtgttcaccgtcggtggctacttcgtcgtcttcgtctttgg agtcgaaccatttgatacttcttctccctggtttcggagcttccttccgg catggccatgtctcacatatgtcctttgtcgacacaatattgtctggtga ttttgtcatatgctccatttcaggcatgagttctctcgccaactggacga gtctattctcattcaacgtcttagagcggaactcttctccgcctccaagc aacattacgtcgcccagatccccccttggatactcagccgccactcttgc agcctcgtgaaaaggaatactggccatgtacaccccacccatttcaacgc ttcctggataactggcagccctgagccccctttgtcgttcatacacaaca cggtcgaacatgacccgaccaccacgcccaactctgccacgtgcacgaaT CGTGCGATGTATTTTGCGGGCTGGTTGAACGGGAAGAGATGCAGTTGGAG GGGTTGTGTTTAAAATATCGCCGGCAatgtcttcagttgtgacgaatcga cgaggatcagtcttcgcgcctgcaccaaatctgccaccaaatctaccgaa ctttacactcgaactggggatggttacTGGATGCGGTTCTCGCGTTGACA GGTTCGACTTCGGGTTCAATTAATGATAAGGAGAACACCGAAAACCAATC TAGAGAGAAAACAAGAGGCCGAAAACGTGCTTTACGTGACTGAAAGGAAT GCGCACATAGGAGCGAAATCTTTGACGTAGCTCTTCTTATTGCTTATAGC CATCTATGACTGAAACAAGGAATGAAACCAATGTGTTTATGTAGAAATGT ATTCGTGTTACGGACGAACCAGCACTTTGAAGGCAAACTCATGAGCTTGG TTATGATGTTTTGTACTCGTTTACATTTACAAAATCATACAGTGACAGGG AAAAAAAGTTAGGTTGAGCCCGTTCAAGGAGTTATGCATGGAGACGAACA GTTCTGTCCATTGGTAAAAACTGTTCTCTACCGAAAAAGACTTCTGTCTT GATACCTAGCATGTCAGAAGCCAAAGGTTGAGTCAATTGCAGGTAGGTTT AGAGAATGTAAAGCTAGACAAGTTCCAATACGAGCAAAGAAACCTGTGAA AGTAAATGCTAGCCTTCTTCGCGTACCGAACCGCACAATACTGAGCCCGA GAAGCATGCCAATGTACAGAGGAAGGCTGATGACGTTCAACCTTTACTGT CAAGACTCTAGATACAACTACTGCATTTCCTACGATAACTTTAACCATCT CTAGAGGACCCAATGCAAGTCAGCATACTGCCAAATATCTGCTAAATGGG GACAGAGGCGGAAATGGAAGATTAAACAAATGAGAGGCTTCCAAATGAGT GGCAGATGGCGGGCGTACCGTCTAAGCTCTATCAAGAATACTCGCGTGTG GGGACGAGAAGGGATTTGTTTGAATGGATAAGGGGCTCAAGATGTTCTCG ACGGCAGAGAAACGAAAACGTGGGTATGAAAGCCGGCTTCTTAGGTATGT CTAAGTGAGTTCAGCTATAATGCTGTCCGACTCATTCTCTGGTAGCACTT CATTTTCTTCATGGCATGCAGCAAAGTCCAGTTGCATAACCGCCAAATCC TCTAAGTCCATATCATCTTCCCCTTCTTCCAGAGCTCCAGATTTAGTATA CTCGTCGTCCAAAAACCTTGAGTATGGCTGTCCACTTGACTCCCCTGTCA CTGAACTTGAAGGCATAGCATCAGCCGTAGCCCCGAACCTCAGAGTTGCG TAG
back to top

Coding sequence (CDS) from alignment at tig00000324_pilon:9593..18045+

>Ggra258.t1 ID=Ggra258.t1|Name=Ggra258.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2181bp|location=Sequence derived from alignment at tig00000324_pilon:9593..18045+ (Gracilaria gracilis GNS1m male)
ATGGGTGAATTCAACTTCTCTCCATTATTTGAACCAAATCCGTTTACTGA
TCCTCTGATTGACATACTTAAAGAAGGCAACAAACCGTACTCCACAGAAC
TTTACCAGAAACTATGTAACGCAATCGCCAGATTTATGTGGGTGAACGCA
TTACCATTTGATGTAGATCAACCAATCTTCCAGTCGATTTTTCGTAGAAC
TGTGAAATCATATCCATGGTTTGGAGACCACGAATTGACCACGCTAAAGA
TTTTCAGCATCATTCAGGACTATCATCAGCGATTGCACGGTAACTTTGTG
AAGCACATACGCCGAGTGACAGAACCACGTCTCGATCATTTCATTAGAAT
CTATATACATTGTTTGTATCTGATTGGAGGAAAAGTGGTGCTGAGTTTTG
TTGCTGACGTTGACCGCGATGGAAAGTATGTTGTGTATATGGGATCCCTT
ACGGTATTTTATGAAGAAGTTACTTATAATATCTTTGAAGAGCAGATGCT
TTGTTTGCTCGAAGAGTATGTGAAGGTCGAAAATATTTCGTGTCTTGCGG
GAAATGCGTTTGCGTGCAATGAATTGGTTAAACTCTTTTGTATTCGTCAC
AAGATCGTTCGGTATTGTTATGTGGAATTATCGAAGGCTGTCAATTACAT
TATTCTTGAAAACATATCAAGTACAACGTTAAGTATTTACCGCGGACGTG
TACAGACCCAGCTTCGCAAAGTGTACCTGTTCGGGGTCTGGAATCTTGCA
ATCAGGGAAAGTGCAATAGAAAGGGAGAAGAAAGAAGCCGAAGCAGCTCT
TGCGACCATTCTTGGCTCGTTCGAGAAAGCCGTAGCCGCCCTCCAGGGCA
CCAAGGACGAGAATTCACGTCTCCTCGTTGAATTTGAAGCAACAGAGGAG
GAGGTCGACAGACTTAAGAAGCAGCTCATAAATAATCTCCGTCCGTCTTT
GGAAAAACTCAGCAAAGAAGTTCAAACTCTGGAGGCTAAGGCTTTCGACA
TCAGTTCTACTTTTGAggatgctaaagaggagctgcagaaggagaaagac
cgaatggccagctcgaacaaatccataTGGACTGCTCGACAGAACACTGA
AGAACTTTCAGAAAAGATTGAAGCACTCAATCTCGAAGCGGCACGCCTCT
CAAAGAAGATAAACAAGAAGGCTATGCACATGTTCGAAACAGCAAAGGAG
GAAAACAGAGGATTGTTGAAGAAGAAGGCAATTATCGAGGAAGACACTCC
AGGGATCGTCTTTGCAACATTGTGGGAGGATGCTGCGGTTCCACCCCTGC
TCATATTAAGCGTGGACGAATTTATGAGACATGCTAAGCTCGCGAAGCGA
TACGGAGCCGCGGTCGTTGTCATGGGTTTTGATGAGGAAGGTCAAGCAGC
GAGTCGTGATGACAGAGTTAGGATTTGTGCTAGGGCGTATAAGATCCTGG
TAGAAGACGTCAAGTTCAATCCAAATGACATTATTTTCGATCCGAATATC
CTTACGGTTGAcactgCAATGCACTCAGCTTTCTTGTACTATGGTATCAC
GAATGGGATGGATATGGGTATCGTCAACGCAGGTGTTATCCCCGTCTATT
TGGACATCCCTGAGAAGCTATTGAATCTCATTGAAGATTTTCTCCTTAAT
CGTTCTTCTGAAGCCACAGAGAATCTTCTAGAATTCTCGCTCAACATGGA
CAAGAAGAGTTCCCTCGGTGGTGGTACTGATGCAGACAAAAACAAATGGC
GTTCACTGCAGGTGAAGGAAAGACTTTCACACGCTCTTGTGAAGGGTATT
GATGAGTTTGTTCTCGGGGATGTTGAAGAAGCTCGCCAGGCCGCGgacaa
acctctggacATGGCGGGCGTACCGTCTAAGCTCTATCAAGAATACTCGC
GTGTGGGGACGAGAAGGGATTTGTTTGAATGGATAAGGGGCTCAAGATGT
TCTCGACGGCAGAGAAACGAAAACGTGGGTATGAAAGCCGGCTTCTTAGC
AAAGTCCAGTTGCATAACCGCCAAATCCTCTAAGTCCATATCATCTTCCC
CTTCTTCCAGAGCTCCAGATTTAGTATACTCGTCGTCCAAAAACCTTGAG
TATGGCTGTCCACTTGACTCCCCTGTCACTGAACTTGAAGGCATAGCATC
AGCCGTAGCCCCGAACCTCAGAGTTGCGTAG
back to top