Ggra2294.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2294.t1
Unique NameGgra2294.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length351
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:47703..48755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2294Ggra2294Gracilaria gracilis GNS1m malegenetig00000122_pilon 47703..48755 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2294.t1.stop1Ggra2294.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000122_pilon 47703..47705 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2294.t1.CDS1Ggra2294.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000122_pilon 47703..48755 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2294.t1.exon1Ggra2294.t1.exon1Gracilaria gracilis GNS1m maleexontig00000122_pilon 47703..48755 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2294.t1.start1Ggra2294.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000122_pilon 48753..48755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2294.t1Ggra2294.t1Gracilaria gracilis GNS1m malepolypeptidetig00000122_pilon 47703..48755 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2294.t1 ID=Ggra2294.t1|Name=Ggra2294.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=351bp
MESPAFAAPIAIGSTPFNGKSTICARRAMRTNRVSMLVSSPADSFMNKSQ
TREAKQAATSTGVYTPQCTEATGGCNTAEATRLASLARSFRLRQMSASSK
MKDLYDTRRAAIIAAAGSHVDESYAVSFPARAAATVAGRAEMLRACSRYV
VANEPAQQYMFECVDRQYKAVNVPGAVYSVGAYNARQAGDDEVARVAAAA
TSFRANTLSDKQKAQLRYDASLQAVFTGRGCSYEEEQYMQYPKMAGAIRW
GTGAYAADVVGVTGTMGVKMPSVAERIAGVNRDSFFPGYKMREAVERKPK
FWEAAPTKYYGGMSGAALEWGIKDVKDKFEDGIAERWQPGWQPKPVNAGY
*
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spliced messenger RNA

>Ggra2294.t1 ID=Ggra2294.t1|Name=Ggra2294.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1053bp|location=Sequence derived from alignment at tig00000122_pilon:47703..48755- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGTCGCCCGCTTTCGCCGCGCCCATTGCCATTGGCAGCACGCCGTT
CAATGGCAAAAGCACCATCTGCGCGCGCCGCGCGATGCGCACCAACCGCG
TGTCCATGCTGGTGTCGTCGCCGGCCGACTCCTTCATGAACAAGTCGCAG
ACACGCGAAGCCAAACAGGCAGCCACCTCCACCGGCGTGTACACCCCGCA
GTGCACGGAGGCTACCGGTGGCTGTAACACGGCAGAAGCCACTCGTCTGG
CATCTCTCGCGCGCTCGTTCAGACTGCGACAGATGTCCGCCTCCTCCAAG
ATGAAGGACCTTTACGACACGCGACGCGCCGCCATCATCGCCGCCGCTGG
CTCGCACGTTGACGAGAGCTATGCGGTCAGCTTCCCTGCGAGGGCCGCTG
CTACCGTCGCCGGTCGCGCCGAGATGTTGCGCGCCTGTAGTCGCTATGTG
GTGGCCAATGAACCGGCACAGCAGTACATGTTCGAGTGTGTGGACCGCCA
GTACAAGGCTGTCAACGTTCCGGGCGCTGTTTATTCGGTGGGCGCGTACA
ATGCCAGACAGGCCGGTGACGATGAAGTGGCGCGTGTAGCGGCGGCTGCC
ACGTCGTTCAGAGCCAATACCTTGTCTGACAAGCAGAAGGCGCAGCTACG
GTACGACGCGTCGTTACAGGCTGTGTTCACTGGCAGGGGATGTTCATATG
AAGAGGAGCAATACATGCAGTACCCCAAGATGGCGGGAGCCATTCGATGG
GGTACCGGCGCGTATGCGGCCGATGTGGTGGGAGTTACTGGCACCATGGG
AGTGAAGATGCCCAGCGTGGCAGAGCGTATCGCGGGTGTTAATCGTGATA
GTTTCTTCCCGGGCTACAAGATGAGAGAGGCTGTTGAGAGGAAGCCCAAG
TTCTGGGAAGCGGCGCCTACCAAGTACTACGGTGGCATGAGCGGCGCGGC
GTTGGAGTGGGGAATCAAGGACGTCAAGGACAAGTTTGAGGATGGCATTG
CGGAACGCTGGCAGCCGGGATGGCAGCCCAAGCCGGTCAACGCCGGCTAT
TGA
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protein sequence of Ggra2294.t1

>Ggra2294.t1 ID=Ggra2294.t1|Name=Ggra2294.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=351bp
MESPAFAAPIAIGSTPFNGKSTICARRAMRTNRVSMLVSSPADSFMNKSQ
TREAKQAATSTGVYTPQCTEATGGCNTAEATRLASLARSFRLRQMSASSK
MKDLYDTRRAAIIAAAGSHVDESYAVSFPARAAATVAGRAEMLRACSRYV
VANEPAQQYMFECVDRQYKAVNVPGAVYSVGAYNARQAGDDEVARVAAAA
TSFRANTLSDKQKAQLRYDASLQAVFTGRGCSYEEEQYMQYPKMAGAIRW
GTGAYAADVVGVTGTMGVKMPSVAERIAGVNRDSFFPGYKMREAVERKPK
FWEAAPTKYYGGMSGAALEWGIKDVKDKFEDGIAERWQPGWQPKPVNAGY
*
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mRNA from alignment at tig00000122_pilon:47703..48755-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2294.t1 ID=Ggra2294.t1|Name=Ggra2294.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1053bp|location=Sequence derived from alignment at tig00000122_pilon:47703..48755- (Gracilaria gracilis GNS1m male)
ATGGAGTCGCCCGCTTTCGCCGCGCCCATTGCCATTGGCAGCACGCCGTT
CAATGGCAAAAGCACCATCTGCGCGCGCCGCGCGATGCGCACCAACCGCG
TGTCCATGCTGGTGTCGTCGCCGGCCGACTCCTTCATGAACAAGTCGCAG
ACACGCGAAGCCAAACAGGCAGCCACCTCCACCGGCGTGTACACCCCGCA
GTGCACGGAGGCTACCGGTGGCTGTAACACGGCAGAAGCCACTCGTCTGG
CATCTCTCGCGCGCTCGTTCAGACTGCGACAGATGTCCGCCTCCTCCAAG
ATGAAGGACCTTTACGACACGCGACGCGCCGCCATCATCGCCGCCGCTGG
CTCGCACGTTGACGAGAGCTATGCGGTCAGCTTCCCTGCGAGGGCCGCTG
CTACCGTCGCCGGTCGCGCCGAGATGTTGCGCGCCTGTAGTCGCTATGTG
GTGGCCAATGAACCGGCACAGCAGTACATGTTCGAGTGTGTGGACCGCCA
GTACAAGGCTGTCAACGTTCCGGGCGCTGTTTATTCGGTGGGCGCGTACA
ATGCCAGACAGGCCGGTGACGATGAAGTGGCGCGTGTAGCGGCGGCTGCC
ACGTCGTTCAGAGCCAATACCTTGTCTGACAAGCAGAAGGCGCAGCTACG
GTACGACGCGTCGTTACAGGCTGTGTTCACTGGCAGGGGATGTTCATATG
AAGAGGAGCAATACATGCAGTACCCCAAGATGGCGGGAGCCATTCGATGG
GGTACCGGCGCGTATGCGGCCGATGTGGTGGGAGTTACTGGCACCATGGG
AGTGAAGATGCCCAGCGTGGCAGAGCGTATCGCGGGTGTTAATCGTGATA
GTTTCTTCCCGGGCTACAAGATGAGAGAGGCTGTTGAGAGGAAGCCCAAG
TTCTGGGAAGCGGCGCCTACCAAGTACTACGGTGGCATGAGCGGCGCGGC
GTTGGAGTGGGGAATCAAGGACGTCAAGGACAAGTTTGAGGATGGCATTG
CGGAACGCTGGCAGCCGGGATGGCAGCCCAAGCCGGTCAACGCCGGCTAT
TGA
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Coding sequence (CDS) from alignment at tig00000122_pilon:47703..48755-

>Ggra2294.t1 ID=Ggra2294.t1|Name=Ggra2294.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1053bp|location=Sequence derived from alignment at tig00000122_pilon:47703..48755- (Gracilaria gracilis GNS1m male)
ATGGAGTCGCCCGCTTTCGCCGCGCCCATTGCCATTGGCAGCACGCCGTT
CAATGGCAAAAGCACCATCTGCGCGCGCCGCGCGATGCGCACCAACCGCG
TGTCCATGCTGGTGTCGTCGCCGGCCGACTCCTTCATGAACAAGTCGCAG
ACACGCGAAGCCAAACAGGCAGCCACCTCCACCGGCGTGTACACCCCGCA
GTGCACGGAGGCTACCGGTGGCTGTAACACGGCAGAAGCCACTCGTCTGG
CATCTCTCGCGCGCTCGTTCAGACTGCGACAGATGTCCGCCTCCTCCAAG
ATGAAGGACCTTTACGACACGCGACGCGCCGCCATCATCGCCGCCGCTGG
CTCGCACGTTGACGAGAGCTATGCGGTCAGCTTCCCTGCGAGGGCCGCTG
CTACCGTCGCCGGTCGCGCCGAGATGTTGCGCGCCTGTAGTCGCTATGTG
GTGGCCAATGAACCGGCACAGCAGTACATGTTCGAGTGTGTGGACCGCCA
GTACAAGGCTGTCAACGTTCCGGGCGCTGTTTATTCGGTGGGCGCGTACA
ATGCCAGACAGGCCGGTGACGATGAAGTGGCGCGTGTAGCGGCGGCTGCC
ACGTCGTTCAGAGCCAATACCTTGTCTGACAAGCAGAAGGCGCAGCTACG
GTACGACGCGTCGTTACAGGCTGTGTTCACTGGCAGGGGATGTTCATATG
AAGAGGAGCAATACATGCAGTACCCCAAGATGGCGGGAGCCATTCGATGG
GGTACCGGCGCGTATGCGGCCGATGTGGTGGGAGTTACTGGCACCATGGG
AGTGAAGATGCCCAGCGTGGCAGAGCGTATCGCGGGTGTTAATCGTGATA
GTTTCTTCCCGGGCTACAAGATGAGAGAGGCTGTTGAGAGGAAGCCCAAG
TTCTGGGAAGCGGCGCCTACCAAGTACTACGGTGGCATGAGCGGCGCGGC
GTTGGAGTGGGGAATCAAGGACGTCAAGGACAAGTTTGAGGATGGCATTG
CGGAACGCTGGCAGCCGGGATGGCAGCCCAAGCCGGTCAACGCCGGCTAT
TGA
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