Ggra2233.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2233.t1
Unique NameGgra2233.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length87
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:796372..796632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2233Ggra2233Gracilaria gracilis GNS1m malegenetig00000900_pilon 796372..796632 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2233.t1.stop1Ggra2233.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 796372..796374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2233.t1.CDS1Ggra2233.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 796372..796632 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2233.t1.exon1Ggra2233.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 796372..796632 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2233.t1.start1Ggra2233.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 796630..796632 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2233.t1Ggra2233.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 796372..796632 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2233.t1 ID=Ggra2233.t1|Name=Ggra2233.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=87bp
MESQPMLELDDFSFALDVRHGPAASLQMQIGLEDVASIMDDTDQSALFSP
YGGASCGAFSALDTRFGPLDLDNLQAFGVSAQVEGL*
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spliced messenger RNA

>Ggra2233.t1 ID=Ggra2233.t1|Name=Ggra2233.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=261bp|location=Sequence derived from alignment at tig00000900_pilon:796372..796632- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGTCGCAGCCGATGCTGGAACTGGACGACTTTTCGTTCGCGCTGGA
CGTGAGGCACGGCCCGGCGGCGTCGCTACAGATGCAGATCGGGCTGGAGG
ACGTGGCCAGCATCATGGACGACACGGACCAGTCGGCGCTCTTCTCGCCG
TACGGCGGCGCGTCGTGCGGCGCGTTCTCGGCGCTTGACACGCGCTTCGG
TCCGCTGGACCTGGACAACCTGCAGGCGTTTGGCGTGAGCGCGCAGGTGG
AGGGTCTGTGA
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protein sequence of Ggra2233.t1

>Ggra2233.t1 ID=Ggra2233.t1|Name=Ggra2233.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=87bp
MESQPMLELDDFSFALDVRHGPAASLQMQIGLEDVASIMDDTDQSALFSP
YGGASCGAFSALDTRFGPLDLDNLQAFGVSAQVEGL*
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mRNA from alignment at tig00000900_pilon:796372..796632-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2233.t1 ID=Ggra2233.t1|Name=Ggra2233.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=261bp|location=Sequence derived from alignment at tig00000900_pilon:796372..796632- (Gracilaria gracilis GNS1m male)
ATGGAGTCGCAGCCGATGCTGGAACTGGACGACTTTTCGTTCGCGCTGGA
CGTGAGGCACGGCCCGGCGGCGTCGCTACAGATGCAGATCGGGCTGGAGG
ACGTGGCCAGCATCATGGACGACACGGACCAGTCGGCGCTCTTCTCGCCG
TACGGCGGCGCGTCGTGCGGCGCGTTCTCGGCGCTTGACACGCGCTTCGG
TCCGCTGGACCTGGACAACCTGCAGGCGTTTGGCGTGAGCGCGCAGGTGG
AGGGTCTGTGA
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Coding sequence (CDS) from alignment at tig00000900_pilon:796372..796632-

>Ggra2233.t1 ID=Ggra2233.t1|Name=Ggra2233.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=261bp|location=Sequence derived from alignment at tig00000900_pilon:796372..796632- (Gracilaria gracilis GNS1m male)
ATGGAGTCGCAGCCGATGCTGGAACTGGACGACTTTTCGTTCGCGCTGGA
CGTGAGGCACGGCCCGGCGGCGTCGCTACAGATGCAGATCGGGCTGGAGG
ACGTGGCCAGCATCATGGACGACACGGACCAGTCGGCGCTCTTCTCGCCG
TACGGCGGCGCGTCGTGCGGCGCGTTCTCGGCGCTTGACACGCGCTTCGG
TCCGCTGGACCTGGACAACCTGCAGGCGTTTGGCGTGAGCGCGCAGGTGG
AGGGTCTGTGA
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