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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1866.t2.start1 | Ggra1866.t2.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000907_pilon 41589..41591 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1866.t2 ID=Ggra1866.t2|Name=Ggra1866.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=918bp MHDNDPDAHNSTTEKLARMLPSEELLHQHRFLIPDAEARSQVSLMEHTIR MFLRKDRYSELLDTAACYQSHEVTDRILHNVAQLRNEIRAMRQENNVSRY IPHCLNTDGAQALRCEPHIRILGLDSNHERVSKPIHQLDQRLGAIPCWGT SPQSPPLFANEHNLSTRFRILMDVATAFTVAHQAGWYHGRLCPDMIRIMQ LRTPQKTTSTESIESFPSAIVLHFADRQNGIGCRACEYCCSREKEVKRTN HRESSNLNSMDFSFRHRPQSELISILPEAEDRYIFGNLVCWLYSAQCFDY NEPNCQHNYDLLQHVPWPLRMIVTDAPDLEMPAIQLWLDQLDKKHIDPFS DQPLCTIPSRHSSILSSSPNRVNDFNEADEAAKSKEEAIFECSIRAATAA AKGEEPLAVLHLGLLFELRFRNLSQKFAMQAPMAAKALRDAYDYYAVAAE LQNTSALHHIARLLYQAWYDRKATLPALSQSQILSLLLESAIRQNFGAYR ALETVCEHGIRVAMETSSPDKNIKRLGSVSHEGSSSVVDSDLMNVMYRMG LVLRRGDNDIHIDDKLAVGCFFIARNLGHLGASLELGLFLVERAVSLDEV RQGIDMLQTLANWPLGGNTGSVESLEACFRLGRWCLLGLPHDFGRPDMKN KLMAIRYLKPAAEQNHKEAMVQYGMLHERKIIPNGNTEGHDALEWISKAG DCPSAFSALATLEWRKAVRNWNLQTRRALNTSFGSGSAPSGDDATTGETQ QARRRKPPFFRKRGPGSKGSDQRSQSSSSSGSLTDSSSHDEALPELRRQT ARILRTAEKMFQRSQQPNDLYPEKQYDPLPLYKLGYFYNNVKDIWGICDP NVRAADLEQKARSLLSKAIERTSSSYEGIKWKRNRRNWILEDQAVVREAE SLFQKLVEPVKLSGRGH* back to topspliced messenger RNA >Ggra1866.t2 ID=Ggra1866.t2|Name=Ggra1866.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2754bp|location=Sequence derived from alignment at tig00000907_pilon:38838..41591- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCACGACAACGATCCCGATGCTCACAACTCAACAACTGAAAAGCTTGC TCGCATGCTTCCTTCGGAGGAGTTGCTTCACCAGCACAGATTTCTCATTC CCGACGCCGAAGCTCGGAGCCAAGTGTCGCTCATGGAGCACACTATCCGC ATGTTCCTCCGCAAGGATCGTTACTCGGAGCTTCTTGACACCGCAGCGTG TTATCAAAGTCACGAAGTCACTGACCGAATTCTTCATAATGTCGCCCAAC TTCGAAACGAAATTCGTGCCATGAGGCAAGAGAACAATGTTTCCAGGTAC ATCCCACACTGTCTCAACACTGACGGCGCCCAGGCATTGCGTTGTGAGCC TCACATTCGAATTCTTGGACTTGACTCAAATCATGAACGAGTGTCTAAAC CAATTCATCAGCTTGATCAACGCCTCGGTGCAATTCCCTGTTGGGGAACT TCTCCCCAGTCCCCACCGTTGTTCGCGAATGAACACAACCTATCCACGCG ATTTCGCATCCTGATGGACGTTGCCACAGCCTTCACTGTCGCACATCAGG CTGGGTGGTATCACGGCCGTCTTTGCCCCGACATGATACGAATCATGCAA CTCAGAACACCACAAAAGACTACATCCACTGAGTCAATTGAAAGCTTTCC AAGTGCGATTGTCCTGCACTTTGCTGACCGTCAGAACGGAATTGGCTGTC GTGCATGTGAGTACTGTTGCTCAAGAGAGAAAGAGGTCAAACGCACAAAT CACCGAGAATCGTCGAATCTAAACAGTATGGACTTCTCGTTTAGACATCG CCCACAATCGGAACTGATTTCTATACTACCTGAAGCTGAAGATCGATACA TTTTCGGCAACCTGGTCTGCTGGCTCTACTCAGCACAATGTTTTGATTAC AACGAACCAAACTGTCAACACAATTATGATCTCCTACAACACGTTCCATG GCCTTTGCGAATGATTGTCACTGACGCTCCCGATTTAGAGATGCCCGCAA TCCAGCTATGGTTAGATCAACTTGACAAAAAGCACATCGATCCATTCTCC GACCAACCTCTTTGCACCATACCTTCGCGACATAGTTCAATACTTTCATC TTCCCCAAACAGAGTAAATGATTTCAACGAGGCCGATGAGGCTGCGAAGT CAAAGGAAGAAGCGATTTTCGAGTGTTCCATACGAGCTGCCACTGCCGCT GCCAAGGGTGAAGAGCCGCTGGCCGTTCTTCATCTTGGACTTCTCTTTGA ACTGCGATTCCGAAATCTCTCGCAAAAGTTTGCAATGCAAGCACCGATGG CGGCTAAAGCCCTTCGAGATGCTTACGACTACTACGCTGTTGCAGCCGAG TTGCAAAATACATCGGCCCTTCATCATATTGCTCGCCTGCTGTATCAAGC CTGGTACGACCGAAAGGCCACTCTCCCTGCACTTTCACAATCTCAAATAT TGTCGCTGCTGCTGGAAAGTGCAATACGTCAGAACTTCGGTGCATATCGA GCCCTTGAAACTGTGTGCGAACATGGGATACGCGTTGCCATGGAAACATC TTCTCCAGACAAGAACATCAAGAGACTAGGCTCTGTGTCGCACGAAGGTA GCTCGTCCGTTGTGGATTCGGATCTCATGAATGTGATGTACCGAATGGGG CTAGTACTGAGGCGAGGAGATAATGACATTCACATCGATGACAAGTTAGC CGTCGGTTGTTTTTTCATCGCACGCAACCTCGGGCACCTCGGCGCGTCGC TGGAACTCGGACTTTTCCTAGTAGAGAGGGCAGTCTCTCTGGACGAAGTG AGACAAGGTATCGATATGCTGCAAACGTTGGCGAATTGGCCTCTTGGTGG GAACACTGGGTCCGTGGAAAGCTTGGAAGCTTGTTTCCGTCTTGGTCGTT GGTGCCTTCTCGGACTTCCTCATGATTTTGGGCGACCTGACATGAAAAAC AAGCTGATGGCCATCAGATACCTCAAACCAGCTGCGGAACAGAATCACAA AGAAGCAATGGTTCAATATGGTATGCTGCATGAAAGGAAGATCATTCCAA ACGGAAATACAGAGGGACATGACGCTCTTGAGTGGATCTCGAAGGCCGGC GACTGTCCAAGCGCCTTCAGCGCGCTGGCGACATTGGAGTGGCGGAAGGC CGTACGCAATTGGAATCTCCAGACGCGCAGGGCTTTGAACACGTCTTTTG GCTCTGGCTCTGCTCCTTCTGGCGACGATGCAACAACTGGGGAAACACAG CAGGCACGGAGACGGAAACCACCATTTTTCAGAAAGCGGGGTCCGGGTTC AAAAGGAAGCGATCAGCGGAGTCAATCGAGTTCCAGTAGTGGTTCTTTGA CGGATTCAAGTAGCCATGATGAGGCTCTTCCGGAATTGAGAAGACAAACT GCACGCATCCTCCGAACAGCAGAGAAGATGTTCCAACGGTCCCAGCAACC GAATGATCTGTACCCTGAAAAACAATACGACCCGTTGCCTTTGTACAAAC TCGGTTACTTTTACAATAACGTGAAGGACATTTGGGGAATATGTGATCCG AATGTGCGAGCAGCTGATTTAGAGCAGAAGGCAAGAAGTCTACTCAGTAA AGCCATCGAAAGGACGTCGTCGAGTTATGAGGGTATAAAATGGAAAAGAA ATAGGAGGAACTGGATACTGGAGGATCAAGCTGTCGTACGGGAAGCTGAA AGCTTGTTTCAAAAACTGGTTGAACCCGTAAAACTATCGGGGAGAGGTCA CTGA back to topprotein sequence of Ggra1866.t2 >Ggra1866.t2 ID=Ggra1866.t2|Name=Ggra1866.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=918bp
MHDNDPDAHNSTTEKLARMLPSEELLHQHRFLIPDAEARSQVSLMEHTIR MFLRKDRYSELLDTAACYQSHEVTDRILHNVAQLRNEIRAMRQENNVSRY IPHCLNTDGAQALRCEPHIRILGLDSNHERVSKPIHQLDQRLGAIPCWGT SPQSPPLFANEHNLSTRFRILMDVATAFTVAHQAGWYHGRLCPDMIRIMQ LRTPQKTTSTESIESFPSAIVLHFADRQNGIGCRACEYCCSREKEVKRTN HRESSNLNSMDFSFRHRPQSELISILPEAEDRYIFGNLVCWLYSAQCFDY NEPNCQHNYDLLQHVPWPLRMIVTDAPDLEMPAIQLWLDQLDKKHIDPFS DQPLCTIPSRHSSILSSSPNRVNDFNEADEAAKSKEEAIFECSIRAATAA AKGEEPLAVLHLGLLFELRFRNLSQKFAMQAPMAAKALRDAYDYYAVAAE LQNTSALHHIARLLYQAWYDRKATLPALSQSQILSLLLESAIRQNFGAYR ALETVCEHGIRVAMETSSPDKNIKRLGSVSHEGSSSVVDSDLMNVMYRMG LVLRRGDNDIHIDDKLAVGCFFIARNLGHLGASLELGLFLVERAVSLDEV RQGIDMLQTLANWPLGGNTGSVESLEACFRLGRWCLLGLPHDFGRPDMKN KLMAIRYLKPAAEQNHKEAMVQYGMLHERKIIPNGNTEGHDALEWISKAG DCPSAFSALATLEWRKAVRNWNLQTRRALNTSFGSGSAPSGDDATTGETQ QARRRKPPFFRKRGPGSKGSDQRSQSSSSSGSLTDSSSHDEALPELRRQT ARILRTAEKMFQRSQQPNDLYPEKQYDPLPLYKLGYFYNNVKDIWGICDP NVRAADLEQKARSLLSKAIERTSSSYEGIKWKRNRRNWILEDQAVVREAE SLFQKLVEPVKLSGRGH* back to topmRNA from alignment at tig00000907_pilon:38838..41591- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1866.t2 ID=Ggra1866.t2|Name=Ggra1866.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2754bp|location=Sequence derived from alignment at tig00000907_pilon:38838..41591- (Gracilaria gracilis GNS1m male) ATGCACGACAACGATCCCGATGCTCACAACTCAACAACTGAAAAGCTTGC
TCGCATGCTTCCTTCGGAGGAGTTGCTTCACCAGCACAGATTTCTCATTC
CCGACGCCGAAGCTCGGAGCCAAGTGTCGCTCATGGAGCACACTATCCGC
ATGTTCCTCCGCAAGGATCGTTACTCGGAGCTTCTTGACACCGCAGCGTG
TTATCAAAGTCACGAAGTCACTGACCGAATTCTTCATAATGTCGCCCAAC
TTCGAAACGAAATTCGTGCCATGAGGCAAGAGAACAATGTTTCCAGGTAC
ATCCCACACTGTCTCAACACTGACGGCGCCCAGGCATTGCGTTGTGAGCC
TCACATTCGAATTCTTGGACTTGACTCAAATCATGAACGAGTGTCTAAAC
CAATTCATCAGCTTGATCAACGCCTCGGTGCAATTCCCTGTTGGGGAACT
TCTCCCCAGTCCCCACCGTTGTTCGCGAATGAACACAACCTATCCACGCG
ATTTCGCATCCTGATGGACGTTGCCACAGCCTTCACTGTCGCACATCAGG
CTGGGTGGTATCACGGCCGTCTTTGCCCCGACATGATACGAATCATGCAA
CTCAGAACACCACAAAAGACTACATCCACTGAGTCAATTGAAAGCTTTCC
AAGTGCGATTGTCCTGCACTTTGCTGACCGTCAGAACGGAATTGGCTGTC
GTGCATGTGAGTACTGTTGCTCAAGAGAGAAAGAGGTCAAACGCACAAAT
CACCGAGAATCGTCGAATCTAAACAGTATGGACTTCTCGTTTAGACATCG
CCCACAATCGGAACTGATTTCTATACTACCTGAAGCTGAAGATCGATACA
TTTTCGGCAACCTGGTCTGCTGGCTCTACTCAGCACAATGTTTTGATTAC
AACGAACCAAACTGTCAACACAATTATGATCTCCTACAACACGTTCCATG
GCCTTTGCGAATGATTGTCACTGACGCTCCCGATTTAGAGATGCCCGCAA
TCCAGCTATGGTTAGATCAACTTGACAAAAAGCACATCGATCCATTCTCC
GACCAACCTCTTTGCACCATACCTTCGCGACATAGTTCAATACTTTCATC
TTCCCCAAACAGAGTAAATGATTTCAACGAGGCCGATGAGGCTGCGAAGT
CAAAGGAAGAAGCGATTTTCGAGTGTTCCATACGAGCTGCCACTGCCGCT
GCCAAGGGTGAAGAGCCGCTGGCCGTTCTTCATCTTGGACTTCTCTTTGA
ACTGCGATTCCGAAATCTCTCGCAAAAGTTTGCAATGCAAGCACCGATGG
CGGCTAAAGCCCTTCGAGATGCTTACGACTACTACGCTGTTGCAGCCGAG
TTGCAAAATACATCGGCCCTTCATCATATTGCTCGCCTGCTGTATCAAGC
CTGGTACGACCGAAAGGCCACTCTCCCTGCACTTTCACAATCTCAAATAT
TGTCGCTGCTGCTGGAAAGTGCAATACGTCAGAACTTCGGTGCATATCGA
GCCCTTGAAACTGTGTGCGAACATGGGATACGCGTTGCCATGGAAACATC
TTCTCCAGACAAGAACATCAAGAGACTAGGCTCTGTGTCGCACGAAGGTA
GCTCGTCCGTTGTGGATTCGGATCTCATGAATGTGATGTACCGAATGGGG
CTAGTACTGAGGCGAGGAGATAATGACATTCACATCGATGACAAGTTAGC
CGTCGGTTGTTTTTTCATCGCACGCAACCTCGGGCACCTCGGCGCGTCGC
TGGAACTCGGACTTTTCCTAGTAGAGAGGGCAGTCTCTCTGGACGAAGTG
AGACAAGGTATCGATATGCTGCAAACGTTGGCGAATTGGCCTCTTGGTGG
GAACACTGGGTCCGTGGAAAGCTTGGAAGCTTGTTTCCGTCTTGGTCGTT
GGTGCCTTCTCGGACTTCCTCATGATTTTGGGCGACCTGACATGAAAAAC
AAGCTGATGGCCATCAGATACCTCAAACCAGCTGCGGAACAGAATCACAA
AGAAGCAATGGTTCAATATGGTATGCTGCATGAAAGGAAGATCATTCCAA
ACGGAAATACAGAGGGACATGACGCTCTTGAGTGGATCTCGAAGGCCGGC
GACTGTCCAAGCGCCTTCAGCGCGCTGGCGACATTGGAGTGGCGGAAGGC
CGTACGCAATTGGAATCTCCAGACGCGCAGGGCTTTGAACACGTCTTTTG
GCTCTGGCTCTGCTCCTTCTGGCGACGATGCAACAACTGGGGAAACACAG
CAGGCACGGAGACGGAAACCACCATTTTTCAGAAAGCGGGGTCCGGGTTC
AAAAGGAAGCGATCAGCGGAGTCAATCGAGTTCCAGTAGTGGTTCTTTGA
CGGATTCAAGTAGCCATGATGAGGCTCTTCCGGAATTGAGAAGACAAACT
GCACGCATCCTCCGAACAGCAGAGAAGATGTTCCAACGGTCCCAGCAACC
GAATGATCTGTACCCTGAAAAACAATACGACCCGTTGCCTTTGTACAAAC
TCGGTTACTTTTACAATAACGTGAAGGACATTTGGGGAATATGTGATCCG
AATGTGCGAGCAGCTGATTTAGAGCAGAAGGCAAGAAGTCTACTCAGTAA
AGCCATCGAAAGGACGTCGTCGAGTTATGAGGGTATAAAATGGAAAAGAA
ATAGGAGGAACTGGATACTGGAGGATCAAGCTGTCGTACGGGAAGCTGAA
AGCTTGTTTCAAAAACTGGTTGAACCCGTAAAACTATCGGGGAGAGGTCA
CTGA back to topCoding sequence (CDS) from alignment at tig00000907_pilon:38838..41591- >Ggra1866.t2 ID=Ggra1866.t2|Name=Ggra1866.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2754bp|location=Sequence derived from alignment at tig00000907_pilon:38838..41591- (Gracilaria gracilis GNS1m male) ATGCACGACAACGATCCCGATGCTCACAACTCAACAACTGAAAAGCTTGC TCGCATGCTTCCTTCGGAGGAGTTGCTTCACCAGCACAGATTTCTCATTC CCGACGCCGAAGCTCGGAGCCAAGTGTCGCTCATGGAGCACACTATCCGC ATGTTCCTCCGCAAGGATCGTTACTCGGAGCTTCTTGACACCGCAGCGTG TTATCAAAGTCACGAAGTCACTGACCGAATTCTTCATAATGTCGCCCAAC TTCGAAACGAAATTCGTGCCATGAGGCAAGAGAACAATGTTTCCAGGTAC ATCCCACACTGTCTCAACACTGACGGCGCCCAGGCATTGCGTTGTGAGCC TCACATTCGAATTCTTGGACTTGACTCAAATCATGAACGAGTGTCTAAAC CAATTCATCAGCTTGATCAACGCCTCGGTGCAATTCCCTGTTGGGGAACT TCTCCCCAGTCCCCACCGTTGTTCGCGAATGAACACAACCTATCCACGCG ATTTCGCATCCTGATGGACGTTGCCACAGCCTTCACTGTCGCACATCAGG CTGGGTGGTATCACGGCCGTCTTTGCCCCGACATGATACGAATCATGCAA CTCAGAACACCACAAAAGACTACATCCACTGAGTCAATTGAAAGCTTTCC AAGTGCGATTGTCCTGCACTTTGCTGACCGTCAGAACGGAATTGGCTGTC GTGCATGTGAGTACTGTTGCTCAAGAGAGAAAGAGGTCAAACGCACAAAT CACCGAGAATCGTCGAATCTAAACAGTATGGACTTCTCGTTTAGACATCG CCCACAATCGGAACTGATTTCTATACTACCTGAAGCTGAAGATCGATACA TTTTCGGCAACCTGGTCTGCTGGCTCTACTCAGCACAATGTTTTGATTAC AACGAACCAAACTGTCAACACAATTATGATCTCCTACAACACGTTCCATG GCCTTTGCGAATGATTGTCACTGACGCTCCCGATTTAGAGATGCCCGCAA TCCAGCTATGGTTAGATCAACTTGACAAAAAGCACATCGATCCATTCTCC GACCAACCTCTTTGCACCATACCTTCGCGACATAGTTCAATACTTTCATC TTCCCCAAACAGAGTAAATGATTTCAACGAGGCCGATGAGGCTGCGAAGT CAAAGGAAGAAGCGATTTTCGAGTGTTCCATACGAGCTGCCACTGCCGCT GCCAAGGGTGAAGAGCCGCTGGCCGTTCTTCATCTTGGACTTCTCTTTGA ACTGCGATTCCGAAATCTCTCGCAAAAGTTTGCAATGCAAGCACCGATGG CGGCTAAAGCCCTTCGAGATGCTTACGACTACTACGCTGTTGCAGCCGAG TTGCAAAATACATCGGCCCTTCATCATATTGCTCGCCTGCTGTATCAAGC CTGGTACGACCGAAAGGCCACTCTCCCTGCACTTTCACAATCTCAAATAT TGTCGCTGCTGCTGGAAAGTGCAATACGTCAGAACTTCGGTGCATATCGA GCCCTTGAAACTGTGTGCGAACATGGGATACGCGTTGCCATGGAAACATC TTCTCCAGACAAGAACATCAAGAGACTAGGCTCTGTGTCGCACGAAGGTA GCTCGTCCGTTGTGGATTCGGATCTCATGAATGTGATGTACCGAATGGGG CTAGTACTGAGGCGAGGAGATAATGACATTCACATCGATGACAAGTTAGC CGTCGGTTGTTTTTTCATCGCACGCAACCTCGGGCACCTCGGCGCGTCGC TGGAACTCGGACTTTTCCTAGTAGAGAGGGCAGTCTCTCTGGACGAAGTG AGACAAGGTATCGATATGCTGCAAACGTTGGCGAATTGGCCTCTTGGTGG GAACACTGGGTCCGTGGAAAGCTTGGAAGCTTGTTTCCGTCTTGGTCGTT GGTGCCTTCTCGGACTTCCTCATGATTTTGGGCGACCTGACATGAAAAAC AAGCTGATGGCCATCAGATACCTCAAACCAGCTGCGGAACAGAATCACAA AGAAGCAATGGTTCAATATGGTATGCTGCATGAAAGGAAGATCATTCCAA ACGGAAATACAGAGGGACATGACGCTCTTGAGTGGATCTCGAAGGCCGGC GACTGTCCAAGCGCCTTCAGCGCGCTGGCGACATTGGAGTGGCGGAAGGC CGTACGCAATTGGAATCTCCAGACGCGCAGGGCTTTGAACACGTCTTTTG GCTCTGGCTCTGCTCCTTCTGGCGACGATGCAACAACTGGGGAAACACAG CAGGCACGGAGACGGAAACCACCATTTTTCAGAAAGCGGGGTCCGGGTTC AAAAGGAAGCGATCAGCGGAGTCAATCGAGTTCCAGTAGTGGTTCTTTGA CGGATTCAAGTAGCCATGATGAGGCTCTTCCGGAATTGAGAAGACAAACT GCACGCATCCTCCGAACAGCAGAGAAGATGTTCCAACGGTCCCAGCAACC GAATGATCTGTACCCTGAAAAACAATACGACCCGTTGCCTTTGTACAAAC TCGGTTACTTTTACAATAACGTGAAGGACATTTGGGGAATATGTGATCCG AATGTGCGAGCAGCTGATTTAGAGCAGAAGGCAAGAAGTCTACTCAGTAA AGCCATCGAAAGGACGTCGTCGAGTTATGAGGGTATAAAATGGAAAAGAA ATAGGAGGAACTGGATACTGGAGGATCAAGCTGTCGTACGGGAAGCTGAA AGCTTGTTTCAAAAACTGGTTGAACCCGTAAAACTATCGGGGAGAGGTCA CTGA back to top
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