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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2850.Phatr49215 |
| PFAMs | VWA_2 |
| Max annot lvl | 2836|Bacillariophyta |
| Evalue | 1.7e-20 |
| EggNOG OGs | KOG2353@1|root,KOG2353@2759|Eukaryota,2XEN6@2836|Bacillariophyta |
| Description | von Willebrand factor type A domain |
| COG category | PT |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1865.t2.start1 | Ggra1865.t2.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000907_pilon 35736..35738 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1865.t2 ID=Ggra1865.t2|Name=Ggra1865.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=836bp MTGFFTWASLFLLFHATISVQANNAFDKLYTEKNEAARDVAAELARVLHP SARCRASKNCNQGPCLPSDCANDAFGPNYRCSGLLLASSGESICPASCAP EKRLLNFNTAHISFTPDSVRYETRNGKHNIRVQDRDLLRDTCALKSMRDS LRKSFERHKLESWIYASTSSGLFLAYPGNARGRNTAHTEQCGFVPMIRPW YVAAASGLKDVVFLLDQTSLVAADKVLTRSLESAINALEQSDYVAVLAVG KELKTLGGVQRLQKATGDVKERLLLDLSRLQPSGGSPAIETAFSKAFDLL QLSAADGQTSFCSKIIVLLIGNEPECFEQCGPSRSVACSCTSTIVDIVKR KQESIGGGVSIVTFTEGDNNDAQRIARSLVCETSNPGVWSRVSSEQDHET SLLAYTDIASLTQTRAQYTSDVYIDQNGLGEMFTIAHPVYDPDSRRLVGA VGVDTTIGEVAKAVGDRNTAKQGVKNRWENEKRGCKARELKGCELQKLRR RYGGMCADVLVRNGNPWTCFRAGSSLFWRSEAEQTWTDARSSCRSAASDL AVINNSGKNQVAASISSLDGSWIGLRASRGNSLQWVNGSPLVETNLGFSS NTSASFEKQIKTLHNVNLVDACVSTDRRGVEDNWNVVPCDAKRSAICEMP FDSPNASQQCPTEATFDPRMIPEYKPFNKVDCDFSDPSCPVEEDEALKSA NPICSDKSLAPRSDFDRRCCGGRSDSSGETSCGSDGLSVGLIAGVVIAAV FLLVAFILIVLWVRKRRRKIASRKALPETGGDTSSAGNQTSSPQNPSALH APVDDRKPLDAVDYLAMVKDSEGYKEPDLEILDMN* back to topspliced messenger RNA >Ggra1865.t2 ID=Ggra1865.t2|Name=Ggra1865.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2508bp|location=Sequence derived from alignment at tig00000907_pilon:35736..38243+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACAGGCTTCTTCACATGGGCCTCGTTATTCCTTCTCTTCCATGCCAC GATATCTGTTCAGGCCAATAACGCTTTCGATAAACTTTACACAGAGAAGA ATGAAGCTGCACGCGATGTAGCAGCTGAACTGGCAAGGGTCTTACATCCC TCCGCACGATGTCGAGCCTCCAAGAACTGTAACCAAGGGCCTTGTCTTCC AAGCGACTGCGCCAACGATGCGTTCGGACCTAACTATCGCTGTTCCGGCT TGCTGTTGGCTTCCAGTGGAGAATCAATCTGCCCTGCCAGTTGCGCGCCT GAGAAAAGACTGCTGAATTTCAACACTGCTCACATCAGCTTTACACCTGA TTCGGTACGATACGAGACACGCAACGGCAAACACAACATTCGAGTACAGG ATCGTGATCTACTTAGAGATACCTGTGCTCTTAAATCTATGCGCGACTCT TTGCGCAAATCATTTGAGAGGCACAAGCTCGAGAGTTGGATTTATGCGTC CACTTCTTCAGGACTATTCCTCGCCTACCCAGGGAATGCAAGAGGACGCA ATACGGCCCATACTGAACAATGCGGATTTGTTCCGATGATTCGTCCCTGG TATGTCGCCGCCGCCTCCGGCTTGAAAGATGTCGTGTTTCTGTTGGACCA GACTTCTTTGGTAGCGGCGGATAAAGTGCTCACTAGATCTCTGGAAAGTG CAATAAATGCTCTGGAACAGAGTGATTACGTCGCTGTACTGGCAGTAGGC AAAGAACTGAAGACCCTGGGTGGCGTCCAGAGGCTCCAGAAAGCGACAGG CGACGTCAAGGAAAGGCTTTTATTGGATTTAAGTCGGTTACAACCATCAG GTGGATCGCCTGCTATAGAGACTGCATTTTCGAAAGCCTTTGATCTGCTT CAACTGTCAGCAGCTGACGGACAAACCAGTTTTTGCTCCAAGATCATTGT GTTGTTGATAGGCAATGAGCCGGAATGTTTCGAGCAGTGCGGACCATCTC GATCTGTGGCGTGCAGTTGTACAAGTACAATAGTGGATATCGTCAAACGC AAACAGGAAAGCATTGGAGGCGGTGTTTCCATTGTTACATTCACAGAAGG AGATAACAACGACGCCCAACGTATTGCCCGGTCTCTGGTGTGTGAGACAT CAAATCCTGGGGTCTGGAGTCGTGTATCGTCCGAGCAGGATCACGAAACA TCTCTACTTGCATACACGGATATTGCGTCTCTCACTCAAACGAGGGCACA ATACACTTCCGATGTATACATTGACCAAAATGGATTAGGTGAAATGTTTA CAATAGCACACCCTGTCTATGATCCGGACTCGAGACGCCTGGTCGGGGCT GTAGGAGTTGATACCACGATTGGCGAGGTCGCCAAAGCTGTAGGGGATAG AAATACAGCTAAACAAGGCGTCAAGAACAGATGGGAGAACGAGAAAAGGG GTTGCAAGGCCAGAGAGTTGAAGGGTTGTGAACTGCAGAAACTCCGACGG CGTTACGGCGGTATGTGCGCAGACGTCTTGGTTAGAAATGGAAATCCTTG GACGTGCTTCCGAGCAGGAAGTTCACTTTTTTGGAGGTCCGAAGCAGAGC AGACATGGACTGATGCTCGAAGCTCCTGTAGATCCGCAGCCAGTGATCTG GCAGTTATTAACAACTCAGGAAAGAATCAAGTTGCTGCGAGCATTAGCTC CCTCGACGGAAGTTGGATTGGATTGCGTGCTTCTCGAGGGAATTCTCTAC AGTGGGTGAACGGCTCGCCGTTGGTGGAAACCAATCTAGGGTTCAGCAGC AATACGAGTGCATCGTTTGAGAAACAGATCAAAACGCTTCACAATGTAAA TCTTGTAGACGCGTGCGTTTCGACCGACCGAAGGGGGGTTGAGGACAATT GGAACGTAGTGCCATGTGACGCCAAGCGATCCGCCATATGTGAGATGCCA TTTGACAGTCCAAATGCAAGTCAGCAATGTCCAACTGAAGCTACTTTCGA CCCACGGATGATACCTGAATATAAACCATTCAACAAGGTTGACTGCGATT TCTCAGATCCATCGTGCCCTGTGGAGGAAGATGAGGCTCTCAAGAGCGCG AACCCGATCTGTTCAGATAAGTCACTCGCCCCCAGAAGCGACTTCGATCG ACGGTGCTGTGGAGGAAGATCAGATTCTAGTGGCGAAACCTCATGCGGAA GCGATGGGTTATCTGTTGGCTTAATTGCGGGAGTCGTCATCGCGGCTGTT TTTCTCTTAGTGGCCTTCATACTAATCGTTCTATGGGTGAGGAAGAGGAG GAGGAAAATTGCGTCAAGAAAGGCCCTGCCGGAAACAGGGGGTGATACAA GCAGTGCAGGTAATCAGACATCTTCACCGCAAAACCCCTCTGCATTACAT GCCCCTGTGGACGACCGCAAACCTCTTGACGCTGTGGATTACCTGGCGAT GGTCAAAGACAGTGAAGGCTACAAGGAACCAGACCTAGAGATACTGGATA TGAATTGA back to topprotein sequence of Ggra1865.t2 >Ggra1865.t2 ID=Ggra1865.t2|Name=Ggra1865.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=836bp
MTGFFTWASLFLLFHATISVQANNAFDKLYTEKNEAARDVAAELARVLHP SARCRASKNCNQGPCLPSDCANDAFGPNYRCSGLLLASSGESICPASCAP EKRLLNFNTAHISFTPDSVRYETRNGKHNIRVQDRDLLRDTCALKSMRDS LRKSFERHKLESWIYASTSSGLFLAYPGNARGRNTAHTEQCGFVPMIRPW YVAAASGLKDVVFLLDQTSLVAADKVLTRSLESAINALEQSDYVAVLAVG KELKTLGGVQRLQKATGDVKERLLLDLSRLQPSGGSPAIETAFSKAFDLL QLSAADGQTSFCSKIIVLLIGNEPECFEQCGPSRSVACSCTSTIVDIVKR KQESIGGGVSIVTFTEGDNNDAQRIARSLVCETSNPGVWSRVSSEQDHET SLLAYTDIASLTQTRAQYTSDVYIDQNGLGEMFTIAHPVYDPDSRRLVGA VGVDTTIGEVAKAVGDRNTAKQGVKNRWENEKRGCKARELKGCELQKLRR RYGGMCADVLVRNGNPWTCFRAGSSLFWRSEAEQTWTDARSSCRSAASDL AVINNSGKNQVAASISSLDGSWIGLRASRGNSLQWVNGSPLVETNLGFSS NTSASFEKQIKTLHNVNLVDACVSTDRRGVEDNWNVVPCDAKRSAICEMP FDSPNASQQCPTEATFDPRMIPEYKPFNKVDCDFSDPSCPVEEDEALKSA NPICSDKSLAPRSDFDRRCCGGRSDSSGETSCGSDGLSVGLIAGVVIAAV FLLVAFILIVLWVRKRRRKIASRKALPETGGDTSSAGNQTSSPQNPSALH APVDDRKPLDAVDYLAMVKDSEGYKEPDLEILDMN* back to topmRNA from alignment at tig00000907_pilon:35736..38243+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1865.t2 ID=Ggra1865.t2|Name=Ggra1865.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2508bp|location=Sequence derived from alignment at tig00000907_pilon:35736..38243+ (Gracilaria gracilis GNS1m male) ATGACAGGCTTCTTCACATGGGCCTCGTTATTCCTTCTCTTCCATGCCAC
GATATCTGTTCAGGCCAATAACGCTTTCGATAAACTTTACACAGAGAAGA
ATGAAGCTGCACGCGATGTAGCAGCTGAACTGGCAAGGGTCTTACATCCC
TCCGCACGATGTCGAGCCTCCAAGAACTGTAACCAAGGGCCTTGTCTTCC
AAGCGACTGCGCCAACGATGCGTTCGGACCTAACTATCGCTGTTCCGGCT
TGCTGTTGGCTTCCAGTGGAGAATCAATCTGCCCTGCCAGTTGCGCGCCT
GAGAAAAGACTGCTGAATTTCAACACTGCTCACATCAGCTTTACACCTGA
TTCGGTACGATACGAGACACGCAACGGCAAACACAACATTCGAGTACAGG
ATCGTGATCTACTTAGAGATACCTGTGCTCTTAAATCTATGCGCGACTCT
TTGCGCAAATCATTTGAGAGGCACAAGCTCGAGAGTTGGATTTATGCGTC
CACTTCTTCAGGACTATTCCTCGCCTACCCAGGGAATGCAAGAGGACGCA
ATACGGCCCATACTGAACAATGCGGATTTGTTCCGATGATTCGTCCCTGG
TATGTCGCCGCCGCCTCCGGCTTGAAAGATGTCGTGTTTCTGTTGGACCA
GACTTCTTTGGTAGCGGCGGATAAAGTGCTCACTAGATCTCTGGAAAGTG
CAATAAATGCTCTGGAACAGAGTGATTACGTCGCTGTACTGGCAGTAGGC
AAAGAACTGAAGACCCTGGGTGGCGTCCAGAGGCTCCAGAAAGCGACAGG
CGACGTCAAGGAAAGGCTTTTATTGGATTTAAGTCGGTTACAACCATCAG
GTGGATCGCCTGCTATAGAGACTGCATTTTCGAAAGCCTTTGATCTGCTT
CAACTGTCAGCAGCTGACGGACAAACCAGTTTTTGCTCCAAGATCATTGT
GTTGTTGATAGGCAATGAGCCGGAATGTTTCGAGCAGTGCGGACCATCTC
GATCTGTGGCGTGCAGTTGTACAAGTACAATAGTGGATATCGTCAAACGC
AAACAGGAAAGCATTGGAGGCGGTGTTTCCATTGTTACATTCACAGAAGG
AGATAACAACGACGCCCAACGTATTGCCCGGTCTCTGGTGTGTGAGACAT
CAAATCCTGGGGTCTGGAGTCGTGTATCGTCCGAGCAGGATCACGAAACA
TCTCTACTTGCATACACGGATATTGCGTCTCTCACTCAAACGAGGGCACA
ATACACTTCCGATGTATACATTGACCAAAATGGATTAGGTGAAATGTTTA
CAATAGCACACCCTGTCTATGATCCGGACTCGAGACGCCTGGTCGGGGCT
GTAGGAGTTGATACCACGATTGGCGAGGTCGCCAAAGCTGTAGGGGATAG
AAATACAGCTAAACAAGGCGTCAAGAACAGATGGGAGAACGAGAAAAGGG
GTTGCAAGGCCAGAGAGTTGAAGGGTTGTGAACTGCAGAAACTCCGACGG
CGTTACGGCGGTATGTGCGCAGACGTCTTGGTTAGAAATGGAAATCCTTG
GACGTGCTTCCGAGCAGGAAGTTCACTTTTTTGGAGGTCCGAAGCAGAGC
AGACATGGACTGATGCTCGAAGCTCCTGTAGATCCGCAGCCAGTGATCTG
GCAGTTATTAACAACTCAGGAAAGAATCAAGTTGCTGCGAGCATTAGCTC
CCTCGACGGAAGTTGGATTGGATTGCGTGCTTCTCGAGGGAATTCTCTAC
AGTGGGTGAACGGCTCGCCGTTGGTGGAAACCAATCTAGGGTTCAGCAGC
AATACGAGTGCATCGTTTGAGAAACAGATCAAAACGCTTCACAATGTAAA
TCTTGTAGACGCGTGCGTTTCGACCGACCGAAGGGGGGTTGAGGACAATT
GGAACGTAGTGCCATGTGACGCCAAGCGATCCGCCATATGTGAGATGCCA
TTTGACAGTCCAAATGCAAGTCAGCAATGTCCAACTGAAGCTACTTTCGA
CCCACGGATGATACCTGAATATAAACCATTCAACAAGGTTGACTGCGATT
TCTCAGATCCATCGTGCCCTGTGGAGGAAGATGAGGCTCTCAAGAGCGCG
AACCCGATCTGTTCAGATAAGTCACTCGCCCCCAGAAGCGACTTCGATCG
ACGGTGCTGTGGAGGAAGATCAGATTCTAGTGGCGAAACCTCATGCGGAA
GCGATGGGTTATCTGTTGGCTTAATTGCGGGAGTCGTCATCGCGGCTGTT
TTTCTCTTAGTGGCCTTCATACTAATCGTTCTATGGGTGAGGAAGAGGAG
GAGGAAAATTGCGTCAAGAAAGGCCCTGCCGGAAACAGGGGGTGATACAA
GCAGTGCAGGTAATCAGACATCTTCACCGCAAAACCCCTCTGCATTACAT
GCCCCTGTGGACGACCGCAAACCTCTTGACGCTGTGGATTACCTGGCGAT
GGTCAAAGACAGTGAAGGCTACAAGGAACCAGACCTAGAGATACTGGATA
TGAATTGA back to topCoding sequence (CDS) from alignment at tig00000907_pilon:35736..38243+ >Ggra1865.t2 ID=Ggra1865.t2|Name=Ggra1865.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2508bp|location=Sequence derived from alignment at tig00000907_pilon:35736..38243+ (Gracilaria gracilis GNS1m male) ATGACAGGCTTCTTCACATGGGCCTCGTTATTCCTTCTCTTCCATGCCAC GATATCTGTTCAGGCCAATAACGCTTTCGATAAACTTTACACAGAGAAGA ATGAAGCTGCACGCGATGTAGCAGCTGAACTGGCAAGGGTCTTACATCCC TCCGCACGATGTCGAGCCTCCAAGAACTGTAACCAAGGGCCTTGTCTTCC AAGCGACTGCGCCAACGATGCGTTCGGACCTAACTATCGCTGTTCCGGCT TGCTGTTGGCTTCCAGTGGAGAATCAATCTGCCCTGCCAGTTGCGCGCCT GAGAAAAGACTGCTGAATTTCAACACTGCTCACATCAGCTTTACACCTGA TTCGGTACGATACGAGACACGCAACGGCAAACACAACATTCGAGTACAGG ATCGTGATCTACTTAGAGATACCTGTGCTCTTAAATCTATGCGCGACTCT TTGCGCAAATCATTTGAGAGGCACAAGCTCGAGAGTTGGATTTATGCGTC CACTTCTTCAGGACTATTCCTCGCCTACCCAGGGAATGCAAGAGGACGCA ATACGGCCCATACTGAACAATGCGGATTTGTTCCGATGATTCGTCCCTGG TATGTCGCCGCCGCCTCCGGCTTGAAAGATGTCGTGTTTCTGTTGGACCA GACTTCTTTGGTAGCGGCGGATAAAGTGCTCACTAGATCTCTGGAAAGTG CAATAAATGCTCTGGAACAGAGTGATTACGTCGCTGTACTGGCAGTAGGC AAAGAACTGAAGACCCTGGGTGGCGTCCAGAGGCTCCAGAAAGCGACAGG CGACGTCAAGGAAAGGCTTTTATTGGATTTAAGTCGGTTACAACCATCAG GTGGATCGCCTGCTATAGAGACTGCATTTTCGAAAGCCTTTGATCTGCTT CAACTGTCAGCAGCTGACGGACAAACCAGTTTTTGCTCCAAGATCATTGT GTTGTTGATAGGCAATGAGCCGGAATGTTTCGAGCAGTGCGGACCATCTC GATCTGTGGCGTGCAGTTGTACAAGTACAATAGTGGATATCGTCAAACGC AAACAGGAAAGCATTGGAGGCGGTGTTTCCATTGTTACATTCACAGAAGG AGATAACAACGACGCCCAACGTATTGCCCGGTCTCTGGTGTGTGAGACAT CAAATCCTGGGGTCTGGAGTCGTGTATCGTCCGAGCAGGATCACGAAACA TCTCTACTTGCATACACGGATATTGCGTCTCTCACTCAAACGAGGGCACA ATACACTTCCGATGTATACATTGACCAAAATGGATTAGGTGAAATGTTTA CAATAGCACACCCTGTCTATGATCCGGACTCGAGACGCCTGGTCGGGGCT GTAGGAGTTGATACCACGATTGGCGAGGTCGCCAAAGCTGTAGGGGATAG AAATACAGCTAAACAAGGCGTCAAGAACAGATGGGAGAACGAGAAAAGGG GTTGCAAGGCCAGAGAGTTGAAGGGTTGTGAACTGCAGAAACTCCGACGG CGTTACGGCGGTATGTGCGCAGACGTCTTGGTTAGAAATGGAAATCCTTG GACGTGCTTCCGAGCAGGAAGTTCACTTTTTTGGAGGTCCGAAGCAGAGC AGACATGGACTGATGCTCGAAGCTCCTGTAGATCCGCAGCCAGTGATCTG GCAGTTATTAACAACTCAGGAAAGAATCAAGTTGCTGCGAGCATTAGCTC CCTCGACGGAAGTTGGATTGGATTGCGTGCTTCTCGAGGGAATTCTCTAC AGTGGGTGAACGGCTCGCCGTTGGTGGAAACCAATCTAGGGTTCAGCAGC AATACGAGTGCATCGTTTGAGAAACAGATCAAAACGCTTCACAATGTAAA TCTTGTAGACGCGTGCGTTTCGACCGACCGAAGGGGGGTTGAGGACAATT GGAACGTAGTGCCATGTGACGCCAAGCGATCCGCCATATGTGAGATGCCA TTTGACAGTCCAAATGCAAGTCAGCAATGTCCAACTGAAGCTACTTTCGA CCCACGGATGATACCTGAATATAAACCATTCAACAAGGTTGACTGCGATT TCTCAGATCCATCGTGCCCTGTGGAGGAAGATGAGGCTCTCAAGAGCGCG AACCCGATCTGTTCAGATAAGTCACTCGCCCCCAGAAGCGACTTCGATCG ACGGTGCTGTGGAGGAAGATCAGATTCTAGTGGCGAAACCTCATGCGGAA GCGATGGGTTATCTGTTGGCTTAATTGCGGGAGTCGTCATCGCGGCTGTT TTTCTCTTAGTGGCCTTCATACTAATCGTTCTATGGGTGAGGAAGAGGAG GAGGAAAATTGCGTCAAGAAAGGCCCTGCCGGAAACAGGGGGTGATACAA GCAGTGCAGGTAATCAGACATCTTCACCGCAAAACCCCTCTGCATTACAT GCCCCTGTGGACGACCGCAAACCTCTTGACGCTGTGGATTACCTGGCGAT GGTCAAAGACAGTGAAGGCTACAAGGAACCAGACCTAGAGATACTGGATA TGAATTGA back to top
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