Ggra1775.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1775.t1
Unique NameGgra1775.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:594810..595469 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1775Ggra1775Gracilaria gracilis GNS1m malegenetig00000050_pilon 594810..595469 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1.stop1Ggra1775.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 594810..594812 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1.CDS1Ggra1775.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 594810..595469 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1.exon1Ggra1775.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 594810..595469 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1.start1Ggra1775.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 595467..595469 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1775.t1Ggra1775.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 594810..595469 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=220bp
MSLTRIHTSALLHRKVWIIPFDEMWQLGLTDGPGDECPLALRALAEHVLS
GETVETAASNLAHRIGKHRRITALHRLGKPFILTQGTDREVVYVFALPIR
GVFHRKRRMLVSQVVKPVDFVQHVSILLRSSRDEVDPRLREHLCSRERAE
WMVRAIAYALRQFHIKGMVPRSNPMDNAAFNDTMCCKKDVDISRDLKMCG
ISCDQEGLYNILSYFPQTR*
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spliced messenger RNA

>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=660bp|location=Sequence derived from alignment at tig00000050_pilon:594810..595469- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTTGACACGAATTCATACTTCGGCTTTACTGCATCGCAAAGTGTG
GATTATACCCTTCGATGAGATGTGGCAACTTGGACTCACAGATGGACCAG
GAGATGAATGCCCTCTTGCACTTCGAGCTTTGGCTGAACATGTGCTTTCC
GGTGAAACAGTTGAAACGGCAGCAAGTAACCTTGCTCATCGAATAGGAAA
ACACCGACGAATCACAGCTTTGCATCGTCTCGGGAAACCATTCATATTGA
CACAAGGTACTGATCGTGAGGTTGTGTATGTTTTTGCCCTTCCTATCCGG
GGAGTGTTTCATCGGAAGAGAAGAATGTTGGTATCCCAAGTTGTAAAACC
TGTGGATTTTGTTCAACACGTTAGCATTTTGTTGAGGTCCTCACGAGATG
AAGTCGACCCGCGTTTAAGGGAACATTTGTGTTCAAGAGAGCGAGCTGAA
TGGATGGTAAGAGCGATAGCATACGCATTGCGGCAATTTCACATAAAGGG
AATGGTGCCACGAAGCAATCCTATGGATAATGCAGCTTTTAACGATACTA
TGTGTTGCAAGAAGGATGTGGACATATCCCGTGACCTCAAGATGTGTGGC
ATCTCATGCGATCAGGAAGGATTGTATAATATTCTGTCGTACTTCCCGCA
AACGCGGTGA
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protein sequence of Ggra1775.t1

>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MSLTRIHTSALLHRKVWIIPFDEMWQLGLTDGPGDECPLALRALAEHVLS
GETVETAASNLAHRIGKHRRITALHRLGKPFILTQGTDREVVYVFALPIR
GVFHRKRRMLVSQVVKPVDFVQHVSILLRSSRDEVDPRLREHLCSRERAE
WMVRAIAYALRQFHIKGMVPRSNPMDNAAFNDTMCCKKDVDISRDLKMCG
ISCDQEGLYNILSYFPQTR*
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mRNA from alignment at tig00000050_pilon:594810..595469-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=660bp|location=Sequence derived from alignment at tig00000050_pilon:594810..595469- (Gracilaria gracilis GNS1m male)
ATGTCTTTGACACGAATTCATACTTCGGCTTTACTGCATCGCAAAGTGTG
GATTATACCCTTCGATGAGATGTGGCAACTTGGACTCACAGATGGACCAG
GAGATGAATGCCCTCTTGCACTTCGAGCTTTGGCTGAACATGTGCTTTCC
GGTGAAACAGTTGAAACGGCAGCAAGTAACCTTGCTCATCGAATAGGAAA
ACACCGACGAATCACAGCTTTGCATCGTCTCGGGAAACCATTCATATTGA
CACAAGGTACTGATCGTGAGGTTGTGTATGTTTTTGCCCTTCCTATCCGG
GGAGTGTTTCATCGGAAGAGAAGAATGTTGGTATCCCAAGTTGTAAAACC
TGTGGATTTTGTTCAACACGTTAGCATTTTGTTGAGGTCCTCACGAGATG
AAGTCGACCCGCGTTTAAGGGAACATTTGTGTTCAAGAGAGCGAGCTGAA
TGGATGGTAAGAGCGATAGCATACGCATTGCGGCAATTTCACATAAAGGG
AATGGTGCCACGAAGCAATCCTATGGATAATGCAGCTTTTAACGATACTA
TGTGTTGCAAGAAGGATGTGGACATATCCCGTGACCTCAAGATGTGTGGC
ATCTCATGCGATCAGGAAGGATTGTATAATATTCTGTCGTACTTCCCGCA
AACGCGGTGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:594810..595469-

>Ggra1775.t1 ID=Ggra1775.t1|Name=Ggra1775.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=660bp|location=Sequence derived from alignment at tig00000050_pilon:594810..595469- (Gracilaria gracilis GNS1m male)
ATGTCTTTGACACGAATTCATACTTCGGCTTTACTGCATCGCAAAGTGTG
GATTATACCCTTCGATGAGATGTGGCAACTTGGACTCACAGATGGACCAG
GAGATGAATGCCCTCTTGCACTTCGAGCTTTGGCTGAACATGTGCTTTCC
GGTGAAACAGTTGAAACGGCAGCAAGTAACCTTGCTCATCGAATAGGAAA
ACACCGACGAATCACAGCTTTGCATCGTCTCGGGAAACCATTCATATTGA
CACAAGGTACTGATCGTGAGGTTGTGTATGTTTTTGCCCTTCCTATCCGG
GGAGTGTTTCATCGGAAGAGAAGAATGTTGGTATCCCAAGTTGTAAAACC
TGTGGATTTTGTTCAACACGTTAGCATTTTGTTGAGGTCCTCACGAGATG
AAGTCGACCCGCGTTTAAGGGAACATTTGTGTTCAAGAGAGCGAGCTGAA
TGGATGGTAAGAGCGATAGCATACGCATTGCGGCAATTTCACATAAAGGG
AATGGTGCCACGAAGCAATCCTATGGATAATGCAGCTTTTAACGATACTA
TGTGTTGCAAGAAGGATGTGGACATATCCCGTGACCTCAAGATGTGTGGC
ATCTCATGCGATCAGGAAGGATTGTATAATATTCTGTCGTACTTCCCGCA
AACGCGGTGA
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