Ggra175.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra175.t1
Unique NameGgra175.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length203
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000158_piloncontigtig00000158_pilon:41392..42000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra175Ggra175Gracilaria gracilis GNS1m malegenetig00000158_pilon 41392..42000 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra175.t1.stop1Ggra175.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000158_pilon 41392..41394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra175.t1.CDS1Ggra175.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000158_pilon 41392..42000 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra175.t1.exon1Ggra175.t1.exon1Gracilaria gracilis GNS1m maleexontig00000158_pilon 41392..42000 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra175.t1.start1Ggra175.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000158_pilon 41998..42000 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra175.t1Ggra175.t1Gracilaria gracilis GNS1m malepolypeptidetig00000158_pilon 41392..42000 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra175.t1 ID=Ggra175.t1|Name=Ggra175.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=203bp
MPTSLTSDEGALPAAVAAPLWLLVFGGVLSLRRGLFGVVAVRVGLGALCF
LWFVHALVPIDDAQDALQLVVPPAHVWVDAPVIVTVRQIVQPVLSHLPQR
PSPTPTSSSQPPRQGSQAPATPVQQPAISRFASAFACGRRSPLPFTARHT
DEGATLRGPCQKMTVIRALQNRQFMPLIRLRCSASSIVRRCSALCCRSNG
NA*
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spliced messenger RNA

>Ggra175.t1 ID=Ggra175.t1|Name=Ggra175.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=609bp|location=Sequence derived from alignment at tig00000158_pilon:41392..42000- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGACGTCGCTCACATCCGATGAGGGCGCGCTTCCTGCCGCCGTTGC
GGCGCCGCTGTGGCTGCTTGTTTTTGGCGGCGTTTTGTCGTTGAGACGTG
GTTTGTTTGGAGTTGTGGCTGTTCGAGTGGGCTTGGGTGCGCTTTGTTTC
TTGTGGTTTGTTCATGCTTTGGTGCCGATTGATGACGCACAGGACGCGTT
GCAGCTTGTGGTGCCACCGGCGCATGTTTGGGTCGATGCGCCGGTTATAG
TGACGGTGAGACAGATTGTGCAGCCGGTGCTGTCGCATCTGCCGCAGAGG
CCTTCGCCAACGCCGACGTCTAGTTCGCAACCACCGCGACAAGGTTCTCA
AGCGCCTGCTACGCCAGTGCAACAGCCGGCGATCTCGAGATTTGCAAGTG
CGTTTGCGTGCGGCCGGAGGTCGCCGCTGCCGTTCACAGCACGCCACACT
GACGAAGGCGCAACACTCCGCGGCCCCTGCCAGAAGATGACTGTCATCCG
AGCGCTTCAAAACCGCCAGTTCATGCCGCTCATTCGACTGCGCTGCTCCG
CATCATCTATCGTCAGGCGCTGCTCCGCTTTGTGTTGTCGCTCGAACGGC
AACGCTTAG
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protein sequence of Ggra175.t1

>Ggra175.t1 ID=Ggra175.t1|Name=Ggra175.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=203bp
MPTSLTSDEGALPAAVAAPLWLLVFGGVLSLRRGLFGVVAVRVGLGALCF
LWFVHALVPIDDAQDALQLVVPPAHVWVDAPVIVTVRQIVQPVLSHLPQR
PSPTPTSSSQPPRQGSQAPATPVQQPAISRFASAFACGRRSPLPFTARHT
DEGATLRGPCQKMTVIRALQNRQFMPLIRLRCSASSIVRRCSALCCRSNG
NA*
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mRNA from alignment at tig00000158_pilon:41392..42000-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra175.t1 ID=Ggra175.t1|Name=Ggra175.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=609bp|location=Sequence derived from alignment at tig00000158_pilon:41392..42000- (Gracilaria gracilis GNS1m male)
ATGCCGACGTCGCTCACATCCGATGAGGGCGCGCTTCCTGCCGCCGTTGC
GGCGCCGCTGTGGCTGCTTGTTTTTGGCGGCGTTTTGTCGTTGAGACGTG
GTTTGTTTGGAGTTGTGGCTGTTCGAGTGGGCTTGGGTGCGCTTTGTTTC
TTGTGGTTTGTTCATGCTTTGGTGCCGATTGATGACGCACAGGACGCGTT
GCAGCTTGTGGTGCCACCGGCGCATGTTTGGGTCGATGCGCCGGTTATAG
TGACGGTGAGACAGATTGTGCAGCCGGTGCTGTCGCATCTGCCGCAGAGG
CCTTCGCCAACGCCGACGTCTAGTTCGCAACCACCGCGACAAGGTTCTCA
AGCGCCTGCTACGCCAGTGCAACAGCCGGCGATCTCGAGATTTGCAAGTG
CGTTTGCGTGCGGCCGGAGGTCGCCGCTGCCGTTCACAGCACGCCACACT
GACGAAGGCGCAACACTCCGCGGCCCCTGCCAGAAGATGACTGTCATCCG
AGCGCTTCAAAACCGCCAGTTCATGCCGCTCATTCGACTGCGCTGCTCCG
CATCATCTATCGTCAGGCGCTGCTCCGCTTTGTGTTGTCGCTCGAACGGC
AACGCTTAG
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Coding sequence (CDS) from alignment at tig00000158_pilon:41392..42000-

>Ggra175.t1 ID=Ggra175.t1|Name=Ggra175.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=609bp|location=Sequence derived from alignment at tig00000158_pilon:41392..42000- (Gracilaria gracilis GNS1m male)
ATGCCGACGTCGCTCACATCCGATGAGGGCGCGCTTCCTGCCGCCGTTGC
GGCGCCGCTGTGGCTGCTTGTTTTTGGCGGCGTTTTGTCGTTGAGACGTG
GTTTGTTTGGAGTTGTGGCTGTTCGAGTGGGCTTGGGTGCGCTTTGTTTC
TTGTGGTTTGTTCATGCTTTGGTGCCGATTGATGACGCACAGGACGCGTT
GCAGCTTGTGGTGCCACCGGCGCATGTTTGGGTCGATGCGCCGGTTATAG
TGACGGTGAGACAGATTGTGCAGCCGGTGCTGTCGCATCTGCCGCAGAGG
CCTTCGCCAACGCCGACGTCTAGTTCGCAACCACCGCGACAAGGTTCTCA
AGCGCCTGCTACGCCAGTGCAACAGCCGGCGATCTCGAGATTTGCAAGTG
CGTTTGCGTGCGGCCGGAGGTCGCCGCTGCCGTTCACAGCACGCCACACT
GACGAAGGCGCAACACTCCGCGGCCCCTGCCAGAAGATGACTGTCATCCG
AGCGCTTCAAAACCGCCAGTTCATGCCGCTCATTCGACTGCGCTGCTCCG
CATCATCTATCGTCAGGCGCTGCTCCGCTTTGTGTTGTCGCTCGAACGGC
AACGCTTAG
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