Ggra1732.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1732.t1
Unique NameGgra1732.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length399
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:495177..496373 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1732Ggra1732Gracilaria gracilis GNS1m malegenetig00000050_pilon 495177..496373 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1732.t1.start1Ggra1732.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 495177..495179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1732.t1.CDS1Ggra1732.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 495177..496373 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1732.t1.exon1Ggra1732.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 495177..496373 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1732.t1.stop1Ggra1732.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 496371..496373 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1732.t1Ggra1732.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 495177..496373 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1732.t1 ID=Ggra1732.t1|Name=Ggra1732.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=399bp
MFVIELNPIVVAVLIALLVEIILSPLFDFTAEKLSALSNRFTLFRHGKGT
LGFDRSVVAPTAGIFLSRRYLCVSSLLKKILIFGFIIGELFLDTEPEDQL
EPVSGIILKRLDTFRDIVQWEEISEYAVRELSFIRRACNKGGTFFETAFV
DNKTLCGEVALFSVVFEEPSTENYNMNMPCAVGNLADERMVCEGNRVSFP
CSRRDFEERINDGSCTMFKMFELLNETALRYANIDSEGAVYGDVVRVNFR
IPVTTDLISNMTYAQRFEVPLDFTLLTASIVDDPFDDPGQPPTRTTNAFT
SVSFHTRVTMGTIICFSVVFAAFLLFLLLVALAHFASRNASETKTINPVN
TVQSIALLAAESDIRKKTRFQALLHRSENGPQVNLRILEASESSRIGA*
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spliced messenger RNA

>Ggra1732.t1 ID=Ggra1732.t1|Name=Ggra1732.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1197bp|location=Sequence derived from alignment at tig00000050_pilon:495177..496373+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTGTCATCGAGCTCAATCCCATCGTGGTTGCAGTGCTGATTGCGTT
ATTGGTGGAGATAATTCTTTCGCCTCTGTTTGACTTTACTGCCGAAAAAC
TGAGTGCTTTAAGCAATAGGTTTACATTGTTCCGTCATGGGAAGGGGACT
TTGGGCTTTGACCGATCGGTCGTGGCTCCAACAGCTGGAATTTTTCTTTC
CCGGAGGTATCTTTGCGTATCATCGTTGCTGAAGAAGATCTTGATATTCG
GATTCATAATTGGTGAACTGTTCCTGGACACTGAGCCCGAAGACCAGCTC
GAACCAGTATCTGGCATCATACTTAAGCGGTTGGACACATTTCGTGATAT
AGTGCAATGGGAAGAAATCAGCGAATATGCCGTTCGAGAACTTTCATTCA
TTCGCAGGGCTTGCAACAAGGGCGGGACGTTTTTCGAAACGGCATTTGTT
GACAATAAAACGCTCTGCGGTGAGGTCGCATTGTTCTCCGTGGTGTTTGA
AGAACCCAGCACTGAGAATTACAACATGAACATGCCTTGCGCCGTTGGTA
ACCTCGCAGATGAGAGAATGGTGTGTGAAGGGAACAGAGTCTCCTTTCCA
TGCTCGAGACGTGACTTTGAAGAACGAATCAACGACGGCAGCTGCACCAT
GTTCAAAATGTTTGAGCTTTTGAACGAGACTGCTCTTCGATATGCAAACA
TCGATTCTGAAGGAGCTGTGTATGGCGATGTTGTGAGAGTGAATTTTCGT
ATTCCAGTCACGACCGATCTGATTAGCAACATGACATACGCTCAGCGGTT
TGAAGTTCCCCTTGACTTCACGCTTCTAACGGCGTCTATAGTAGACGATC
CTTTCGACGACCCTGGGCAACCTCCTACCCGGACGACCAACGCTTTTACT
AGCGTATCATTCCACACGAGGGTGACTATGGGTACCATAATTTGCTTTAG
TGTTGTGTTCGCAGCATTCCTTTTATTCCTGCTTCTTGTCGCATTGGCTC
ACTTCGCAAGCCGTAATGCATCGGAAACTAAAACCATCAACCCAGTGAAT
ACGGTGCAAAGTATCGCATTGTTAGCTGCGGAGAGCGATATAAGAAAGAA
AACAAGATTCCAGGCGCTGCTTCATCGCTCAGAAAATGGTCCTCAGGTGA
ACCTGAGAATACTTGAAGCTTCTGAGAGTTCACGGATAGGAGCCTGA
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protein sequence of Ggra1732.t1

>Ggra1732.t1 ID=Ggra1732.t1|Name=Ggra1732.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=399bp
MFVIELNPIVVAVLIALLVEIILSPLFDFTAEKLSALSNRFTLFRHGKGT
LGFDRSVVAPTAGIFLSRRYLCVSSLLKKILIFGFIIGELFLDTEPEDQL
EPVSGIILKRLDTFRDIVQWEEISEYAVRELSFIRRACNKGGTFFETAFV
DNKTLCGEVALFSVVFEEPSTENYNMNMPCAVGNLADERMVCEGNRVSFP
CSRRDFEERINDGSCTMFKMFELLNETALRYANIDSEGAVYGDVVRVNFR
IPVTTDLISNMTYAQRFEVPLDFTLLTASIVDDPFDDPGQPPTRTTNAFT
SVSFHTRVTMGTIICFSVVFAAFLLFLLLVALAHFASRNASETKTINPVN
TVQSIALLAAESDIRKKTRFQALLHRSENGPQVNLRILEASESSRIGA*
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mRNA from alignment at tig00000050_pilon:495177..496373+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1732.t1 ID=Ggra1732.t1|Name=Ggra1732.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1197bp|location=Sequence derived from alignment at tig00000050_pilon:495177..496373+ (Gracilaria gracilis GNS1m male)
ATGTTTGTCATCGAGCTCAATCCCATCGTGGTTGCAGTGCTGATTGCGTT
ATTGGTGGAGATAATTCTTTCGCCTCTGTTTGACTTTACTGCCGAAAAAC
TGAGTGCTTTAAGCAATAGGTTTACATTGTTCCGTCATGGGAAGGGGACT
TTGGGCTTTGACCGATCGGTCGTGGCTCCAACAGCTGGAATTTTTCTTTC
CCGGAGGTATCTTTGCGTATCATCGTTGCTGAAGAAGATCTTGATATTCG
GATTCATAATTGGTGAACTGTTCCTGGACACTGAGCCCGAAGACCAGCTC
GAACCAGTATCTGGCATCATACTTAAGCGGTTGGACACATTTCGTGATAT
AGTGCAATGGGAAGAAATCAGCGAATATGCCGTTCGAGAACTTTCATTCA
TTCGCAGGGCTTGCAACAAGGGCGGGACGTTTTTCGAAACGGCATTTGTT
GACAATAAAACGCTCTGCGGTGAGGTCGCATTGTTCTCCGTGGTGTTTGA
AGAACCCAGCACTGAGAATTACAACATGAACATGCCTTGCGCCGTTGGTA
ACCTCGCAGATGAGAGAATGGTGTGTGAAGGGAACAGAGTCTCCTTTCCA
TGCTCGAGACGTGACTTTGAAGAACGAATCAACGACGGCAGCTGCACCAT
GTTCAAAATGTTTGAGCTTTTGAACGAGACTGCTCTTCGATATGCAAACA
TCGATTCTGAAGGAGCTGTGTATGGCGATGTTGTGAGAGTGAATTTTCGT
ATTCCAGTCACGACCGATCTGATTAGCAACATGACATACGCTCAGCGGTT
TGAAGTTCCCCTTGACTTCACGCTTCTAACGGCGTCTATAGTAGACGATC
CTTTCGACGACCCTGGGCAACCTCCTACCCGGACGACCAACGCTTTTACT
AGCGTATCATTCCACACGAGGGTGACTATGGGTACCATAATTTGCTTTAG
TGTTGTGTTCGCAGCATTCCTTTTATTCCTGCTTCTTGTCGCATTGGCTC
ACTTCGCAAGCCGTAATGCATCGGAAACTAAAACCATCAACCCAGTGAAT
ACGGTGCAAAGTATCGCATTGTTAGCTGCGGAGAGCGATATAAGAAAGAA
AACAAGATTCCAGGCGCTGCTTCATCGCTCAGAAAATGGTCCTCAGGTGA
ACCTGAGAATACTTGAAGCTTCTGAGAGTTCACGGATAGGAGCCTGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:495177..496373+

>Ggra1732.t1 ID=Ggra1732.t1|Name=Ggra1732.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1197bp|location=Sequence derived from alignment at tig00000050_pilon:495177..496373+ (Gracilaria gracilis GNS1m male)
ATGTTTGTCATCGAGCTCAATCCCATCGTGGTTGCAGTGCTGATTGCGTT
ATTGGTGGAGATAATTCTTTCGCCTCTGTTTGACTTTACTGCCGAAAAAC
TGAGTGCTTTAAGCAATAGGTTTACATTGTTCCGTCATGGGAAGGGGACT
TTGGGCTTTGACCGATCGGTCGTGGCTCCAACAGCTGGAATTTTTCTTTC
CCGGAGGTATCTTTGCGTATCATCGTTGCTGAAGAAGATCTTGATATTCG
GATTCATAATTGGTGAACTGTTCCTGGACACTGAGCCCGAAGACCAGCTC
GAACCAGTATCTGGCATCATACTTAAGCGGTTGGACACATTTCGTGATAT
AGTGCAATGGGAAGAAATCAGCGAATATGCCGTTCGAGAACTTTCATTCA
TTCGCAGGGCTTGCAACAAGGGCGGGACGTTTTTCGAAACGGCATTTGTT
GACAATAAAACGCTCTGCGGTGAGGTCGCATTGTTCTCCGTGGTGTTTGA
AGAACCCAGCACTGAGAATTACAACATGAACATGCCTTGCGCCGTTGGTA
ACCTCGCAGATGAGAGAATGGTGTGTGAAGGGAACAGAGTCTCCTTTCCA
TGCTCGAGACGTGACTTTGAAGAACGAATCAACGACGGCAGCTGCACCAT
GTTCAAAATGTTTGAGCTTTTGAACGAGACTGCTCTTCGATATGCAAACA
TCGATTCTGAAGGAGCTGTGTATGGCGATGTTGTGAGAGTGAATTTTCGT
ATTCCAGTCACGACCGATCTGATTAGCAACATGACATACGCTCAGCGGTT
TGAAGTTCCCCTTGACTTCACGCTTCTAACGGCGTCTATAGTAGACGATC
CTTTCGACGACCCTGGGCAACCTCCTACCCGGACGACCAACGCTTTTACT
AGCGTATCATTCCACACGAGGGTGACTATGGGTACCATAATTTGCTTTAG
TGTTGTGTTCGCAGCATTCCTTTTATTCCTGCTTCTTGTCGCATTGGCTC
ACTTCGCAAGCCGTAATGCATCGGAAACTAAAACCATCAACCCAGTGAAT
ACGGTGCAAAGTATCGCATTGTTAGCTGCGGAGAGCGATATAAGAAAGAA
AACAAGATTCCAGGCGCTGCTTCATCGCTCAGAAAATGGTCCTCAGGTGA
ACCTGAGAATACTTGAAGCTTCTGAGAGTTCACGGATAGGAGCCTGA
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