Ggra1630.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1630.t1
Unique NameGgra1630.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:107457..108563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1630Ggra1630Gracilaria gracilis GNS1m malegenetig00000050_pilon 107457..108563 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1630.t1.stop1Ggra1630.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 107457..107459 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1630.t1.CDS1Ggra1630.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 107457..108563 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1630.t1.exon1Ggra1630.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 107457..108563 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1630.t1.start1Ggra1630.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 108561..108563 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1630.t1Ggra1630.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 107457..108563 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1630.t1 ID=Ggra1630.t1|Name=Ggra1630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=369bp
MKLSMILVLIALTFFSSVFRGASASVLTKLEDGYKLLAKNRRVFKPSGDH
SPGSRKVIRVWPATIQCSSHGVATLYINGIIYSKLFSPHPWSMTVGLAKG
DVIAIKAEKTDNDVGVMVTIAWKGRTYRSGRHIFKVRSDSYFNWNAIEQD
TWNRAVRGRNGKPKLITSFCSWKKADIVEFKKDKFDKKAFFIWSLHSSRN
HGVHAKTPAQTVYIRHVMGGDKCPKDSKKGAKTKKRNSNDGAGKKKRNEK
NSIDTSTNEDKRESQKQKNSSQNEVQGGMDIGIGGQSDTRTCKCRLVSMH
GGTCFDMVTPGDDEGPCSARTCEPQYECAHDGKTMCFMRRMLTRVVMTGP
RSCKKISAATDLLVPYKR*
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spliced messenger RNA

>Ggra1630.t1 ID=Ggra1630.t1|Name=Ggra1630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1107bp|location=Sequence derived from alignment at tig00000050_pilon:107457..108563- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTTGTCGATGATTTTGGTTCTCATTGCTCTTACATTCTTTTCTTC
AGTTTTCCGAGGTGCTTCAGCCAGCGTTCTAACGAAGTTGGAAGACGGGT
ACAAGCTCCTTGCCAAGAATCGCCGTGTATTCAAACCGTCTGGAGACCAT
TCTCCAGGTTCACGAAAGGTAATTAGAGTTTGGCCAGCTACAATCCAATG
TTCCTCCCATGGGGTGGCTACCCTTTACATCAATGGAATAATATATAGCA
AGCTCTTCTCACCACATCCTTGGAGCATGACGGTTGGCCTTGCTAAAGGA
GACGTTATCGCCATCAAGGCGGAAAAGACTGACAATGATGTAGGAGTTAT
GGTAACCATAGCTTGGAAAGGTCGAACGTATCGATCAGGCCGACATATCT
TCAAAGTACGCAGCGACAGCTATTTTAATTGGAATGCAATTGAGCAAGAT
ACCTGGAACAGAGCTGTTCGAGGCCGTAATGGAAAACCGAAGCTAATCAC
TTCGTTCTGTTCTTGGAAGAAAGCCGATATCGTAGAATTCAAGAAGGACA
AATTCGACAAGAAAGCCTTTTTCATTTGGAGCTTGCACTCCTCTCGCAAT
CACGGAGTGCATGCCAAAACACCAGCGCAGACAGTCTACATTCGTCATGT
GATGGGTGGCGACAAGTGTCCGAAAGATTCCAAGAAGGGCGCTAAGACAA
AGAAAAGAAACAGTAATGATGGTGCTGGAAAGAAAAAGCGCAATGAGAAG
AACAGCATAGATACATCAACGAATGAAGATAAGAGAGAAAGTCAGAAACA
GAAGAACAGTTCTCAGAATGAAGTACAGGGTGGCATGGACATTGGCATTG
GAGGGCAGTCCGACACGAGAACTTGTAAGTGCAGATTGGTTTCCATGCAT
GGAGGCACTTGCTTCGATATGGTCACTCCGGGAGATGACGAAGGTCCTTG
CAGTGCTCGTACATGTGAGCCGCAATACGAATGTGCACACGATGGTAAGA
CCATGTGCTTCATGCGCCGTATGTTGACTAGGGTGGTTATGACTGGACCA
CGGTCTTGCAAGAAGATTTCTGCGGCAACTGATCTTCTTGTACCGTACAA
GCGATAA
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protein sequence of Ggra1630.t1

>Ggra1630.t1 ID=Ggra1630.t1|Name=Ggra1630.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MKLSMILVLIALTFFSSVFRGASASVLTKLEDGYKLLAKNRRVFKPSGDH
SPGSRKVIRVWPATIQCSSHGVATLYINGIIYSKLFSPHPWSMTVGLAKG
DVIAIKAEKTDNDVGVMVTIAWKGRTYRSGRHIFKVRSDSYFNWNAIEQD
TWNRAVRGRNGKPKLITSFCSWKKADIVEFKKDKFDKKAFFIWSLHSSRN
HGVHAKTPAQTVYIRHVMGGDKCPKDSKKGAKTKKRNSNDGAGKKKRNEK
NSIDTSTNEDKRESQKQKNSSQNEVQGGMDIGIGGQSDTRTCKCRLVSMH
GGTCFDMVTPGDDEGPCSARTCEPQYECAHDGKTMCFMRRMLTRVVMTGP
RSCKKISAATDLLVPYKR*
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mRNA from alignment at tig00000050_pilon:107457..108563-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1630.t1 ID=Ggra1630.t1|Name=Ggra1630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1107bp|location=Sequence derived from alignment at tig00000050_pilon:107457..108563- (Gracilaria gracilis GNS1m male)
ATGAAGTTGTCGATGATTTTGGTTCTCATTGCTCTTACATTCTTTTCTTC
AGTTTTCCGAGGTGCTTCAGCCAGCGTTCTAACGAAGTTGGAAGACGGGT
ACAAGCTCCTTGCCAAGAATCGCCGTGTATTCAAACCGTCTGGAGACCAT
TCTCCAGGTTCACGAAAGGTAATTAGAGTTTGGCCAGCTACAATCCAATG
TTCCTCCCATGGGGTGGCTACCCTTTACATCAATGGAATAATATATAGCA
AGCTCTTCTCACCACATCCTTGGAGCATGACGGTTGGCCTTGCTAAAGGA
GACGTTATCGCCATCAAGGCGGAAAAGACTGACAATGATGTAGGAGTTAT
GGTAACCATAGCTTGGAAAGGTCGAACGTATCGATCAGGCCGACATATCT
TCAAAGTACGCAGCGACAGCTATTTTAATTGGAATGCAATTGAGCAAGAT
ACCTGGAACAGAGCTGTTCGAGGCCGTAATGGAAAACCGAAGCTAATCAC
TTCGTTCTGTTCTTGGAAGAAAGCCGATATCGTAGAATTCAAGAAGGACA
AATTCGACAAGAAAGCCTTTTTCATTTGGAGCTTGCACTCCTCTCGCAAT
CACGGAGTGCATGCCAAAACACCAGCGCAGACAGTCTACATTCGTCATGT
GATGGGTGGCGACAAGTGTCCGAAAGATTCCAAGAAGGGCGCTAAGACAA
AGAAAAGAAACAGTAATGATGGTGCTGGAAAGAAAAAGCGCAATGAGAAG
AACAGCATAGATACATCAACGAATGAAGATAAGAGAGAAAGTCAGAAACA
GAAGAACAGTTCTCAGAATGAAGTACAGGGTGGCATGGACATTGGCATTG
GAGGGCAGTCCGACACGAGAACTTGTAAGTGCAGATTGGTTTCCATGCAT
GGAGGCACTTGCTTCGATATGGTCACTCCGGGAGATGACGAAGGTCCTTG
CAGTGCTCGTACATGTGAGCCGCAATACGAATGTGCACACGATGGTAAGA
CCATGTGCTTCATGCGCCGTATGTTGACTAGGGTGGTTATGACTGGACCA
CGGTCTTGCAAGAAGATTTCTGCGGCAACTGATCTTCTTGTACCGTACAA
GCGATAA
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Coding sequence (CDS) from alignment at tig00000050_pilon:107457..108563-

>Ggra1630.t1 ID=Ggra1630.t1|Name=Ggra1630.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1107bp|location=Sequence derived from alignment at tig00000050_pilon:107457..108563- (Gracilaria gracilis GNS1m male)
ATGAAGTTGTCGATGATTTTGGTTCTCATTGCTCTTACATTCTTTTCTTC
AGTTTTCCGAGGTGCTTCAGCCAGCGTTCTAACGAAGTTGGAAGACGGGT
ACAAGCTCCTTGCCAAGAATCGCCGTGTATTCAAACCGTCTGGAGACCAT
TCTCCAGGTTCACGAAAGGTAATTAGAGTTTGGCCAGCTACAATCCAATG
TTCCTCCCATGGGGTGGCTACCCTTTACATCAATGGAATAATATATAGCA
AGCTCTTCTCACCACATCCTTGGAGCATGACGGTTGGCCTTGCTAAAGGA
GACGTTATCGCCATCAAGGCGGAAAAGACTGACAATGATGTAGGAGTTAT
GGTAACCATAGCTTGGAAAGGTCGAACGTATCGATCAGGCCGACATATCT
TCAAAGTACGCAGCGACAGCTATTTTAATTGGAATGCAATTGAGCAAGAT
ACCTGGAACAGAGCTGTTCGAGGCCGTAATGGAAAACCGAAGCTAATCAC
TTCGTTCTGTTCTTGGAAGAAAGCCGATATCGTAGAATTCAAGAAGGACA
AATTCGACAAGAAAGCCTTTTTCATTTGGAGCTTGCACTCCTCTCGCAAT
CACGGAGTGCATGCCAAAACACCAGCGCAGACAGTCTACATTCGTCATGT
GATGGGTGGCGACAAGTGTCCGAAAGATTCCAAGAAGGGCGCTAAGACAA
AGAAAAGAAACAGTAATGATGGTGCTGGAAAGAAAAAGCGCAATGAGAAG
AACAGCATAGATACATCAACGAATGAAGATAAGAGAGAAAGTCAGAAACA
GAAGAACAGTTCTCAGAATGAAGTACAGGGTGGCATGGACATTGGCATTG
GAGGGCAGTCCGACACGAGAACTTGTAAGTGCAGATTGGTTTCCATGCAT
GGAGGCACTTGCTTCGATATGGTCACTCCGGGAGATGACGAAGGTCCTTG
CAGTGCTCGTACATGTGAGCCGCAATACGAATGTGCACACGATGGTAAGA
CCATGTGCTTCATGCGCCGTATGTTGACTAGGGTGGTTATGACTGGACCA
CGGTCTTGCAAGAAGATTTCTGCGGCAACTGATCTTCTTGTACCGTACAA
GCGATAA
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