Ggra1371.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1371.t1
Unique NameGgra1371.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:394974..396251 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1371Ggra1371Gracilaria gracilis GNS1m malegenetig00000092_pilon 394974..396251 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1.stop1Ggra1371.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 394974..394976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1.CDS1Ggra1371.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 394974..396251 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1.exon1Ggra1371.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 394974..396251 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1.start1Ggra1371.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 396249..396251 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1Ggra1371.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 394974..396251 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp
MGIHRPYRSDKENVPRQSRPWDNGAIPPPQSAPLADFFNAPLHPLPPPRA
DNRQLKPPYEPPIPPPLAALPLPPKPPASHPRDDAVESVPTVGLCIQDDS
PLPHLSRSRTSSRPLARPPASAHSRMSAFSHRGSVSFALPDAPQKATSRP
RPQSKYHSIRLSSTENLNFLPTSASFLDFNDDERLQKLDEEPPAQNPVWH
GLSFDDADSFSTFGTLPLDNNVPPAPLPPSKEDMPRPDSNESHAPPMSST
RPDDDDGGLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAEAE
KKGVRNSVKVPRASSVSQAQGELMMRSRIFRRWNLRYASIVHQGYFGAVL
LLFRPETKGVLGNIALRNSKMIALSETTVRRLESRKVNVPYMFEIRTSQR
TYTFGCKDADGREFWVNHLSLPGEG*
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spliced messenger RNA

>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1278bp|location=Sequence derived from alignment at tig00000092_pilon:394974..396251- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCATTCATCGACCGTACCGCTCCGACAAGGAGAACGTGCCGCGTCA
ATCTCGTCCGTGGGACAACGGCGCCATTCCGCCGCCGCAGAGCGCGCCGC
TTGCGGACTTCTTCAACGCGCCGCTGCACCCGTTGCCGCCGCCTCGTGCC
GACAATCGCCAGCTAAAGCCGCCGTACGAGCCGCCCATCCCGCCGCCTCT
GGCCGCGCTGCCCTTGCCTCCCAAGCCGCCTGCGTCGCACCCGCGCGACG
ACGCCGTGGAGAGCGTGCCCACCGTCGGCCTGTGCATCCAGGACGACAGC
CCTCTGCCGCATCTCAGTCGCTCGCGCACCAGCTCGCGCCCGTTGGCCAG
GCCGCCTGCCTCCGCCCATTCCAGGATGTCGGCGTTTTCCCATCGAGGAT
CCGTGTCGTTTGCGTTGCCGGACGCGCCGCAAAAGGCCACCAGTCGACCT
CGGCCCCAATCCAAGTATCATTCCATCCGCCTCAGTAGCACGGAAAACCT
CAACTTCTTGCCCACGTCGGCGTCGTTCCTGGACTTCAACGACGACGAGC
GTCTACAGAAGCTCGACGAAGAACCACCGGCGCAGAACCCCGTGTGGCAC
GGACTGTCATTCGACGACGCAGATTCCTTCTCCACGTTCGGCACGTTGCC
GTTGGACAACAACGTGCCACCGGCGCCACTGCCGCCGTCGAAGGAGGATA
TGCCGCGCCCGGACTCCAACGAAAGTCACGCGCCGCCCATGTCGAGCACC
CGACCTGATGACGATGACGGCGGCTTGGATGTGCCAAAGCGCATCGTGTC
GCGTCCAGGCGCTTCAGACGCGCTCAAGGATCTACAGAGAGCCAGCGTGA
CGGCGGGTAGGGAACTGGCGTCCAGTCTACGCGCCATGGCGGAGGCTGAG
AAGAAGGGCGTACGCAACAGCGTCAAAGTGCCTCGCGCTAGCAGCGTTTC
ACAGGCGCAGGGTGAACTGATGATGCGCAGTCGTATCTTCCGTCGGTGGA
ACTTGCGTTATGCTTCCATCGTGCATCAGGGCTACTTTGGCGCAGTGTTG
TTGCTGTTCCGCCCGGAGACCAAGGGCGTGTTAGGCAATATCGCGCTGAG
GAATAGCAAGATGATTGCTTTGAGTGAGACGACGGTGCGCAGGCTGGAGT
CGAGAAAGGTGAACGTGCCGTATATGTTCGAGATTCGCACCAGTCAACGT
ACGTATACGTTCGGATGTAAGGACGCGGATGGAAGGGAGTTTTGGGTAAA
TCACCTCAGTTTACCGGGCGAGGGATGA
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protein sequence of Ggra1371.t1

>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MGIHRPYRSDKENVPRQSRPWDNGAIPPPQSAPLADFFNAPLHPLPPPRA
DNRQLKPPYEPPIPPPLAALPLPPKPPASHPRDDAVESVPTVGLCIQDDS
PLPHLSRSRTSSRPLARPPASAHSRMSAFSHRGSVSFALPDAPQKATSRP
RPQSKYHSIRLSSTENLNFLPTSASFLDFNDDERLQKLDEEPPAQNPVWH
GLSFDDADSFSTFGTLPLDNNVPPAPLPPSKEDMPRPDSNESHAPPMSST
RPDDDDGGLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAEAE
KKGVRNSVKVPRASSVSQAQGELMMRSRIFRRWNLRYASIVHQGYFGAVL
LLFRPETKGVLGNIALRNSKMIALSETTVRRLESRKVNVPYMFEIRTSQR
TYTFGCKDADGREFWVNHLSLPGEG*
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mRNA from alignment at tig00000092_pilon:394974..396251-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1278bp|location=Sequence derived from alignment at tig00000092_pilon:394974..396251- (Gracilaria gracilis GNS1m male)
ATGGGCATTCATCGACCGTACCGCTCCGACAAGGAGAACGTGCCGCGTCA
ATCTCGTCCGTGGGACAACGGCGCCATTCCGCCGCCGCAGAGCGCGCCGC
TTGCGGACTTCTTCAACGCGCCGCTGCACCCGTTGCCGCCGCCTCGTGCC
GACAATCGCCAGCTAAAGCCGCCGTACGAGCCGCCCATCCCGCCGCCTCT
GGCCGCGCTGCCCTTGCCTCCCAAGCCGCCTGCGTCGCACCCGCGCGACG
ACGCCGTGGAGAGCGTGCCCACCGTCGGCCTGTGCATCCAGGACGACAGC
CCTCTGCCGCATCTCAGTCGCTCGCGCACCAGCTCGCGCCCGTTGGCCAG
GCCGCCTGCCTCCGCCCATTCCAGGATGTCGGCGTTTTCCCATCGAGGAT
CCGTGTCGTTTGCGTTGCCGGACGCGCCGCAAAAGGCCACCAGTCGACCT
CGGCCCCAATCCAAGTATCATTCCATCCGCCTCAGTAGCACGGAAAACCT
CAACTTCTTGCCCACGTCGGCGTCGTTCCTGGACTTCAACGACGACGAGC
GTCTACAGAAGCTCGACGAAGAACCACCGGCGCAGAACCCCGTGTGGCAC
GGACTGTCATTCGACGACGCAGATTCCTTCTCCACGTTCGGCACGTTGCC
GTTGGACAACAACGTGCCACCGGCGCCACTGCCGCCGTCGAAGGAGGATA
TGCCGCGCCCGGACTCCAACGAAAGTCACGCGCCGCCCATGTCGAGCACC
CGACCTGATGACGATGACGGCGGCTTGGATGTGCCAAAGCGCATCGTGTC
GCGTCCAGGCGCTTCAGACGCGCTCAAGGATCTACAGAGAGCCAGCGTGA
CGGCGGGTAGGGAACTGGCGTCCAGTCTACGCGCCATGGCGGAGGCTGAG
AAGAAGGGCGTACGCAACAGCGTCAAAGTGCCTCGCGCTAGCAGCGTTTC
ACAGGCGCAGGGTGAACTGATGATGCGCAGTCGTATCTTCCGTCGGTGGA
ACTTGCGTTATGCTTCCATCGTGCATCAGGGCTACTTTGGCGCAGTGTTG
TTGCTGTTCCGCCCGGAGACCAAGGGCGTGTTAGGCAATATCGCGCTGAG
GAATAGCAAGATGATTGCTTTGAGTGAGACGACGGTGCGCAGGCTGGAGT
CGAGAAAGGTGAACGTGCCGTATATGTTCGAGATTCGCACCAGTCAACGT
ACGTATACGTTCGGATGTAAGGACGCGGATGGAAGGGAGTTTTGGGTAAA
TCACCTCAGTTTACCGGGCGAGGGATGA
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Coding sequence (CDS) from alignment at tig00000092_pilon:394974..396251-

>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1278bp|location=Sequence derived from alignment at tig00000092_pilon:394974..396251- (Gracilaria gracilis GNS1m male)
ATGGGCATTCATCGACCGTACCGCTCCGACAAGGAGAACGTGCCGCGTCA
ATCTCGTCCGTGGGACAACGGCGCCATTCCGCCGCCGCAGAGCGCGCCGC
TTGCGGACTTCTTCAACGCGCCGCTGCACCCGTTGCCGCCGCCTCGTGCC
GACAATCGCCAGCTAAAGCCGCCGTACGAGCCGCCCATCCCGCCGCCTCT
GGCCGCGCTGCCCTTGCCTCCCAAGCCGCCTGCGTCGCACCCGCGCGACG
ACGCCGTGGAGAGCGTGCCCACCGTCGGCCTGTGCATCCAGGACGACAGC
CCTCTGCCGCATCTCAGTCGCTCGCGCACCAGCTCGCGCCCGTTGGCCAG
GCCGCCTGCCTCCGCCCATTCCAGGATGTCGGCGTTTTCCCATCGAGGAT
CCGTGTCGTTTGCGTTGCCGGACGCGCCGCAAAAGGCCACCAGTCGACCT
CGGCCCCAATCCAAGTATCATTCCATCCGCCTCAGTAGCACGGAAAACCT
CAACTTCTTGCCCACGTCGGCGTCGTTCCTGGACTTCAACGACGACGAGC
GTCTACAGAAGCTCGACGAAGAACCACCGGCGCAGAACCCCGTGTGGCAC
GGACTGTCATTCGACGACGCAGATTCCTTCTCCACGTTCGGCACGTTGCC
GTTGGACAACAACGTGCCACCGGCGCCACTGCCGCCGTCGAAGGAGGATA
TGCCGCGCCCGGACTCCAACGAAAGTCACGCGCCGCCCATGTCGAGCACC
CGACCTGATGACGATGACGGCGGCTTGGATGTGCCAAAGCGCATCGTGTC
GCGTCCAGGCGCTTCAGACGCGCTCAAGGATCTACAGAGAGCCAGCGTGA
CGGCGGGTAGGGAACTGGCGTCCAGTCTACGCGCCATGGCGGAGGCTGAG
AAGAAGGGCGTACGCAACAGCGTCAAAGTGCCTCGCGCTAGCAGCGTTTC
ACAGGCGCAGGGTGAACTGATGATGCGCAGTCGTATCTTCCGTCGGTGGA
ACTTGCGTTATGCTTCCATCGTGCATCAGGGCTACTTTGGCGCAGTGTTG
TTGCTGTTCCGCCCGGAGACCAAGGGCGTGTTAGGCAATATCGCGCTGAG
GAATAGCAAGATGATTGCTTTGAGTGAGACGACGGTGCGCAGGCTGGAGT
CGAGAAAGGTGAACGTGCCGTATATGTTCGAGATTCGCACCAGTCAACGT
ACGTATACGTTCGGATGTAAGGACGCGGATGGAAGGGAGTTTTGGGTAAA
TCACCTCAGTTTACCGGGCGAGGGATGA
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