Ggra1371.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1371.t1
Unique NameGgra1371.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Homology
BLAST of Ggra1371.t1 vs. uniprot
Match: A0A2V3J201 (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J201_9FLOR)

HSP 1 Score: 512 bits (1318), Expect = 7.030e-178
Identity = 298/441 (67.57%), Postives = 339/441 (76.87%), Query Frame = 0
Query:    1 MGIHRPYRSDKENVP--RQSRPWDNGAIPP---PQSAPLADFFNAPLHPLPPP-------RADNRQLKPPYEPPIPPPLAALPLPPKPPASHPRDDAVESVPTVGLCIQDDSPLPHLSRSR-TSSRPLARPPASAHSRMSA-FSHRGSVSFALPDAPQKATSRPRPQSKYHSIRLSSTENLNFLPTSASFLDFNDDERLQKLDEE-PPAQNPVWHGLSFDDADSFSTFGTLPLDNNVPPAPLPPSKEDMPRPDSNESHAPPM-SSTRPDDDDGGLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAEAEKKGVRNSVKVPRASSVSQAQGELMMRSRIFRRWNLRYASIVHQGYFGAVLLLFRPETKGVLGNIALRNSKMIALSETTVRRLESRKVNVPYMFEIRTSQRTYTFGCKDADGREFWVNHLSLPGEG 425
            MGI    RSDKENVP  R SRPWDN + PP          DFF    +P P         R  NR+LKPPY P IPPPLAALPLPPKPP SHPRDDA+ES+P VGLCIQDD+P P LSRSR T++ P +    S H  M   FS+R SV F     P   T   RP S   S RL + ENLNFLP+S+SFLDFNDDERLQKL +   P QNP+WHGLSFDDADSFSTFGTL  DN+VP AP+PP+++ MPRP+S+ES A P+ +++ PDDDDG LDVPKRIVSRP A+ ALKDLQRAS+TAGRELASSLR MAEAEKKG   +  VPRA SVS+AQGEL++RSRIFRRWNLRYASIVHQGYFGAVLLLFRPE++GVLG+IALRNSKMIAL+ET VRRLES+K N P+MFE+RTSQRTYTFGCK+A+GREFWVNHLSLP  G
Sbjct:    1 MGIPG-LRSDKENVPLPRFSRPWDNVSPPPIXXXXXXXXXDFF---ANPAPSXXXXXXXTRLGNRELKPPYAPLIPPPLAALPLPPKPPPSHPRDDAIESIPKVGLCIQDDTPPPRLSRSRATTTEPSSS--TSDHPDMPPRFSYRRSVRF-----PSVNTVPDRPDSSARSFRLVAAENLNFLPSSSSFLDFNDDERLQKLSQNVAPQQNPLWHGLSFDDADSFSTFGTL--DNHVPDAPIPPTQDQMPRPNSDESQAAPLPTASSPDDDDGALDVPKRIVSRPAATGALKDLQRASITAGRELASSLRMMAEAEKKG-NVAASVPRAGSVSKAQGELLLRSRIFRRWNLRYASIVHQGYFGAVLLLFRPESRGVLGSIALRNSKMIALTETAVRRLESKKPNSPFMFELRTSQRTYTFGCKEAEGREFWVNHLSLPDGG 427          
BLAST of Ggra1371.t1 vs. uniprot
Match: S0F3M0 (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3M0_CHOCR)

HSP 1 Score: 230 bits (586), Expect = 1.340e-66
Identity = 151/329 (45.90%), Postives = 199/329 (60.49%), Query Frame = 0
Query:  126 MSAFSHRGSVSFALPDAPQKATS-RPRPQSKYHSIRLSSTE---NLNFLPTSASFLDFNDDERLQKLDEEPPAQN---------PVWHGLSFDDADSFSTFGTLP----LDNNVPPAPLPPSKEDMPRPDSNESHAP--PMSSTRPDD-----------DDGGLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAEAEKKGVRNSVKVPRASSVSQAQGELMMRSRIFRRWNLRYASIVHQGYFGAVLLLFRPETKGVL---GNIALRNSKMIALSETTVRRLES-RKVNVPYMFEIRTSQRTYTFGCKDADGREFWVNHLS 420
            M  FS+R S       +P      R  P+S + + R    E   +LNFL   +SFLDF+DD RL  LD      N         P    +SFD+ADSF TF TL     +  ++  + LP    D  RP SNES  P  PM S    +             GGLDVP R   RPGA++AL+DLQRASVTAG E++++LR  + A++K  R + K      VS+AQG++++RSRIFRR+NLRYAS+VHQGYFGAVLLLF P++K  +   G  AL++SKMIAL+E++VRR+++ RK N  YMFE++T QRTYTF C D   REFW+N+LS
Sbjct:  190 MPRFSYRQSYRMEKVQSPIPDDKVRSPPKSSFRNSRRLGNEGQSDLNFLQEPSSFLDFDDDSRLTPLDSSAAMGNGKGAGMGGAPAMGIMSFDEADSFDTFATLSKGLKIAQDLKGSILPADVGDDERPGSNESEKPLFPMMSFSKKNRKXXXXXXXXXXXGGLDVPNRFTRRPGAANALRDLQRASVTAGNEISANLRFASNAQEKVKRANTK----ERVSKAQGDILLRSRIFRRFNLRYASLVHQGYFGAVLLLFTPDSKAGISPSGTFALKSSKMIALAESSVRRVDNARKTNQGYMFELKTCQRTYTFACNDEKSREFWINNLS 514          
The following BLAST results are available for this feature:
BLAST of Ggra1371.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2017.030e-17867.57PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
S0F3M01.340e-6645.90PH domain-containing protein n=1 Tax=Chondrus cris... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 302..422
e-value: 2.1E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..333
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 354..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 334..353
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 315..420
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 316..424
score: 9.5333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:394974..396251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1371.t1Ggra1371.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 394974..396251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1371.t1 ID=Ggra1371.t1|Name=Ggra1371.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MGIHRPYRSDKENVPRQSRPWDNGAIPPPQSAPLADFFNAPLHPLPPPRA
DNRQLKPPYEPPIPPPLAALPLPPKPPASHPRDDAVESVPTVGLCIQDDS
PLPHLSRSRTSSRPLARPPASAHSRMSAFSHRGSVSFALPDAPQKATSRP
RPQSKYHSIRLSSTENLNFLPTSASFLDFNDDERLQKLDEEPPAQNPVWH
GLSFDDADSFSTFGTLPLDNNVPPAPLPPSKEDMPRPDSNESHAPPMSST
RPDDDDGGLDVPKRIVSRPGASDALKDLQRASVTAGRELASSLRAMAEAE
KKGVRNSVKVPRASSVSQAQGELMMRSRIFRRWNLRYASIVHQGYFGAVL
LLFRPETKGVLGNIALRNSKMIALSETTVRRLESRKVNVPYMFEIRTSQR
TYTFGCKDADGREFWVNHLSLPGEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain