Ggra1367.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1367.t1
Unique NameGgra1367.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length275
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:388726..389550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1367Ggra1367Gracilaria gracilis GNS1m malegenetig00000092_pilon 388726..389550 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1367.t1.stop1Ggra1367.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 388726..388728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1367.t1.CDS1Ggra1367.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 388726..389550 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1367.t1.exon1Ggra1367.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 388726..389550 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1367.t1.start1Ggra1367.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 389548..389550 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1367.t1Ggra1367.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 388726..389550 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1367.t1 ID=Ggra1367.t1|Name=Ggra1367.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=275bp
MASSSTPPSPSLAVRYPLKLGRSIRKPATARSFVQLKFSHVGAAVDAHGA
GALHPARDGCSVALRARNHPAKCMWYACQRVRTLSAAANYVLLFSADAFW
LERVDDVFVSTRAGSLRAAVDVPPVAHDEFANEPDSWMHVGPDSGSPVTP
DGNDGEEEAAVRATSGGKSTPQLAVRKMAPPPSPPPPPRTLQRMQPLVPP
RPHAVKTVSHKTPSQRHARAQSDSDDDDDNDDDDDDDDELEDASSSDDDA
SSDDTDSSDSADSAEYTDRSSDED*
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spliced messenger RNA

>Ggra1367.t1 ID=Ggra1367.t1|Name=Ggra1367.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=825bp|location=Sequence derived from alignment at tig00000092_pilon:388726..389550- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTCCTCCTCAACGCCCCCCTCGCCCTCGCTCGCCGTGCGCTACCC
CCTCAAACTCGGCCGCTCCATCCGCAAACCCGCCACCGCGCGCTCCTTCG
TGCAGCTCAAGTTCTCGCACGTCGGCGCCGCCGTCGACGCCCATGGCGCG
GGCGCGCTGCACCCCGCGCGCGACGGCTGCTCCGTCGCGCTGCGCGCGCG
CAACCACCCCGCCAAGTGCATGTGGTACGCGTGCCAGCGCGTGCGCACCC
TCTCCGCCGCCGCCAATTACGTGCTGCTCTTCAGCGCCGACGCCTTCTGG
CTGGAGCGAGTGGACGACGTGTTCGTCTCCACGCGCGCCGGTTCGCTGCG
TGCGGCCGTCGACGTGCCGCCCGTTGCGCACGATGAGTTTGCAAACGAGC
CGGACAGCTGGATGCATGTGGGCCCCGATTCCGGCTCGCCCGTCACGCCG
GACGGCAACGACGGCGAGGAGGAGGCGGCGGTGCGCGCCACGTCGGGCGG
CAAATCAACGCCGCAGCTCGCGGTGAGAAAGATGGCGCCGCCGCCGTCGC
CGCCGCCGCCGCCGCGTACGTTGCAGCGCATGCAGCCGCTGGTGCCGCCG
CGACCGCACGCCGTCAAGACCGTCTCACATAAGACGCCTTCGCAACGCCA
CGCGCGTGCGCAAAGCGACTCGGACGACGACGACGACAACGACGACGACG
ACGACGACGACGACGAGCTTGAGGACGCTTCTTCGTCGGATGACGACGCT
AGTAGCGATGATACTGACTCGTCCGACTCGGCGGACTCGGCAGAGTACAC
CGATCGCAGCTCGGATGAGGATTAG
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protein sequence of Ggra1367.t1

>Ggra1367.t1 ID=Ggra1367.t1|Name=Ggra1367.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=275bp
MASSSTPPSPSLAVRYPLKLGRSIRKPATARSFVQLKFSHVGAAVDAHGA
GALHPARDGCSVALRARNHPAKCMWYACQRVRTLSAAANYVLLFSADAFW
LERVDDVFVSTRAGSLRAAVDVPPVAHDEFANEPDSWMHVGPDSGSPVTP
DGNDGEEEAAVRATSGGKSTPQLAVRKMAPPPSPPPPPRTLQRMQPLVPP
RPHAVKTVSHKTPSQRHARAQSDSDDDDDNDDDDDDDDELEDASSSDDDA
SSDDTDSSDSADSAEYTDRSSDED*
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mRNA from alignment at tig00000092_pilon:388726..389550-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1367.t1 ID=Ggra1367.t1|Name=Ggra1367.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=825bp|location=Sequence derived from alignment at tig00000092_pilon:388726..389550- (Gracilaria gracilis GNS1m male)
ATGGCCTCCTCCTCAACGCCCCCCTCGCCCTCGCTCGCCGTGCGCTACCC
CCTCAAACTCGGCCGCTCCATCCGCAAACCCGCCACCGCGCGCTCCTTCG
TGCAGCTCAAGTTCTCGCACGTCGGCGCCGCCGTCGACGCCCATGGCGCG
GGCGCGCTGCACCCCGCGCGCGACGGCTGCTCCGTCGCGCTGCGCGCGCG
CAACCACCCCGCCAAGTGCATGTGGTACGCGTGCCAGCGCGTGCGCACCC
TCTCCGCCGCCGCCAATTACGTGCTGCTCTTCAGCGCCGACGCCTTCTGG
CTGGAGCGAGTGGACGACGTGTTCGTCTCCACGCGCGCCGGTTCGCTGCG
TGCGGCCGTCGACGTGCCGCCCGTTGCGCACGATGAGTTTGCAAACGAGC
CGGACAGCTGGATGCATGTGGGCCCCGATTCCGGCTCGCCCGTCACGCCG
GACGGCAACGACGGCGAGGAGGAGGCGGCGGTGCGCGCCACGTCGGGCGG
CAAATCAACGCCGCAGCTCGCGGTGAGAAAGATGGCGCCGCCGCCGTCGC
CGCCGCCGCCGCCGCGTACGTTGCAGCGCATGCAGCCGCTGGTGCCGCCG
CGACCGCACGCCGTCAAGACCGTCTCACATAAGACGCCTTCGCAACGCCA
CGCGCGTGCGCAAAGCGACTCGGACGACGACGACGACAACGACGACGACG
ACGACGACGACGACGAGCTTGAGGACGCTTCTTCGTCGGATGACGACGCT
AGTAGCGATGATACTGACTCGTCCGACTCGGCGGACTCGGCAGAGTACAC
CGATCGCAGCTCGGATGAGGATTAG
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Coding sequence (CDS) from alignment at tig00000092_pilon:388726..389550-

>Ggra1367.t1 ID=Ggra1367.t1|Name=Ggra1367.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=825bp|location=Sequence derived from alignment at tig00000092_pilon:388726..389550- (Gracilaria gracilis GNS1m male)
ATGGCCTCCTCCTCAACGCCCCCCTCGCCCTCGCTCGCCGTGCGCTACCC
CCTCAAACTCGGCCGCTCCATCCGCAAACCCGCCACCGCGCGCTCCTTCG
TGCAGCTCAAGTTCTCGCACGTCGGCGCCGCCGTCGACGCCCATGGCGCG
GGCGCGCTGCACCCCGCGCGCGACGGCTGCTCCGTCGCGCTGCGCGCGCG
CAACCACCCCGCCAAGTGCATGTGGTACGCGTGCCAGCGCGTGCGCACCC
TCTCCGCCGCCGCCAATTACGTGCTGCTCTTCAGCGCCGACGCCTTCTGG
CTGGAGCGAGTGGACGACGTGTTCGTCTCCACGCGCGCCGGTTCGCTGCG
TGCGGCCGTCGACGTGCCGCCCGTTGCGCACGATGAGTTTGCAAACGAGC
CGGACAGCTGGATGCATGTGGGCCCCGATTCCGGCTCGCCCGTCACGCCG
GACGGCAACGACGGCGAGGAGGAGGCGGCGGTGCGCGCCACGTCGGGCGG
CAAATCAACGCCGCAGCTCGCGGTGAGAAAGATGGCGCCGCCGCCGTCGC
CGCCGCCGCCGCCGCGTACGTTGCAGCGCATGCAGCCGCTGGTGCCGCCG
CGACCGCACGCCGTCAAGACCGTCTCACATAAGACGCCTTCGCAACGCCA
CGCGCGTGCGCAAAGCGACTCGGACGACGACGACGACAACGACGACGACG
ACGACGACGACGACGAGCTTGAGGACGCTTCTTCGTCGGATGACGACGCT
AGTAGCGATGATACTGACTCGTCCGACTCGGCGGACTCGGCAGAGTACAC
CGATCGCAGCTCGGATGAGGATTAG
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