Ggra1359.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1359.t1
Unique NameGgra1359.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length291
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:359931..360803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1359Ggra1359Gracilaria gracilis GNS1m malegenetig00000092_pilon 359931..360803 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1.stop1Ggra1359.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 359931..359933 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1.CDS1Ggra1359.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 359931..360803 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1.exon1Ggra1359.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 359931..360803 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1.start1Ggra1359.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 360801..360803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1Ggra1359.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 359931..360803 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=291bp
MRPRSSSLSLALVPAFTFSMNVRPAERLLPLPLVQRRPPTATPLPTVQLP
TRVQLARIRFHLLNSRAREAADSERRSDDERRSDGERRSDMDRRRAYSAA
ERRVRSDRLKNLWNDPSWRERMMARRNDPEVLKKISEAAKANWKDPEFRE
RMRAARLGRPAANKGQPASKATRLRMSLARKGVPMSKETRKKISQSRLNR
AQDDDWPRLISQSKKGKTKEYFAMRREFRALHRDLMLWSDTYRTTYGRLP
SASTYERFVAPMMIFRIRRYLMLKEAIGDDEPQVRDIMSD*
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spliced messenger RNA

>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000092_pilon:359931..360803- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCCTCGCTCCTCTTCTCTATCGCTCGCTCTGGTGCCGGCCTTCAC
CTTCTCCATGAACGTTCGACCAGCCGAAAGACTCCTCCCATTGCCCCTGG
TACAACGGCGTCCGCCCACCGCAACGCCTCTGCCGACCGTGCAGCTGCCC
ACGCGCGTGCAATTGGCCCGCATTCGCTTCCATCTCCTCAACAGCCGCGC
GCGCGAAGCAGCAGATTCGGAACGACGCTCCGACGATGAGCGACGCTCTG
ATGGTGAACGCCGCTCAGACATGGACCGACGACGCGCGTATTCCGCGGCG
GAACGACGCGTGCGTAGTGATCGTTTGAAGAACTTGTGGAATGACCCATC
ATGGAGGGAACGAATGATGGCAAGACGAAATGATCCTGAGGTACTGAAGA
AGATCTCAGAAGCTGCCAAAGCCAATTGGAAGGATCCTGAATTCAGGGAA
CGTATGCGTGCGGCTAGGCTCGGGAGACCGGCCGCAAATAAGGGGCAACC
TGCGAGCAAGGCCACTAGACTTAGAATGAGTCTCGCTCGGAAGGGGGTGC
CCATGTCCAAGGAAACCAGGAAGAAAATTTCTCAATCGCGGCTTAATCGA
GCGCAGGATGATGACTGGCCGCGTCTGATTTCTCAGAGCAAGAAAGGAAA
GACCAAAGAGTACTTCGCCATGAGACGCGAATTTAGAGCTTTGCATCGAG
ATCTCATGCTATGGAGCGATACGTATAGAACAACGTATGGAAGATTACCT
AGCGCTTCGACGTACGAGAGATTTGTTGCTCCTATGATGATCTTTAGAAT
TAGGAGGTATTTGATGCTAAAGGAGGCTATTGGAGACGATGAGCCTCAAG
TAAGAGATATCATGTCAGACTAA
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protein sequence of Ggra1359.t1

>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=291bp
MRPRSSSLSLALVPAFTFSMNVRPAERLLPLPLVQRRPPTATPLPTVQLP
TRVQLARIRFHLLNSRAREAADSERRSDDERRSDGERRSDMDRRRAYSAA
ERRVRSDRLKNLWNDPSWRERMMARRNDPEVLKKISEAAKANWKDPEFRE
RMRAARLGRPAANKGQPASKATRLRMSLARKGVPMSKETRKKISQSRLNR
AQDDDWPRLISQSKKGKTKEYFAMRREFRALHRDLMLWSDTYRTTYGRLP
SASTYERFVAPMMIFRIRRYLMLKEAIGDDEPQVRDIMSD*
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mRNA from alignment at tig00000092_pilon:359931..360803-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000092_pilon:359931..360803- (Gracilaria gracilis GNS1m male)
ATGCGCCCTCGCTCCTCTTCTCTATCGCTCGCTCTGGTGCCGGCCTTCAC
CTTCTCCATGAACGTTCGACCAGCCGAAAGACTCCTCCCATTGCCCCTGG
TACAACGGCGTCCGCCCACCGCAACGCCTCTGCCGACCGTGCAGCTGCCC
ACGCGCGTGCAATTGGCCCGCATTCGCTTCCATCTCCTCAACAGCCGCGC
GCGCGAAGCAGCAGATTCGGAACGACGCTCCGACGATGAGCGACGCTCTG
ATGGTGAACGCCGCTCAGACATGGACCGACGACGCGCGTATTCCGCGGCG
GAACGACGCGTGCGTAGTGATCGTTTGAAGAACTTGTGGAATGACCCATC
ATGGAGGGAACGAATGATGGCAAGACGAAATGATCCTGAGGTACTGAAGA
AGATCTCAGAAGCTGCCAAAGCCAATTGGAAGGATCCTGAATTCAGGGAA
CGTATGCGTGCGGCTAGGCTCGGGAGACCGGCCGCAAATAAGGGGCAACC
TGCGAGCAAGGCCACTAGACTTAGAATGAGTCTCGCTCGGAAGGGGGTGC
CCATGTCCAAGGAAACCAGGAAGAAAATTTCTCAATCGCGGCTTAATCGA
GCGCAGGATGATGACTGGCCGCGTCTGATTTCTCAGAGCAAGAAAGGAAA
GACCAAAGAGTACTTCGCCATGAGACGCGAATTTAGAGCTTTGCATCGAG
ATCTCATGCTATGGAGCGATACGTATAGAACAACGTATGGAAGATTACCT
AGCGCTTCGACGTACGAGAGATTTGTTGCTCCTATGATGATCTTTAGAAT
TAGGAGGTATTTGATGCTAAAGGAGGCTATTGGAGACGATGAGCCTCAAG
TAAGAGATATCATGTCAGACTAA
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Coding sequence (CDS) from alignment at tig00000092_pilon:359931..360803-

>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=873bp|location=Sequence derived from alignment at tig00000092_pilon:359931..360803- (Gracilaria gracilis GNS1m male)
ATGCGCCCTCGCTCCTCTTCTCTATCGCTCGCTCTGGTGCCGGCCTTCAC
CTTCTCCATGAACGTTCGACCAGCCGAAAGACTCCTCCCATTGCCCCTGG
TACAACGGCGTCCGCCCACCGCAACGCCTCTGCCGACCGTGCAGCTGCCC
ACGCGCGTGCAATTGGCCCGCATTCGCTTCCATCTCCTCAACAGCCGCGC
GCGCGAAGCAGCAGATTCGGAACGACGCTCCGACGATGAGCGACGCTCTG
ATGGTGAACGCCGCTCAGACATGGACCGACGACGCGCGTATTCCGCGGCG
GAACGACGCGTGCGTAGTGATCGTTTGAAGAACTTGTGGAATGACCCATC
ATGGAGGGAACGAATGATGGCAAGACGAAATGATCCTGAGGTACTGAAGA
AGATCTCAGAAGCTGCCAAAGCCAATTGGAAGGATCCTGAATTCAGGGAA
CGTATGCGTGCGGCTAGGCTCGGGAGACCGGCCGCAAATAAGGGGCAACC
TGCGAGCAAGGCCACTAGACTTAGAATGAGTCTCGCTCGGAAGGGGGTGC
CCATGTCCAAGGAAACCAGGAAGAAAATTTCTCAATCGCGGCTTAATCGA
GCGCAGGATGATGACTGGCCGCGTCTGATTTCTCAGAGCAAGAAAGGAAA
GACCAAAGAGTACTTCGCCATGAGACGCGAATTTAGAGCTTTGCATCGAG
ATCTCATGCTATGGAGCGATACGTATAGAACAACGTATGGAAGATTACCT
AGCGCTTCGACGTACGAGAGATTTGTTGCTCCTATGATGATCTTTAGAAT
TAGGAGGTATTTGATGCTAAAGGAGGCTATTGGAGACGATGAGCCTCAAG
TAAGAGATATCATGTCAGACTAA
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