Ggra1359.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1359.t1
Unique NameGgra1359.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length291
Homology
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BLAST of Ggra1359.t1 vs. uniprot
Match: R7QKV0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKV0_CHOCR)

HSP 1 Score: 184 bits (466), Expect = 9.570e-53
Identity = 168/283 (59.36%), Postives = 200/283 (70.67%), Query Frame = 0 
Query:   14 PAFTFSMNVRPAERLLPLPLVQRRP-------PTATPLPTVQLP---TRVQLARIRFHLLNSRAREAADSERRSXXXXXXXXXXXXXXXXR-RAYSAAERRVRSDRLKNLWNDPSWRERMMARRNDPEVLKKISEAAKANXXXXXXXXXXXXARLGRPAANKGQPASKATRLRMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGKTKEYFAMRREFRALHRDLMLWSDTYRTTYGRLPSASTYERFVAPMMIFRIRRYLMLKEAIGDDEPQVR 285
            P   F+       R LP P V RRP        T + LP   LP   TR+QLAR+R HLL  R   A+          XXXXXXXXXX  R R YS  ERR RS+R++  W DP WR  M+A+R +P+VL +  E+A+  XXXXXXXX    ARLGRPA NKG   S +TRLRMS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGKT+EYF MR+EFRAL++DL LWSD+YRTT+GRLP A TYE  VAPMM+FRI+RYL+L++A+GDD+P+++
Sbjct:   32 PLQAFAPPFMSTARRLPNPPVARRPRNLLAYIATDSRLPDTDLPPAPTRIQLARLRRHLL--RMSSASPKPAGDLPNLXXXXXXXXXXGRRPRQYSEEERRARSERIRAKWQDPEWRAAMLAKRKEPDVLSRSRESARKXXXXXXXXXMQRAARLGRPAPNKGVSPSASTRLRMSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKTREYFQMRKEFRALYKDLKLWSDSYRTTHGRLPRAKTYESTVAPMMLFRIKRYLVLRDALGDDDPEIK 312
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BLAST of Ggra1359.t1 vs. uniprot
Match: A0A2V3J1S5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S5_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 3.760e-39
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0 
Query:  214 KKGKTKEYFAMRREFRALHRDLMLWSDTYRTTYGRLPSASTYERFVAPMMIFRIRRYLMLKEAIGDDEPQVRDIMSD 290
            KKGKTKEYFAM+REFRALH DLMLWSDTYR  +G+LPSA+TYERFVAPMMIFRI+RYLMLKEAIG+DEPQ RDI+SD
Sbjct:   41 KKGKTKEYFAMKREFRALHHDLMLWSDTYRAKHGKLPSAATYERFVAPMMIFRIKRYLMLKEAIGEDEPQARDIISD 117
The following BLAST results are available for this feature:
BLAST of Ggra1359.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QKV09.570e-5359.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J1S53.760e-3985.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003611Nuclease associated modular domain 3SMARTSM00496seet_6coord: 181..197
e-value: 1.1
score: 18.3
coord: 164..180
e-value: 140.0
score: 7.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:359931..360803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1359.t1Ggra1359.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 359931..360803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1359.t1 ID=Ggra1359.t1|Name=Ggra1359.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=291bp
MRPRSSSLSLALVPAFTFSMNVRPAERLLPLPLVQRRPPTATPLPTVQLP
TRVQLARIRFHLLNSRAREAADSERRSDDERRSDGERRSDMDRRRAYSAA
ERRVRSDRLKNLWNDPSWRERMMARRNDPEVLKKISEAAKANWKDPEFRE
RMRAARLGRPAANKGQPASKATRLRMSLARKGVPMSKETRKKISQSRLNR
AQDDDWPRLISQSKKGKTKEYFAMRREFRALHRDLMLWSDTYRTTYGRLP
SASTYERFVAPMMIFRIRRYLMLKEAIGDDEPQVRDIMSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3