Ggra1266.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1266.t1
Unique NameGgra1266.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length291
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000208_piloncontigtig00000208_pilon:129092..129964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1266Ggra1266Gracilaria gracilis GNS1m malegenetig00000208_pilon 129092..129964 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1266.t1.start1Ggra1266.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000208_pilon 129092..129094 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1266.t1.CDS1Ggra1266.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000208_pilon 129092..129964 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1266.t1.exon1Ggra1266.t1.exon1Gracilaria gracilis GNS1m maleexontig00000208_pilon 129092..129964 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1266.t1.stop1Ggra1266.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000208_pilon 129962..129964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1266.t1Ggra1266.t1Gracilaria gracilis GNS1m malepolypeptidetig00000208_pilon 129092..129964 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1266.t1 ID=Ggra1266.t1|Name=Ggra1266.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=291bp
MEELERTAVPRRRKKTGEETHSQDDLNDGVDGIEPELMETVDESCGTGNT
RRTAPRKGGSTYGVRRDPSIQRRMHAMSQLMQTYRENNSPAPISSSEEGN
GTMSSSCSSQDEQSNENHNGVATISEMKRSSHKMKGKQLLTDITNIVSDE
GMFSQWNLGEGDEMFGSGIGGNLEELYSGSNRMVRACHERDDDDVYENDD
EESAGREVKRQKRARESCTVSSGSPIDMLNDVDTTTADAAAAELDRDAAA
GDAMEVAVADSGAPRAIAAPRDVKVSGMSRSRKRMFGKYN*
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spliced messenger RNA

>Ggra1266.t1 ID=Ggra1266.t1|Name=Ggra1266.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000208_pilon:129092..129964+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGAGTTGGAGCGGACCGCTGTGCCACGACGGCGCAAGAAGACAGG
AGAAGAGACGCACTCGCAAGATGACCTCAACGACGGCGTTGATGGGATTG
AGCCAGAACTGATGGAAACCGTTGATGAGAGTTGCGGGACCGGGAACACG
AGGAGAACGGCACCGAGAAAGGGAGGGAGCACATATGGTGTGAGAAGAGA
TCCCTCAATACAACGAAGAATGCATGCGATGAGCCAGTTGATGCAAACCT
ACCGCGAGAACAACAGCCCTGCTCCTATTTCATCATCCGAAGAGGGAAAT
GGTACCATGTCCTCTTCGTGTTCTTCCCAAGATGAGCAAAGCAACGAAAA
CCACAATGGTGTTGCCACCATTTCCGAAATGAAACGGAGCAGTCATAAGA
TGAAGGGGAAGCAGTTATTGACTGATATAACCAATATCGTGTCCGATGAA
GGGATGTTTTCGCAATGGAATCTTGGAGAAGGGGATGAAATGTTTGGAAG
TGGGATTGGCGGGAATTTGGAAGAGCTGTACTCTGGTTCCAATCGCATGG
TGCGCGCATGTCATGAGCGtgatgatgatgatgtttatgagaatgatgat
gaagaATCCGCTGGGCGTGAAGTGAAGCGGCAGAAAAGGGCCAGAGAAAG
TTGCACAGTTTCGAGCGGGAGCCCTATTGACATGCTCAACGACGTTGACA
CGACAACAGCTGATGCCGCTGCAGCGGAACTGGACCGTGACGCGGCCGCC
GGAGATGCAATGGAAGTGGCTGTGGCTGATTCGGGTGCGCCTAGAGCCAT
TGCAGCTCCTCGTGATGTGAAAGTGAGTGGTATGAGCAGAAGCCGGAAGA
GAATGTTTGGAAAATACAATTGA
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protein sequence of Ggra1266.t1

>Ggra1266.t1 ID=Ggra1266.t1|Name=Ggra1266.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=291bp
MEELERTAVPRRRKKTGEETHSQDDLNDGVDGIEPELMETVDESCGTGNT
RRTAPRKGGSTYGVRRDPSIQRRMHAMSQLMQTYRENNSPAPISSSEEGN
GTMSSSCSSQDEQSNENHNGVATISEMKRSSHKMKGKQLLTDITNIVSDE
GMFSQWNLGEGDEMFGSGIGGNLEELYSGSNRMVRACHERDDDDVYENDD
EESAGREVKRQKRARESCTVSSGSPIDMLNDVDTTTADAAAAELDRDAAA
GDAMEVAVADSGAPRAIAAPRDVKVSGMSRSRKRMFGKYN*
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mRNA from alignment at tig00000208_pilon:129092..129964+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1266.t1 ID=Ggra1266.t1|Name=Ggra1266.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000208_pilon:129092..129964+ (Gracilaria gracilis GNS1m male)
ATGGAGGAGTTGGAGCGGACCGCTGTGCCACGACGGCGCAAGAAGACAGG
AGAAGAGACGCACTCGCAAGATGACCTCAACGACGGCGTTGATGGGATTG
AGCCAGAACTGATGGAAACCGTTGATGAGAGTTGCGGGACCGGGAACACG
AGGAGAACGGCACCGAGAAAGGGAGGGAGCACATATGGTGTGAGAAGAGA
TCCCTCAATACAACGAAGAATGCATGCGATGAGCCAGTTGATGCAAACCT
ACCGCGAGAACAACAGCCCTGCTCCTATTTCATCATCCGAAGAGGGAAAT
GGTACCATGTCCTCTTCGTGTTCTTCCCAAGATGAGCAAAGCAACGAAAA
CCACAATGGTGTTGCCACCATTTCCGAAATGAAACGGAGCAGTCATAAGA
TGAAGGGGAAGCAGTTATTGACTGATATAACCAATATCGTGTCCGATGAA
GGGATGTTTTCGCAATGGAATCTTGGAGAAGGGGATGAAATGTTTGGAAG
TGGGATTGGCGGGAATTTGGAAGAGCTGTACTCTGGTTCCAATCGCATGG
TGCGCGCATGTCATGAGCGtgatgatgatgatgtttatgagaatgatgat
gaagaATCCGCTGGGCGTGAAGTGAAGCGGCAGAAAAGGGCCAGAGAAAG
TTGCACAGTTTCGAGCGGGAGCCCTATTGACATGCTCAACGACGTTGACA
CGACAACAGCTGATGCCGCTGCAGCGGAACTGGACCGTGACGCGGCCGCC
GGAGATGCAATGGAAGTGGCTGTGGCTGATTCGGGTGCGCCTAGAGCCAT
TGCAGCTCCTCGTGATGTGAAAGTGAGTGGTATGAGCAGAAGCCGGAAGA
GAATGTTTGGAAAATACAATTGA
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Coding sequence (CDS) from alignment at tig00000208_pilon:129092..129964+

>Ggra1266.t1 ID=Ggra1266.t1|Name=Ggra1266.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=873bp|location=Sequence derived from alignment at tig00000208_pilon:129092..129964+ (Gracilaria gracilis GNS1m male)
ATGGAGGAGTTGGAGCGGACCGCTGTGCCACGACGGCGCAAGAAGACAGG
AGAAGAGACGCACTCGCAAGATGACCTCAACGACGGCGTTGATGGGATTG
AGCCAGAACTGATGGAAACCGTTGATGAGAGTTGCGGGACCGGGAACACG
AGGAGAACGGCACCGAGAAAGGGAGGGAGCACATATGGTGTGAGAAGAGA
TCCCTCAATACAACGAAGAATGCATGCGATGAGCCAGTTGATGCAAACCT
ACCGCGAGAACAACAGCCCTGCTCCTATTTCATCATCCGAAGAGGGAAAT
GGTACCATGTCCTCTTCGTGTTCTTCCCAAGATGAGCAAAGCAACGAAAA
CCACAATGGTGTTGCCACCATTTCCGAAATGAAACGGAGCAGTCATAAGA
TGAAGGGGAAGCAGTTATTGACTGATATAACCAATATCGTGTCCGATGAA
GGGATGTTTTCGCAATGGAATCTTGGAGAAGGGGATGAAATGTTTGGAAG
TGGGATTGGCGGGAATTTGGAAGAGCTGTACTCTGGTTCCAATCGCATGG
TGCGCGCATGTCATGAGCGtgatgatgatgatgtttatgagaatgatgat
gaagaATCCGCTGGGCGTGAAGTGAAGCGGCAGAAAAGGGCCAGAGAAAG
TTGCACAGTTTCGAGCGGGAGCCCTATTGACATGCTCAACGACGTTGACA
CGACAACAGCTGATGCCGCTGCAGCGGAACTGGACCGTGACGCGGCCGCC
GGAGATGCAATGGAAGTGGCTGTGGCTGATTCGGGTGCGCCTAGAGCCAT
TGCAGCTCCTCGTGATGTGAAAGTGAGTGGTATGAGCAGAAGCCGGAAGA
GAATGTTTGGAAAATACAATTGA
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