Ggra11147.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11147.t1
Unique NameGgra11147.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length176
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000180_piloncontigtig00000180_pilon:232851..233378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11147Ggra11147Gracilaria gracilis GNS1m malegenetig00000180_pilon 232851..233378 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11147.t1.stop1Ggra11147.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000180_pilon 232851..232853 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11147.t1.CDS1Ggra11147.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000180_pilon 232851..233378 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11147.t1.exon1Ggra11147.t1.exon1Gracilaria gracilis GNS1m maleexontig00000180_pilon 232851..233378 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11147.t1.start1Ggra11147.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000180_pilon 233376..233378 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11147.t1Ggra11147.t1Gracilaria gracilis GNS1m malepolypeptidetig00000180_pilon 232851..233378 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11147.t1 ID=Ggra11147.t1|Name=Ggra11147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=176bp
MRVRDISSRRTRPKSPQNARSEKALNKTGMDANQNRTMDQEIVDSGKNFA
SRVESRYEIEHSDKADTGNLSSDEDSTKITANQDKLHEVERISHQTKVLR
KKGKVSKPSKAREPLSSFEVGDLKDIISFVRHRKRNGDAEPFPGGEKLNT
AVLQSGSIERSRNATNHKTKRVKTG*
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spliced messenger RNA

>Ggra11147.t1 ID=Ggra11147.t1|Name=Ggra11147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=528bp|location=Sequence derived from alignment at tig00000180_pilon:232851..233378- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGAGTTCGAGATATTTCATCTCGACGTACGAGACCTAAGAGTCCTCA
AAATGCCAGAAGTGAGAAAGCCTTGAACAAGACAGGAATGGACGCAAACC
AGAATCGTACTATGGATCAGGAGATAGTGGATAGCGGCAAAAACTTCGCA
AGCAGAGTTGAGTCCCGTTATGAAATTGAACATAGCGATAAAGCGGATAC
AGGAAATTTGAGCTCTGATGAAGACTCCACAAAGATCACTGCGAATCAAG
ATAAATTGCATGAAGTTGAACGAATCAGCCACCAAACTAAGGTGCTGCGT
AAGAAAGGTAAAGTTTCAAAACCGTCGAAGGCAAGGGAACCACTTTCATC
ATTTGAAGTGGGGGACTTGAAAGATATCATCTCCTTCGTTCGGCATAGAA
AGAGGAATGGCGATGCGGAGCCATTTCCAGGCGGAGAAAAACTTAACACT
GCCGTTCTGCAAAGCGGAAGCATCGAAAGGTCTCGCAACGCAACCAACCA
CAAAACTAAGAGAGTCAAAACAGGATAA
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protein sequence of Ggra11147.t1

>Ggra11147.t1 ID=Ggra11147.t1|Name=Ggra11147.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MRVRDISSRRTRPKSPQNARSEKALNKTGMDANQNRTMDQEIVDSGKNFA
SRVESRYEIEHSDKADTGNLSSDEDSTKITANQDKLHEVERISHQTKVLR
KKGKVSKPSKAREPLSSFEVGDLKDIISFVRHRKRNGDAEPFPGGEKLNT
AVLQSGSIERSRNATNHKTKRVKTG*
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mRNA from alignment at tig00000180_pilon:232851..233378-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11147.t1 ID=Ggra11147.t1|Name=Ggra11147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=528bp|location=Sequence derived from alignment at tig00000180_pilon:232851..233378- (Gracilaria gracilis GNS1m male)
ATGAGAGTTCGAGATATTTCATCTCGACGTACGAGACCTAAGAGTCCTCA
AAATGCCAGAAGTGAGAAAGCCTTGAACAAGACAGGAATGGACGCAAACC
AGAATCGTACTATGGATCAGGAGATAGTGGATAGCGGCAAAAACTTCGCA
AGCAGAGTTGAGTCCCGTTATGAAATTGAACATAGCGATAAAGCGGATAC
AGGAAATTTGAGCTCTGATGAAGACTCCACAAAGATCACTGCGAATCAAG
ATAAATTGCATGAAGTTGAACGAATCAGCCACCAAACTAAGGTGCTGCGT
AAGAAAGGTAAAGTTTCAAAACCGTCGAAGGCAAGGGAACCACTTTCATC
ATTTGAAGTGGGGGACTTGAAAGATATCATCTCCTTCGTTCGGCATAGAA
AGAGGAATGGCGATGCGGAGCCATTTCCAGGCGGAGAAAAACTTAACACT
GCCGTTCTGCAAAGCGGAAGCATCGAAAGGTCTCGCAACGCAACCAACCA
CAAAACTAAGAGAGTCAAAACAGGATAA
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Coding sequence (CDS) from alignment at tig00000180_pilon:232851..233378-

>Ggra11147.t1 ID=Ggra11147.t1|Name=Ggra11147.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=528bp|location=Sequence derived from alignment at tig00000180_pilon:232851..233378- (Gracilaria gracilis GNS1m male)
ATGAGAGTTCGAGATATTTCATCTCGACGTACGAGACCTAAGAGTCCTCA
AAATGCCAGAAGTGAGAAAGCCTTGAACAAGACAGGAATGGACGCAAACC
AGAATCGTACTATGGATCAGGAGATAGTGGATAGCGGCAAAAACTTCGCA
AGCAGAGTTGAGTCCCGTTATGAAATTGAACATAGCGATAAAGCGGATAC
AGGAAATTTGAGCTCTGATGAAGACTCCACAAAGATCACTGCGAATCAAG
ATAAATTGCATGAAGTTGAACGAATCAGCCACCAAACTAAGGTGCTGCGT
AAGAAAGGTAAAGTTTCAAAACCGTCGAAGGCAAGGGAACCACTTTCATC
ATTTGAAGTGGGGGACTTGAAAGATATCATCTCCTTCGTTCGGCATAGAA
AGAGGAATGGCGATGCGGAGCCATTTCCAGGCGGAGAAAAACTTAACACT
GCCGTTCTGCAAAGCGGAAGCATCGAAAGGTCTCGCAACGCAACCAACCA
CAAAACTAAGAGAGTCAAAACAGGATAA
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