Ggra11134.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11134.t1
Unique NameGgra11134.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:99381..100808 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11134Ggra11134Gracilaria gracilis GNS1m malegenetig00000110_pilon 99381..100808 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11134.t1.stop1Ggra11134.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000110_pilon 99381..99383 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11134.t1.CDS1Ggra11134.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000110_pilon 99381..100808 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11134.t1.exon1Ggra11134.t1.exon1Gracilaria gracilis GNS1m maleexontig00000110_pilon 99381..100808 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11134.t1.start1Ggra11134.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000110_pilon 100806..100808 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11134.t1Ggra11134.t1Gracilaria gracilis GNS1m malepolypeptidetig00000110_pilon 99381..100808 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11134.t1 ID=Ggra11134.t1|Name=Ggra11134.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=476bp
MRYPRASLKLFQTIGDGQDIPLVSRISNDSCVLIAALESGVVDVYTRPFY
AAKFEKSEVSYTTHQRKKCQVTALALQDGGAQAASGDDLGYLHVWLTSDP
TKYTSRQCGYGPIADVAISSHYLLVCFKATAEKDGCMVLFKKGLNIMDDW
EEVKVYEPGKYSKCALSEKLKLKELNLVYYHNKNLIYEKNPHDADEQPFD
ALEYMKPFSVSRNAACLKTLVFAALVERRLMLWDPRHPVVEYKNPFFFRL
KSSDRVALNKTSSASSVCDGRMFIVTVFENKLCLVTLDRGSDPKSDAPAK
GEEKNTVTTPTVFKAVQELVSGNPEPVNTLMAVIDGDETGTELISKAGTA
VIEEETTEIVSEPQRKSTNEDSSNTSQVVSTKDLIGVSKAGQVSEDENGI
SKIASPTQTQEDILGTETMEEGLSTPNFEGREMSVPHDPQSEDGRDDVIV
TDGEDEEEEVLEDPEGMAHEFWGLF*
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spliced messenger RNA

>Ggra11134.t1 ID=Ggra11134.t1|Name=Ggra11134.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000110_pilon:99381..100808- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTTACCCTCGTGCAAGCCTCAAGCTTTTTCAAACAATCGGAGACGG
GCAAGATATTCCGCTCGTCTCGAGAATATCGAATGACTCATGTGTGCTCA
TCGCTGCTCTGGAAAGCGGTGTCGTCGATGTGTACACCCGCCCTTTCTAC
GCAGCCAAATTTGAGAAGTCCGAAGTTTCCTACACAACGCATCAACGAAA
GAAATGTCAAGTGACCGCCCTCGCTCTTCAAGACGGAGGTGCTCAGGCCG
CGTCTGGTGATGACCTAGGCTATCTCCATGTTTGGTTGACAAGTGATCCA
ACGAAGTACACTTCCAGGCAGTGCGGCTATGGTCCAATTGCGGACGTGGC
GATTAGCAGCCACTACTTGTTGGTGTGCTTCAAAGCAACCGCTGAAAAGG
ATGGTTGTATGGTTTTGTTTAAGAAAGGTCTTAATATAATGGATGACTGG
GAAGAAGTCAAGGTGTACGAGCCTGGCAAATATTCGAAGTGCGCTTTATC
GGAGAAACTAAAGCTCAAAGAGCTCAACTTGGTTTATTACCACAACAAGA
ATCTTATCTACGAGAAGAATCCGCACGACGCGGATGAGCAGCCGTTTGAT
GCATTGGAATACATGAAACCATTTTCTGTGTCTCGTAATGCAGCATGCCT
GAAAACACTGGTGTTTGCAGCTTTGGTTGAGCGTCGCCTGATGCTTTGGG
ATCCAAGGCACCCCGTGGTCGAGTACAAAAACCCTTTCTTCTTTCGGTTG
AAATCGTCTGATAGGGTTGCCCTGAACAAGACATCATCCGCATCTTCTGT
CTGTGACGGTCGTATGTTTATTGTCACTGTTTTCGAGAACAAGTTATGTC
TGGTTACTCTCGACCGGGGGAGTGATCCGAAGTCCGATGCGCCAGCGAAG
GGTGAAGAAAAGAACACCGTGACTACGCCCACGGTCTTTAAGGCAGTGCA
AGAACTAGTAAGTGGAAATCCAGAACCTGTGAACACCCTGATGGCAGTAA
TCGACGGTGACGAAACTGGGACTGAACTTATTTCTAAGGCAGGGACAGCA
GTCATCGAAGAGGAAACTACAGAAATAGTTTCCGAGCCTCAAAGAAAGTC
TACGAACGAAGATAGTTCAAACACCTCGCAAGTTGTCTCTACCAAAGATT
TAATTGGTGTTTCTAAAGCTGGGCAGGTCAGTGAGGACGAAAACGGTATC
TCTAAGATAGCATCCCCGACCCAAACGCAGGAAGATATCTTGGGAACCGA
AACCATGGAAGAAGGCCTTTCTACCCCGAATTTCGAAGGTAGGGAAATGT
CTGTCCCGCACGACCCACAAAGCGAAGACGGTCGGGATGATGTAATAGTC
ACTGACGGAGAAGATGAAGAAGAGGAAGTGTTGGAGGATCCAGAAGGGAT
GGCTCATGAATTCTGGGGTTTGTTCTAA
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protein sequence of Ggra11134.t1

>Ggra11134.t1 ID=Ggra11134.t1|Name=Ggra11134.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MRYPRASLKLFQTIGDGQDIPLVSRISNDSCVLIAALESGVVDVYTRPFY
AAKFEKSEVSYTTHQRKKCQVTALALQDGGAQAASGDDLGYLHVWLTSDP
TKYTSRQCGYGPIADVAISSHYLLVCFKATAEKDGCMVLFKKGLNIMDDW
EEVKVYEPGKYSKCALSEKLKLKELNLVYYHNKNLIYEKNPHDADEQPFD
ALEYMKPFSVSRNAACLKTLVFAALVERRLMLWDPRHPVVEYKNPFFFRL
KSSDRVALNKTSSASSVCDGRMFIVTVFENKLCLVTLDRGSDPKSDAPAK
GEEKNTVTTPTVFKAVQELVSGNPEPVNTLMAVIDGDETGTELISKAGTA
VIEEETTEIVSEPQRKSTNEDSSNTSQVVSTKDLIGVSKAGQVSEDENGI
SKIASPTQTQEDILGTETMEEGLSTPNFEGREMSVPHDPQSEDGRDDVIV
TDGEDEEEEVLEDPEGMAHEFWGLF*
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mRNA from alignment at tig00000110_pilon:99381..100808-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11134.t1 ID=Ggra11134.t1|Name=Ggra11134.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000110_pilon:99381..100808- (Gracilaria gracilis GNS1m male)
ATGCGTTACCCTCGTGCAAGCCTCAAGCTTTTTCAAACAATCGGAGACGG
GCAAGATATTCCGCTCGTCTCGAGAATATCGAATGACTCATGTGTGCTCA
TCGCTGCTCTGGAAAGCGGTGTCGTCGATGTGTACACCCGCCCTTTCTAC
GCAGCCAAATTTGAGAAGTCCGAAGTTTCCTACACAACGCATCAACGAAA
GAAATGTCAAGTGACCGCCCTCGCTCTTCAAGACGGAGGTGCTCAGGCCG
CGTCTGGTGATGACCTAGGCTATCTCCATGTTTGGTTGACAAGTGATCCA
ACGAAGTACACTTCCAGGCAGTGCGGCTATGGTCCAATTGCGGACGTGGC
GATTAGCAGCCACTACTTGTTGGTGTGCTTCAAAGCAACCGCTGAAAAGG
ATGGTTGTATGGTTTTGTTTAAGAAAGGTCTTAATATAATGGATGACTGG
GAAGAAGTCAAGGTGTACGAGCCTGGCAAATATTCGAAGTGCGCTTTATC
GGAGAAACTAAAGCTCAAAGAGCTCAACTTGGTTTATTACCACAACAAGA
ATCTTATCTACGAGAAGAATCCGCACGACGCGGATGAGCAGCCGTTTGAT
GCATTGGAATACATGAAACCATTTTCTGTGTCTCGTAATGCAGCATGCCT
GAAAACACTGGTGTTTGCAGCTTTGGTTGAGCGTCGCCTGATGCTTTGGG
ATCCAAGGCACCCCGTGGTCGAGTACAAAAACCCTTTCTTCTTTCGGTTG
AAATCGTCTGATAGGGTTGCCCTGAACAAGACATCATCCGCATCTTCTGT
CTGTGACGGTCGTATGTTTATTGTCACTGTTTTCGAGAACAAGTTATGTC
TGGTTACTCTCGACCGGGGGAGTGATCCGAAGTCCGATGCGCCAGCGAAG
GGTGAAGAAAAGAACACCGTGACTACGCCCACGGTCTTTAAGGCAGTGCA
AGAACTAGTAAGTGGAAATCCAGAACCTGTGAACACCCTGATGGCAGTAA
TCGACGGTGACGAAACTGGGACTGAACTTATTTCTAAGGCAGGGACAGCA
GTCATCGAAGAGGAAACTACAGAAATAGTTTCCGAGCCTCAAAGAAAGTC
TACGAACGAAGATAGTTCAAACACCTCGCAAGTTGTCTCTACCAAAGATT
TAATTGGTGTTTCTAAAGCTGGGCAGGTCAGTGAGGACGAAAACGGTATC
TCTAAGATAGCATCCCCGACCCAAACGCAGGAAGATATCTTGGGAACCGA
AACCATGGAAGAAGGCCTTTCTACCCCGAATTTCGAAGGTAGGGAAATGT
CTGTCCCGCACGACCCACAAAGCGAAGACGGTCGGGATGATGTAATAGTC
ACTGACGGAGAAGATGAAGAAGAGGAAGTGTTGGAGGATCCAGAAGGGAT
GGCTCATGAATTCTGGGGTTTGTTCTAA
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Coding sequence (CDS) from alignment at tig00000110_pilon:99381..100808-

>Ggra11134.t1 ID=Ggra11134.t1|Name=Ggra11134.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1428bp|location=Sequence derived from alignment at tig00000110_pilon:99381..100808- (Gracilaria gracilis GNS1m male)
ATGCGTTACCCTCGTGCAAGCCTCAAGCTTTTTCAAACAATCGGAGACGG
GCAAGATATTCCGCTCGTCTCGAGAATATCGAATGACTCATGTGTGCTCA
TCGCTGCTCTGGAAAGCGGTGTCGTCGATGTGTACACCCGCCCTTTCTAC
GCAGCCAAATTTGAGAAGTCCGAAGTTTCCTACACAACGCATCAACGAAA
GAAATGTCAAGTGACCGCCCTCGCTCTTCAAGACGGAGGTGCTCAGGCCG
CGTCTGGTGATGACCTAGGCTATCTCCATGTTTGGTTGACAAGTGATCCA
ACGAAGTACACTTCCAGGCAGTGCGGCTATGGTCCAATTGCGGACGTGGC
GATTAGCAGCCACTACTTGTTGGTGTGCTTCAAAGCAACCGCTGAAAAGG
ATGGTTGTATGGTTTTGTTTAAGAAAGGTCTTAATATAATGGATGACTGG
GAAGAAGTCAAGGTGTACGAGCCTGGCAAATATTCGAAGTGCGCTTTATC
GGAGAAACTAAAGCTCAAAGAGCTCAACTTGGTTTATTACCACAACAAGA
ATCTTATCTACGAGAAGAATCCGCACGACGCGGATGAGCAGCCGTTTGAT
GCATTGGAATACATGAAACCATTTTCTGTGTCTCGTAATGCAGCATGCCT
GAAAACACTGGTGTTTGCAGCTTTGGTTGAGCGTCGCCTGATGCTTTGGG
ATCCAAGGCACCCCGTGGTCGAGTACAAAAACCCTTTCTTCTTTCGGTTG
AAATCGTCTGATAGGGTTGCCCTGAACAAGACATCATCCGCATCTTCTGT
CTGTGACGGTCGTATGTTTATTGTCACTGTTTTCGAGAACAAGTTATGTC
TGGTTACTCTCGACCGGGGGAGTGATCCGAAGTCCGATGCGCCAGCGAAG
GGTGAAGAAAAGAACACCGTGACTACGCCCACGGTCTTTAAGGCAGTGCA
AGAACTAGTAAGTGGAAATCCAGAACCTGTGAACACCCTGATGGCAGTAA
TCGACGGTGACGAAACTGGGACTGAACTTATTTCTAAGGCAGGGACAGCA
GTCATCGAAGAGGAAACTACAGAAATAGTTTCCGAGCCTCAAAGAAAGTC
TACGAACGAAGATAGTTCAAACACCTCGCAAGTTGTCTCTACCAAAGATT
TAATTGGTGTTTCTAAAGCTGGGCAGGTCAGTGAGGACGAAAACGGTATC
TCTAAGATAGCATCCCCGACCCAAACGCAGGAAGATATCTTGGGAACCGA
AACCATGGAAGAAGGCCTTTCTACCCCGAATTTCGAAGGTAGGGAAATGT
CTGTCCCGCACGACCCACAAAGCGAAGACGGTCGGGATGATGTAATAGTC
ACTGACGGAGAAGATGAAGAAGAGGAAGTGTTGGAGGATCCAGAAGGGAT
GGCTCATGAATTCTGGGGTTTGTTCTAA
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