Ggra11061.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11061.t1
Unique NameGgra11061.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length533
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:14842..16440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11061Ggra11061Gracilaria gracilis GNS1m malegenetig00000207_pilon 14842..16440 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11061.t1.stop1Ggra11061.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000207_pilon 14842..14844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11061.t1.CDS1Ggra11061.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000207_pilon 14842..16440 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11061.t1.exon1Ggra11061.t1.exon1Gracilaria gracilis GNS1m maleexontig00000207_pilon 14842..16440 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11061.t1.start1Ggra11061.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000207_pilon 16438..16440 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11061.t1Ggra11061.t1Gracilaria gracilis GNS1m malepolypeptidetig00000207_pilon 14842..16440 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11061.t1 ID=Ggra11061.t1|Name=Ggra11061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=533bp
MADDDPPKLFTRAVHFGGCVIHRPLYFYVGLNKLGRIPVERLIVQHGGRT
VSQPKAADNQIIPLIDPLSRSDVEGPLAYSVHFVNDCIDAGNLLDLDRYR
IPHRYQRVANGAPSQPLLQSDAKKTEPVTPPLTPRGKRDKQPRVDREEQP
HLQQTTSPRRTRRTSTPVSKPKEKRKLKIYVDHYEGEVLERTPLPKQARR
ITTPNATPQQQRKAPAEVEPEDEEQSLRTPPPRRTRKRTTPTTMSQHKRE
TLRPEQEEQAQPQRTPLPRCARKTAPCARKTAPRISTNQRKRQTTQTAQE
EEEPQPVSFPRRAVLERATKVTAGHEREAEILVEEMSPPSPSERWTLDED
NQLRAVCEDVLTRLRKERVASSRLFHIDMWKALKNKDRLPSTRSAAQCRQ
RAMHLRHPEQTQRETGQHVAKGENKEELDRKRRQVRDEEDYDDEIQPVYK
ERRPAKVQRVANPEQQTQSNQRPRSRSKQFIRRMVRSLSYETQMTQRRVF
QVLRAHSCDRARTRSALLRERRDSETQKRNRR*
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spliced messenger RNA

>Ggra11061.t1 ID=Ggra11061.t1|Name=Ggra11061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1599bp|location=Sequence derived from alignment at tig00000207_pilon:14842..16440- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGACGACGATCCCCCAAAGCTTTTCACCAGGGCCGTTCACTTTGG
CGGATGCGTAATTCATCGTCCGCTCTACTTTTACGTCGGGCTCAACAAGC
TCGGTCGCATACCTGTCGAGCGTCTCATCGTGCAGCACGGCGGACGTACA
GTCTCTCAGCCAAAAGCTGCTGACAATCAAATCATCCCCCTGATTGATCC
CTTGTCAAGGTCAGATGTTGAAGGCCCGCTTGCGTACTCTGTACACTTTG
TCAACGACTGCATTGATGCCGGGAATTTGCTCGACTTAGATCGATATCGA
ATTCCTCACCGCTATCAACGTGTCGCCAATGGCGCACCTTCTCAGCCTCT
TCTACAGAGCGATGCGAAGAAAACGGAACCCGTCACCCCACCCCTCACGC
CTCGAGGCAAACGCGATAAACAACCACGAGTAGACCGCGAAGAGCAACCA
CACCTACAACAAACAACCTCACCCAGACGCACCAGGAGAACCAGTACCCC
CGTCTCAAAGCCTAAAGAGAAACGCAAATTGAAAATATATGTAGACCATT
ATGAAGGAGAAGTACTAGAGCGGACACCACTTCCCAAGCAGGCAAGGAGA
ATAACTACTCCGAATGCCACCCCCCAACAACAACGCAAAGCACCAGCGGA
GGTAGAACCGGAAGATGAAGAACAATCGCTACGAACACCGCCTCCTAGAC
GCACGAGGAAGAGAACTACTCCAACAACCATGTCTCAGCACAAACGCGAA
ACACTGCGACCAGAACAGGAGGAACAAGCACAACCACAGCGAACACCGCT
TCCCCGATGCGCAAGGAAAACCGCCCCATGCGCAAGGAAAACTGCTCCCC
GAATCTCCACGAATCAACGAAAACGCCAAACAACACAAACAGCACAAGAA
GAAGAAGAACCGCAACCGGTTTCGTTTCCCAGACGCGCTGTTCTAGAACG
AGCAACCAAAGTAACAGCTGGACACGAACGGGAAGCAGAAATACTTGTTG
AAGAGATGTCTCCTCCATCACCCTCAGAGCGGTGGACTCTCGATGAGGAC
AACCAGCTCCGTGCAGTCTGTGAAGACGTCCTGACACGGCTTCGCAAGGA
GAGAGTTGCCTCATCCCGGTTGTTTCATATCGACATGTGGAAAGCGTTAA
AGAACAAGGATAGATTACCATCCACTCGGAGTGCGGCGCAATGCAGGCAA
CGAGCCATGCATTTGCGACATCCCGAACAGACGCAGCGTGAGACAGGTCA
ACATGTTGCAAAGGGAGAGAACAAGGAGGAGTTAGACCGAAAACGCCGCC
AAGTGCGTGATGAAGAAGACTACGATGACGAAATACAACCGGTTTATAAG
GAGCGTCGGCCCGCAAAGGTGCAACGCGTGGCCAATCCTGAGCAACAGAC
GCAAAGCAATCAAAGACCACGATCACGGTCAAAACAGTTTATTCGAAGAA
TGGTTCGTTCACTCTCATACGAGACACAGATGACTCAACGACGAGTATTT
CAGGTACTGCGGGCACATTCTTGCGATCGAGCCAGAACCAGATCTGCGCT
GCTGAGAGAACGTCGTGACAGTGAAACCCAAAAACGAAACCGCAGATAA
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protein sequence of Ggra11061.t1

>Ggra11061.t1 ID=Ggra11061.t1|Name=Ggra11061.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=533bp
MADDDPPKLFTRAVHFGGCVIHRPLYFYVGLNKLGRIPVERLIVQHGGRT
VSQPKAADNQIIPLIDPLSRSDVEGPLAYSVHFVNDCIDAGNLLDLDRYR
IPHRYQRVANGAPSQPLLQSDAKKTEPVTPPLTPRGKRDKQPRVDREEQP
HLQQTTSPRRTRRTSTPVSKPKEKRKLKIYVDHYEGEVLERTPLPKQARR
ITTPNATPQQQRKAPAEVEPEDEEQSLRTPPPRRTRKRTTPTTMSQHKRE
TLRPEQEEQAQPQRTPLPRCARKTAPCARKTAPRISTNQRKRQTTQTAQE
EEEPQPVSFPRRAVLERATKVTAGHEREAEILVEEMSPPSPSERWTLDED
NQLRAVCEDVLTRLRKERVASSRLFHIDMWKALKNKDRLPSTRSAAQCRQ
RAMHLRHPEQTQRETGQHVAKGENKEELDRKRRQVRDEEDYDDEIQPVYK
ERRPAKVQRVANPEQQTQSNQRPRSRSKQFIRRMVRSLSYETQMTQRRVF
QVLRAHSCDRARTRSALLRERRDSETQKRNRR*
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mRNA from alignment at tig00000207_pilon:14842..16440-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11061.t1 ID=Ggra11061.t1|Name=Ggra11061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1599bp|location=Sequence derived from alignment at tig00000207_pilon:14842..16440- (Gracilaria gracilis GNS1m male)
ATGGCCGACGACGATCCCCCAAAGCTTTTCACCAGGGCCGTTCACTTTGG
CGGATGCGTAATTCATCGTCCGCTCTACTTTTACGTCGGGCTCAACAAGC
TCGGTCGCATACCTGTCGAGCGTCTCATCGTGCAGCACGGCGGACGTACA
GTCTCTCAGCCAAAAGCTGCTGACAATCAAATCATCCCCCTGATTGATCC
CTTGTCAAGGTCAGATGTTGAAGGCCCGCTTGCGTACTCTGTACACTTTG
TCAACGACTGCATTGATGCCGGGAATTTGCTCGACTTAGATCGATATCGA
ATTCCTCACCGCTATCAACGTGTCGCCAATGGCGCACCTTCTCAGCCTCT
TCTACAGAGCGATGCGAAGAAAACGGAACCCGTCACCCCACCCCTCACGC
CTCGAGGCAAACGCGATAAACAACCACGAGTAGACCGCGAAGAGCAACCA
CACCTACAACAAACAACCTCACCCAGACGCACCAGGAGAACCAGTACCCC
CGTCTCAAAGCCTAAAGAGAAACGCAAATTGAAAATATATGTAGACCATT
ATGAAGGAGAAGTACTAGAGCGGACACCACTTCCCAAGCAGGCAAGGAGA
ATAACTACTCCGAATGCCACCCCCCAACAACAACGCAAAGCACCAGCGGA
GGTAGAACCGGAAGATGAAGAACAATCGCTACGAACACCGCCTCCTAGAC
GCACGAGGAAGAGAACTACTCCAACAACCATGTCTCAGCACAAACGCGAA
ACACTGCGACCAGAACAGGAGGAACAAGCACAACCACAGCGAACACCGCT
TCCCCGATGCGCAAGGAAAACCGCCCCATGCGCAAGGAAAACTGCTCCCC
GAATCTCCACGAATCAACGAAAACGCCAAACAACACAAACAGCACAAGAA
GAAGAAGAACCGCAACCGGTTTCGTTTCCCAGACGCGCTGTTCTAGAACG
AGCAACCAAAGTAACAGCTGGACACGAACGGGAAGCAGAAATACTTGTTG
AAGAGATGTCTCCTCCATCACCCTCAGAGCGGTGGACTCTCGATGAGGAC
AACCAGCTCCGTGCAGTCTGTGAAGACGTCCTGACACGGCTTCGCAAGGA
GAGAGTTGCCTCATCCCGGTTGTTTCATATCGACATGTGGAAAGCGTTAA
AGAACAAGGATAGATTACCATCCACTCGGAGTGCGGCGCAATGCAGGCAA
CGAGCCATGCATTTGCGACATCCCGAACAGACGCAGCGTGAGACAGGTCA
ACATGTTGCAAAGGGAGAGAACAAGGAGGAGTTAGACCGAAAACGCCGCC
AAGTGCGTGATGAAGAAGACTACGATGACGAAATACAACCGGTTTATAAG
GAGCGTCGGCCCGCAAAGGTGCAACGCGTGGCCAATCCTGAGCAACAGAC
GCAAAGCAATCAAAGACCACGATCACGGTCAAAACAGTTTATTCGAAGAA
TGGTTCGTTCACTCTCATACGAGACACAGATGACTCAACGACGAGTATTT
CAGGTACTGCGGGCACATTCTTGCGATCGAGCCAGAACCAGATCTGCGCT
GCTGAGAGAACGTCGTGACAGTGAAACCCAAAAACGAAACCGCAGATAA
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Coding sequence (CDS) from alignment at tig00000207_pilon:14842..16440-

>Ggra11061.t1 ID=Ggra11061.t1|Name=Ggra11061.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1599bp|location=Sequence derived from alignment at tig00000207_pilon:14842..16440- (Gracilaria gracilis GNS1m male)
ATGGCCGACGACGATCCCCCAAAGCTTTTCACCAGGGCCGTTCACTTTGG
CGGATGCGTAATTCATCGTCCGCTCTACTTTTACGTCGGGCTCAACAAGC
TCGGTCGCATACCTGTCGAGCGTCTCATCGTGCAGCACGGCGGACGTACA
GTCTCTCAGCCAAAAGCTGCTGACAATCAAATCATCCCCCTGATTGATCC
CTTGTCAAGGTCAGATGTTGAAGGCCCGCTTGCGTACTCTGTACACTTTG
TCAACGACTGCATTGATGCCGGGAATTTGCTCGACTTAGATCGATATCGA
ATTCCTCACCGCTATCAACGTGTCGCCAATGGCGCACCTTCTCAGCCTCT
TCTACAGAGCGATGCGAAGAAAACGGAACCCGTCACCCCACCCCTCACGC
CTCGAGGCAAACGCGATAAACAACCACGAGTAGACCGCGAAGAGCAACCA
CACCTACAACAAACAACCTCACCCAGACGCACCAGGAGAACCAGTACCCC
CGTCTCAAAGCCTAAAGAGAAACGCAAATTGAAAATATATGTAGACCATT
ATGAAGGAGAAGTACTAGAGCGGACACCACTTCCCAAGCAGGCAAGGAGA
ATAACTACTCCGAATGCCACCCCCCAACAACAACGCAAAGCACCAGCGGA
GGTAGAACCGGAAGATGAAGAACAATCGCTACGAACACCGCCTCCTAGAC
GCACGAGGAAGAGAACTACTCCAACAACCATGTCTCAGCACAAACGCGAA
ACACTGCGACCAGAACAGGAGGAACAAGCACAACCACAGCGAACACCGCT
TCCCCGATGCGCAAGGAAAACCGCCCCATGCGCAAGGAAAACTGCTCCCC
GAATCTCCACGAATCAACGAAAACGCCAAACAACACAAACAGCACAAGAA
GAAGAAGAACCGCAACCGGTTTCGTTTCCCAGACGCGCTGTTCTAGAACG
AGCAACCAAAGTAACAGCTGGACACGAACGGGAAGCAGAAATACTTGTTG
AAGAGATGTCTCCTCCATCACCCTCAGAGCGGTGGACTCTCGATGAGGAC
AACCAGCTCCGTGCAGTCTGTGAAGACGTCCTGACACGGCTTCGCAAGGA
GAGAGTTGCCTCATCCCGGTTGTTTCATATCGACATGTGGAAAGCGTTAA
AGAACAAGGATAGATTACCATCCACTCGGAGTGCGGCGCAATGCAGGCAA
CGAGCCATGCATTTGCGACATCCCGAACAGACGCAGCGTGAGACAGGTCA
ACATGTTGCAAAGGGAGAGAACAAGGAGGAGTTAGACCGAAAACGCCGCC
AAGTGCGTGATGAAGAAGACTACGATGACGAAATACAACCGGTTTATAAG
GAGCGTCGGCCCGCAAAGGTGCAACGCGTGGCCAATCCTGAGCAACAGAC
GCAAAGCAATCAAAGACCACGATCACGGTCAAAACAGTTTATTCGAAGAA
TGGTTCGTTCACTCTCATACGAGACACAGATGACTCAACGACGAGTATTT
CAGGTACTGCGGGCACATTCTTGCGATCGAGCCAGAACCAGATCTGCGCT
GCTGAGAGAACGTCGTGACAGTGAAACCCAAAAACGAAACCGCAGATAA
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