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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra11018.t1.stop1 | Ggra11018.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000224_pilon 103684..103686 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra11018.t1.start1 | Ggra11018.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000224_pilon 106258..106260 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra11018.t1 ID=Ggra11018.t1|Name=Ggra11018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=859bp MDSDLHTCLRAAIAQGVPTTEILRNICNTQSRILPPAKDNVDPKLKGLGT LYAELGLKGVEAVKLGLSRKIRTTRADARNVISEWEARKLSCCFSESVES LLKLADTHLLAVSYKHEEEARWKRKGKNLIAKMSDRDQEALVNVIEGCSK IPNVKYVILWCDQVISTRQKDKGRNTLGWYNSGLVPYACLRVLKLSPHIS HEILESRVWLRAERSLGRLGWGTVEVADAVSGLLGDQGEFVSVSRIMNRI SGMILSGFWPKDLGYWKDDYIQMKKWALCVLSKMQFSVLPAPIFDDVEEV DNLTILSMMDEFAFVPRGLEYAEKPVHTDDRAFFLKATAWNIYTQDVWNV EKKTVSHYMGCIRLSYMFTWWASECMALIFGLLKGEDRATVILAVKDGDG YLLHRKAVDHAVYSHADQHPTEGALCALEGVARNYGLVSRTWSLLYSSSD DNDVVYTDPVLRQALGVWPTRADCLVPQVYIGLTTKLYRSAAVKVSARQT VINRFLQIHKSWNKHIREEYDNHISVTDTAAGTIWLEGFSKDKVSFGFYD YLTRGLILGESGFSNETVMLPSKWECIQEIRRIACSSSKDVQVLADEIFG SATEMNCDEFVRLKDVACFIVRGGFATCMNGLGLYSFLCSVAMHRGYWGT RVHARDGKMQIIFSNEHGDVRVAQRETILSGFQTLGLVRPEDAKAVLDVS VPIEDDAEEHGQYMYWKSMGSNTTRHQMQALFSNSVYKVDEGRHILLVDM SIVEGMEGQEDSVVDVESISLSVDRSIGYLSRALRGTGLRVSATGRVESG TVGESVLEPNIFSQEGRERLWDAIRRIDEIQERARAGQAESLRRQREILS SQNNGDSA* back to topspliced messenger RNA >Ggra11018.t1 ID=Ggra11018.t1|Name=Ggra11018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2577bp|location=Sequence derived from alignment at tig00000224_pilon:103684..106260- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATTCTGATCTTCACACATGTTTAAGAGCAGCAATAGCTCAAGGCGT TCCCACCACCGAAATCCTCCGTAACATTTGCAATACCCAATCGAGAATTC TACCTCCCGCAAAGGATAACGTGGATCCAAAGTTGAAAGGCCTTGGGACC TTGTACGCTGAATTGGGGTTGAAGGGTGTGGAAGCGGTCAAACTTGGCCT TTCTCGGAAAATTCGAACAACTCGTGCAGATGCCCGAAATGTTATCTCAG AATGGGAAGCGAGAAAACTCTCTTGTTGCTTCTCGGAAAGTGTTGAATCT CTTCTCAAGCTGGCTGATACGCATTTACTTGCCGTTTCTTACAAGCATGA GGAAGAAGCAAGATGGAAACGAAAAGGTAAGAACTTGATTGCGAAGATGT CCGACAGGGATCAGGAGGCTCTAGTGAATGTCATTGAGGGATGCTCGAAG ATTCCCAATGTGAAGTATGTAATTCTCTGGTGCGATCAAGTCATATCCAC CAGACAAAAAGACAAGGGAAGGAACACTTTGGGTTGGTACAATTCTGGGC TCGTCCCATATGCATGTCTTCGAGTTCTCAAGCTTTCTCCTCACATATCT CACGAAATCCTAGAGTCCCGTGTCTGGCTGAGGGCCGAGCGTTCGTTAGG TCGACTGGGATGGGGCACTGTGGAAGTAGCTGATGCCGTTTCTGGGCTCT TGGGAGATCAGGGAGAGTTTGTATCCGTTAGCAGGATCATGAACAGAATT TCAGGAATGATTCTCAGTGGTTTCTGGCCGAAAGACTTAGGATATTGGAA AGATGACTACATTCAAATGAAGAAATGGGCTCTCTGCGTACTATCGAAAA TGCAGTTTTCAGTTCTACCGGCCCCCATTTTCGATGACGTCGAGGAAGTG GATAACCTAACCATACTCTCGATGATGGATGAATTCGCATTTGTGCCAAG AGGTTTAGAATACGCTGAGAAACCGGTGCATACTGACGATAGGGCATTCT TCTTGAAAGCCACTGCCTGGAATATATATACTCAAGATGTCTGGAACGTT GAGAAGAAAACAGTTTCCCACTACATGGGCTGCATTAGGCTCTCCTATAT GTTTACATGGTGGGCTAGTGAATGCATGGCATTAATCTTCGGGTTGCTGA AAGGAGAAGATAGGGCAACTGTTATTCTCGCCGTGAAAGACGGAGATGGC TACTTGCTGCACAGAAAGGCGGTGGACCACGCGGTCTATTCTCATGCAGA TCAACACCCCACTGAGGGAGCACTGTGTGCGTTAGAGGGTGTTGCACGAA ATTATGGATTAGTTTCTCGGACTTGGTCACTGTTGTATAGTTCTTCTGAT GATAACGATGTAGTCTATACCGATCCCGTTCTAAGACAGGCGCTGGGAGT TTGGCCAACACGTGCCGATTGCCTTGTTCCGCAGGTTTACATTGGTTTGA CCACAAAACTTTACCGTTCTGCAGCTGTAAAAGTGAGTGCGAGACAAACA GTTATAAATCGATTTCTTCAGATCCACAAATCTTGGAACAAGCACATAAG AGAAGAATACGATAACCACATTTCTGTCACGGATACCGCAGCTGGCACTA TATGGTTGGAGGGATTCTCAAAAGACAAGGTTTCGTTTGGCTTCTATGAC TATCTAACACGAGGACTTATACTCGGAGAAAGCGGCTTCTCGAATGAAAC TGTGATGCTTCCGAGCAAGTGGGAATGTATTCAAGAAATACGAAGAATTG CCTGTTCTAGCTCGAAAGATGTCCAAGTCCTTGCAGATGAAATATTTGGA TCAGCCACTGAGATGAATTGCGATGAATTTGTCCGGCTCAAAGACGTTGC GTGTTTCATAGTTCGAGGGGGATTTGCTACTTGTATGAACGGACTAGGAC TTTACAGTTTTCTCTGTAGTGTGGCAATGCACAGAGGATACTGGGGAACT CGCGTCCACGCCCGTGACGGCAAGATGCAGATTATCTTCAGCAACGAGCA TGGTGATGTGCGTGTTGCACAGAGGGAAACGATCCTTTCGGGATTCCAGA CCCTCGGACTCGTCAGACCAGAAGATGCGAAAGCGGTACTAGATGTTTCG GTACCAATAGAGGATGACGCGGAAGAACATGGACAGTACATGTACTGGAA ATCGATGGGCTCCAACACGACAAGACACCAGATGCAAGCTCTGTTTTCGA ACTCAGTGTACAAAGTTGACGAAGGTAGACATATTTTGCTGGTTGATATG TCAATAGTCGAAGGAATGGAAGGTCAAGAAGACTCGGTGGTTGATGTTGA AAGTATTTCTTTATCGGTGGATAGGTCAATTGGTTATTTGTCGAGGGCCT TGCGGGGAACGGGACTAAGAGTATCCGCAACTGGTCGCGTCGAATCTGGA ACTGTTGGAGAATCCGTGTTAGAACCAAACATCTTCTCACAGGAAGGCCG TGAACGTTTATGGGACGCAATTAGGAGAATCGATGAGATACAGGAAAGGG CCAGAGCTGGCCAAGCGGAATCGCTGCGGAGGCAAAGGGAAATCCTTAGC AGTCAGAACAACGGCGACAGCGCTTAG back to topprotein sequence of Ggra11018.t1 >Ggra11018.t1 ID=Ggra11018.t1|Name=Ggra11018.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=859bp
MDSDLHTCLRAAIAQGVPTTEILRNICNTQSRILPPAKDNVDPKLKGLGT LYAELGLKGVEAVKLGLSRKIRTTRADARNVISEWEARKLSCCFSESVES LLKLADTHLLAVSYKHEEEARWKRKGKNLIAKMSDRDQEALVNVIEGCSK IPNVKYVILWCDQVISTRQKDKGRNTLGWYNSGLVPYACLRVLKLSPHIS HEILESRVWLRAERSLGRLGWGTVEVADAVSGLLGDQGEFVSVSRIMNRI SGMILSGFWPKDLGYWKDDYIQMKKWALCVLSKMQFSVLPAPIFDDVEEV DNLTILSMMDEFAFVPRGLEYAEKPVHTDDRAFFLKATAWNIYTQDVWNV EKKTVSHYMGCIRLSYMFTWWASECMALIFGLLKGEDRATVILAVKDGDG YLLHRKAVDHAVYSHADQHPTEGALCALEGVARNYGLVSRTWSLLYSSSD DNDVVYTDPVLRQALGVWPTRADCLVPQVYIGLTTKLYRSAAVKVSARQT VINRFLQIHKSWNKHIREEYDNHISVTDTAAGTIWLEGFSKDKVSFGFYD YLTRGLILGESGFSNETVMLPSKWECIQEIRRIACSSSKDVQVLADEIFG SATEMNCDEFVRLKDVACFIVRGGFATCMNGLGLYSFLCSVAMHRGYWGT RVHARDGKMQIIFSNEHGDVRVAQRETILSGFQTLGLVRPEDAKAVLDVS VPIEDDAEEHGQYMYWKSMGSNTTRHQMQALFSNSVYKVDEGRHILLVDM SIVEGMEGQEDSVVDVESISLSVDRSIGYLSRALRGTGLRVSATGRVESG TVGESVLEPNIFSQEGRERLWDAIRRIDEIQERARAGQAESLRRQREILS SQNNGDSA* back to topmRNA from alignment at tig00000224_pilon:103684..106260- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra11018.t1 ID=Ggra11018.t1|Name=Ggra11018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2577bp|location=Sequence derived from alignment at tig00000224_pilon:103684..106260- (Gracilaria gracilis GNS1m male) ATGGATTCTGATCTTCACACATGTTTAAGAGCAGCAATAGCTCAAGGCGT
TCCCACCACCGAAATCCTCCGTAACATTTGCAATACCCAATCGAGAATTC
TACCTCCCGCAAAGGATAACGTGGATCCAAAGTTGAAAGGCCTTGGGACC
TTGTACGCTGAATTGGGGTTGAAGGGTGTGGAAGCGGTCAAACTTGGCCT
TTCTCGGAAAATTCGAACAACTCGTGCAGATGCCCGAAATGTTATCTCAG
AATGGGAAGCGAGAAAACTCTCTTGTTGCTTCTCGGAAAGTGTTGAATCT
CTTCTCAAGCTGGCTGATACGCATTTACTTGCCGTTTCTTACAAGCATGA
GGAAGAAGCAAGATGGAAACGAAAAGGTAAGAACTTGATTGCGAAGATGT
CCGACAGGGATCAGGAGGCTCTAGTGAATGTCATTGAGGGATGCTCGAAG
ATTCCCAATGTGAAGTATGTAATTCTCTGGTGCGATCAAGTCATATCCAC
CAGACAAAAAGACAAGGGAAGGAACACTTTGGGTTGGTACAATTCTGGGC
TCGTCCCATATGCATGTCTTCGAGTTCTCAAGCTTTCTCCTCACATATCT
CACGAAATCCTAGAGTCCCGTGTCTGGCTGAGGGCCGAGCGTTCGTTAGG
TCGACTGGGATGGGGCACTGTGGAAGTAGCTGATGCCGTTTCTGGGCTCT
TGGGAGATCAGGGAGAGTTTGTATCCGTTAGCAGGATCATGAACAGAATT
TCAGGAATGATTCTCAGTGGTTTCTGGCCGAAAGACTTAGGATATTGGAA
AGATGACTACATTCAAATGAAGAAATGGGCTCTCTGCGTACTATCGAAAA
TGCAGTTTTCAGTTCTACCGGCCCCCATTTTCGATGACGTCGAGGAAGTG
GATAACCTAACCATACTCTCGATGATGGATGAATTCGCATTTGTGCCAAG
AGGTTTAGAATACGCTGAGAAACCGGTGCATACTGACGATAGGGCATTCT
TCTTGAAAGCCACTGCCTGGAATATATATACTCAAGATGTCTGGAACGTT
GAGAAGAAAACAGTTTCCCACTACATGGGCTGCATTAGGCTCTCCTATAT
GTTTACATGGTGGGCTAGTGAATGCATGGCATTAATCTTCGGGTTGCTGA
AAGGAGAAGATAGGGCAACTGTTATTCTCGCCGTGAAAGACGGAGATGGC
TACTTGCTGCACAGAAAGGCGGTGGACCACGCGGTCTATTCTCATGCAGA
TCAACACCCCACTGAGGGAGCACTGTGTGCGTTAGAGGGTGTTGCACGAA
ATTATGGATTAGTTTCTCGGACTTGGTCACTGTTGTATAGTTCTTCTGAT
GATAACGATGTAGTCTATACCGATCCCGTTCTAAGACAGGCGCTGGGAGT
TTGGCCAACACGTGCCGATTGCCTTGTTCCGCAGGTTTACATTGGTTTGA
CCACAAAACTTTACCGTTCTGCAGCTGTAAAAGTGAGTGCGAGACAAACA
GTTATAAATCGATTTCTTCAGATCCACAAATCTTGGAACAAGCACATAAG
AGAAGAATACGATAACCACATTTCTGTCACGGATACCGCAGCTGGCACTA
TATGGTTGGAGGGATTCTCAAAAGACAAGGTTTCGTTTGGCTTCTATGAC
TATCTAACACGAGGACTTATACTCGGAGAAAGCGGCTTCTCGAATGAAAC
TGTGATGCTTCCGAGCAAGTGGGAATGTATTCAAGAAATACGAAGAATTG
CCTGTTCTAGCTCGAAAGATGTCCAAGTCCTTGCAGATGAAATATTTGGA
TCAGCCACTGAGATGAATTGCGATGAATTTGTCCGGCTCAAAGACGTTGC
GTGTTTCATAGTTCGAGGGGGATTTGCTACTTGTATGAACGGACTAGGAC
TTTACAGTTTTCTCTGTAGTGTGGCAATGCACAGAGGATACTGGGGAACT
CGCGTCCACGCCCGTGACGGCAAGATGCAGATTATCTTCAGCAACGAGCA
TGGTGATGTGCGTGTTGCACAGAGGGAAACGATCCTTTCGGGATTCCAGA
CCCTCGGACTCGTCAGACCAGAAGATGCGAAAGCGGTACTAGATGTTTCG
GTACCAATAGAGGATGACGCGGAAGAACATGGACAGTACATGTACTGGAA
ATCGATGGGCTCCAACACGACAAGACACCAGATGCAAGCTCTGTTTTCGA
ACTCAGTGTACAAAGTTGACGAAGGTAGACATATTTTGCTGGTTGATATG
TCAATAGTCGAAGGAATGGAAGGTCAAGAAGACTCGGTGGTTGATGTTGA
AAGTATTTCTTTATCGGTGGATAGGTCAATTGGTTATTTGTCGAGGGCCT
TGCGGGGAACGGGACTAAGAGTATCCGCAACTGGTCGCGTCGAATCTGGA
ACTGTTGGAGAATCCGTGTTAGAACCAAACATCTTCTCACAGGAAGGCCG
TGAACGTTTATGGGACGCAATTAGGAGAATCGATGAGATACAGGAAAGGG
CCAGAGCTGGCCAAGCGGAATCGCTGCGGAGGCAAAGGGAAATCCTTAGC
AGTCAGAACAACGGCGACAGCGCTTAG back to topCoding sequence (CDS) from alignment at tig00000224_pilon:103684..106260- >Ggra11018.t1 ID=Ggra11018.t1|Name=Ggra11018.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2577bp|location=Sequence derived from alignment at tig00000224_pilon:103684..106260- (Gracilaria gracilis GNS1m male) ATGGATTCTGATCTTCACACATGTTTAAGAGCAGCAATAGCTCAAGGCGT TCCCACCACCGAAATCCTCCGTAACATTTGCAATACCCAATCGAGAATTC TACCTCCCGCAAAGGATAACGTGGATCCAAAGTTGAAAGGCCTTGGGACC TTGTACGCTGAATTGGGGTTGAAGGGTGTGGAAGCGGTCAAACTTGGCCT TTCTCGGAAAATTCGAACAACTCGTGCAGATGCCCGAAATGTTATCTCAG AATGGGAAGCGAGAAAACTCTCTTGTTGCTTCTCGGAAAGTGTTGAATCT CTTCTCAAGCTGGCTGATACGCATTTACTTGCCGTTTCTTACAAGCATGA GGAAGAAGCAAGATGGAAACGAAAAGGTAAGAACTTGATTGCGAAGATGT CCGACAGGGATCAGGAGGCTCTAGTGAATGTCATTGAGGGATGCTCGAAG ATTCCCAATGTGAAGTATGTAATTCTCTGGTGCGATCAAGTCATATCCAC CAGACAAAAAGACAAGGGAAGGAACACTTTGGGTTGGTACAATTCTGGGC TCGTCCCATATGCATGTCTTCGAGTTCTCAAGCTTTCTCCTCACATATCT CACGAAATCCTAGAGTCCCGTGTCTGGCTGAGGGCCGAGCGTTCGTTAGG TCGACTGGGATGGGGCACTGTGGAAGTAGCTGATGCCGTTTCTGGGCTCT TGGGAGATCAGGGAGAGTTTGTATCCGTTAGCAGGATCATGAACAGAATT TCAGGAATGATTCTCAGTGGTTTCTGGCCGAAAGACTTAGGATATTGGAA AGATGACTACATTCAAATGAAGAAATGGGCTCTCTGCGTACTATCGAAAA TGCAGTTTTCAGTTCTACCGGCCCCCATTTTCGATGACGTCGAGGAAGTG GATAACCTAACCATACTCTCGATGATGGATGAATTCGCATTTGTGCCAAG AGGTTTAGAATACGCTGAGAAACCGGTGCATACTGACGATAGGGCATTCT TCTTGAAAGCCACTGCCTGGAATATATATACTCAAGATGTCTGGAACGTT GAGAAGAAAACAGTTTCCCACTACATGGGCTGCATTAGGCTCTCCTATAT GTTTACATGGTGGGCTAGTGAATGCATGGCATTAATCTTCGGGTTGCTGA AAGGAGAAGATAGGGCAACTGTTATTCTCGCCGTGAAAGACGGAGATGGC TACTTGCTGCACAGAAAGGCGGTGGACCACGCGGTCTATTCTCATGCAGA TCAACACCCCACTGAGGGAGCACTGTGTGCGTTAGAGGGTGTTGCACGAA ATTATGGATTAGTTTCTCGGACTTGGTCACTGTTGTATAGTTCTTCTGAT GATAACGATGTAGTCTATACCGATCCCGTTCTAAGACAGGCGCTGGGAGT TTGGCCAACACGTGCCGATTGCCTTGTTCCGCAGGTTTACATTGGTTTGA CCACAAAACTTTACCGTTCTGCAGCTGTAAAAGTGAGTGCGAGACAAACA GTTATAAATCGATTTCTTCAGATCCACAAATCTTGGAACAAGCACATAAG AGAAGAATACGATAACCACATTTCTGTCACGGATACCGCAGCTGGCACTA TATGGTTGGAGGGATTCTCAAAAGACAAGGTTTCGTTTGGCTTCTATGAC TATCTAACACGAGGACTTATACTCGGAGAAAGCGGCTTCTCGAATGAAAC TGTGATGCTTCCGAGCAAGTGGGAATGTATTCAAGAAATACGAAGAATTG CCTGTTCTAGCTCGAAAGATGTCCAAGTCCTTGCAGATGAAATATTTGGA TCAGCCACTGAGATGAATTGCGATGAATTTGTCCGGCTCAAAGACGTTGC GTGTTTCATAGTTCGAGGGGGATTTGCTACTTGTATGAACGGACTAGGAC TTTACAGTTTTCTCTGTAGTGTGGCAATGCACAGAGGATACTGGGGAACT CGCGTCCACGCCCGTGACGGCAAGATGCAGATTATCTTCAGCAACGAGCA TGGTGATGTGCGTGTTGCACAGAGGGAAACGATCCTTTCGGGATTCCAGA CCCTCGGACTCGTCAGACCAGAAGATGCGAAAGCGGTACTAGATGTTTCG GTACCAATAGAGGATGACGCGGAAGAACATGGACAGTACATGTACTGGAA ATCGATGGGCTCCAACACGACAAGACACCAGATGCAAGCTCTGTTTTCGA ACTCAGTGTACAAAGTTGACGAAGGTAGACATATTTTGCTGGTTGATATG TCAATAGTCGAAGGAATGGAAGGTCAAGAAGACTCGGTGGTTGATGTTGA AAGTATTTCTTTATCGGTGGATAGGTCAATTGGTTATTTGTCGAGGGCCT TGCGGGGAACGGGACTAAGAGTATCCGCAACTGGTCGCGTCGAATCTGGA ACTGTTGGAGAATCCGTGTTAGAACCAAACATCTTCTCACAGGAAGGCCG TGAACGTTTATGGGACGCAATTAGGAGAATCGATGAGATACAGGAAAGGG CCAGAGCTGGCCAAGCGGAATCGCTGCGGAGGCAAAGGGAAATCCTTAGC AGTCAGAACAACGGCGACAGCGCTTAG back to top
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