Ggra11014.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11014.t1
Unique NameGgra11014.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000224_piloncontigtig00000224_pilon:46769..47353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11014Ggra11014Gracilaria gracilis GNS1m malegenetig00000224_pilon 46769..47353 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11014.t1.stop1Ggra11014.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000224_pilon 46769..46771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11014.t1.CDS1Ggra11014.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000224_pilon 46769..47353 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11014.t1.exon1Ggra11014.t1.exon1Gracilaria gracilis GNS1m maleexontig00000224_pilon 46769..47353 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11014.t1.start1Ggra11014.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000224_pilon 47351..47353 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11014.t1Ggra11014.t1Gracilaria gracilis GNS1m malepolypeptidetig00000224_pilon 46769..47353 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11014.t1 ID=Ggra11014.t1|Name=Ggra11014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=195bp
MLTVTIFFAILGCSLAASGCSRDLLFSPDVKGRSHTQQFPCYPNRCPTTT
TVEVNDDFIKYVPPHGEYNDYRCFEHYLIFPDIERPVIIYFPETLYSAPG
HGCQGPQARARVISGARGPKRNQFIDGLNKTVIALSKMRDFGCKAGEMEP
IEEEYVNPWLEGPIALLRAIAYRHGICSDFNPNQFSFETSHHRC*
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spliced messenger RNA

>Ggra11014.t1 ID=Ggra11014.t1|Name=Ggra11014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=585bp|location=Sequence derived from alignment at tig00000224_pilon:46769..47353- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGACCGTTACCATCTTCTTTGCCATCTTGGGTTGCTCACTCGCCGC
TTCCGGATGCTCGAGGGACCTCCTTTTCTCACCGGATGTGAAGGGCAGAA
GCCACACACAACAATTTCCATGCTACCCGAATCGATGCCCGACAACCACT
ACAGTCGAAGTCAATGACGATTTTATCAAATACGTTCCGCCTCACGGAGA
GTACAATGACTATCGCTGTTTTGAGCATTATTTAATATTTCCAGACATCG
AGAGGCCGGTGATTATCTACTTTCCGGAAACGTTGTACTCGGCGCCTGGA
CATGGTTGCCAGGGACCGCAGGCTAGGGCGAGGGTGATTTCTGGAGCTCG
AGGCCCCAAACGAAATCAGTTTATCGATGGTTTGAACAAAACGGTTATCG
CGTTGAGCAAAATGCGCGATTTCGGGTGCAAAGCAGGCGAAATGGAGCCC
ATAGAAGAAGAGTACGTGAACCCTTGGCTGGAAGGGCCTATCGCCCTTCT
GCGCGCTATTGCGTACAGACATGGAATCTGTTCGGACTTCAACCCGAATC
AGTTCAGTTTTGAAACTTCTCATCACAGGTGTTAG
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protein sequence of Ggra11014.t1

>Ggra11014.t1 ID=Ggra11014.t1|Name=Ggra11014.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MLTVTIFFAILGCSLAASGCSRDLLFSPDVKGRSHTQQFPCYPNRCPTTT
TVEVNDDFIKYVPPHGEYNDYRCFEHYLIFPDIERPVIIYFPETLYSAPG
HGCQGPQARARVISGARGPKRNQFIDGLNKTVIALSKMRDFGCKAGEMEP
IEEEYVNPWLEGPIALLRAIAYRHGICSDFNPNQFSFETSHHRC*
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mRNA from alignment at tig00000224_pilon:46769..47353-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11014.t1 ID=Ggra11014.t1|Name=Ggra11014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=585bp|location=Sequence derived from alignment at tig00000224_pilon:46769..47353- (Gracilaria gracilis GNS1m male)
ATGTTGACCGTTACCATCTTCTTTGCCATCTTGGGTTGCTCACTCGCCGC
TTCCGGATGCTCGAGGGACCTCCTTTTCTCACCGGATGTGAAGGGCAGAA
GCCACACACAACAATTTCCATGCTACCCGAATCGATGCCCGACAACCACT
ACAGTCGAAGTCAATGACGATTTTATCAAATACGTTCCGCCTCACGGAGA
GTACAATGACTATCGCTGTTTTGAGCATTATTTAATATTTCCAGACATCG
AGAGGCCGGTGATTATCTACTTTCCGGAAACGTTGTACTCGGCGCCTGGA
CATGGTTGCCAGGGACCGCAGGCTAGGGCGAGGGTGATTTCTGGAGCTCG
AGGCCCCAAACGAAATCAGTTTATCGATGGTTTGAACAAAACGGTTATCG
CGTTGAGCAAAATGCGCGATTTCGGGTGCAAAGCAGGCGAAATGGAGCCC
ATAGAAGAAGAGTACGTGAACCCTTGGCTGGAAGGGCCTATCGCCCTTCT
GCGCGCTATTGCGTACAGACATGGAATCTGTTCGGACTTCAACCCGAATC
AGTTCAGTTTTGAAACTTCTCATCACAGGTGTTAG
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Coding sequence (CDS) from alignment at tig00000224_pilon:46769..47353-

>Ggra11014.t1 ID=Ggra11014.t1|Name=Ggra11014.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=585bp|location=Sequence derived from alignment at tig00000224_pilon:46769..47353- (Gracilaria gracilis GNS1m male)
ATGTTGACCGTTACCATCTTCTTTGCCATCTTGGGTTGCTCACTCGCCGC
TTCCGGATGCTCGAGGGACCTCCTTTTCTCACCGGATGTGAAGGGCAGAA
GCCACACACAACAATTTCCATGCTACCCGAATCGATGCCCGACAACCACT
ACAGTCGAAGTCAATGACGATTTTATCAAATACGTTCCGCCTCACGGAGA
GTACAATGACTATCGCTGTTTTGAGCATTATTTAATATTTCCAGACATCG
AGAGGCCGGTGATTATCTACTTTCCGGAAACGTTGTACTCGGCGCCTGGA
CATGGTTGCCAGGGACCGCAGGCTAGGGCGAGGGTGATTTCTGGAGCTCG
AGGCCCCAAACGAAATCAGTTTATCGATGGTTTGAACAAAACGGTTATCG
CGTTGAGCAAAATGCGCGATTTCGGGTGCAAAGCAGGCGAAATGGAGCCC
ATAGAAGAAGAGTACGTGAACCCTTGGCTGGAAGGGCCTATCGCCCTTCT
GCGCGCTATTGCGTACAGACATGGAATCTGTTCGGACTTCAACCCGAATC
AGTTCAGTTTTGAAACTTCTCATCACAGGTGTTAG
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