Ggra10793.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra10793.t1
Unique Name	Ggra10793.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	580

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000225_pilon	contig	tig00000225_pilon:94143..95882 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10793	Ggra10793	Gracilaria gracilis GNS1m male	gene	tig00000225_pilon 94143..95882 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra10793.t1.stop1	Ggra10793.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000225_pilon 94143..94145 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra10793.t1.CDS1	Ggra10793.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000225_pilon 94143..95882 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra10793.t1.exon1	Ggra10793.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000225_pilon 94143..95882 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra10793.t1.start1	Ggra10793.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000225_pilon 95880..95882 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra10793.t1	Ggra10793.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000225_pilon 94143..95882 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000225_pilon:94143..95882-
coding sequence from alignment at tig00000225_pilon:94143..95882-

mRNA sequence

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=580bp
MLKIPLSVGTFNAIKYAVEELVIIYIFQRCIRIISGIWIRRRLRKKTYVL
GGTPILDELALQPNLGRTGLGRFFLLVAFIIMVHGAALFLEFSTDSTVEV
EYAGIGMIRARTSVFDSASYEKKASISKIYRQGVDSVVVGGNSGNEYRAV
ELGGSRINRYSEDYSNVSLYSYAGMPDCTGQRYCLRRVTMKVEQARVIAR
SDGRLNLRFGSITSVTASIKAYSEQDEDEMAPPTFPAAEKLPSVSSEAGN
DAFDPANEGLEASGPDPPVIPEPGDNVFEAGLLDPGSSIFEAGSIFDTGG
LIGIPNIADVVRDVITDKEETDAEDLGVRKLLCINDIRGISTDERAICLS
EHSGAPRSESSCDGLPMQQKPVYLKVFGTREGFENFTVGNTYQSKSFGAA
LFDVCGNWSVGIDAMILAAQVISFRNTIDDPIDLRSLAEVISISSVGDFG
NGTQARESRMVAFVTRPIVYLPALAVYGALAFVAILVVLVSHGFARGNSF
RLNDALVYAAVLSNHIDGMERDGTDCDSTREVKSIALYTVEDGLSSHLGP
APASWAPHVHGNEIRGTESKTGKTGEELL*

spliced messenger RNA

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA

protein sequence of Ggra10793.t1

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=580bp
MLKIPLSVGTFNAIKYAVEELVIIYIFQRCIRIISGIWIRRRLRKKTYVL
GGTPILDELALQPNLGRTGLGRFFLLVAFIIMVHGAALFLEFSTDSTVEV
EYAGIGMIRARTSVFDSASYEKKASISKIYRQGVDSVVVGGNSGNEYRAV
ELGGSRINRYSEDYSNVSLYSYAGMPDCTGQRYCLRRVTMKVEQARVIAR
SDGRLNLRFGSITSVTASIKAYSEQDEDEMAPPTFPAAEKLPSVSSEAGN
DAFDPANEGLEASGPDPPVIPEPGDNVFEAGLLDPGSSIFEAGSIFDTGG
LIGIPNIADVVRDVITDKEETDAEDLGVRKLLCINDIRGISTDERAICLS
EHSGAPRSESSCDGLPMQQKPVYLKVFGTREGFENFTVGNTYQSKSFGAA
LFDVCGNWSVGIDAMILAAQVISFRNTIDDPIDLRSLAEVISISSVGDFG
NGTQARESRMVAFVTRPIVYLPALAVYGALAFVAILVVLVSHGFARGNSF
RLNDALVYAAVLSNHIDGMERDGTDCDSTREVKSIALYTVEDGLSSHLGP
APASWAPHVHGNEIRGTESKTGKTGEELL*

mRNA from alignment at tig00000225_pilon:94143..95882-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA

Coding sequence (CDS) from alignment at tig00000225_pilon:94143..95882-

>Ggra10793.t1 ID=Ggra10793.t1|Name=Ggra10793.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1740bp|location=Sequence derived from alignment at tig00000225_pilon:94143..95882- (Gracilaria gracilis GNS1m male)
ATGCTGAAAATTCCCCTCTCCGTTGGCACGTTCAATGCAATCAAGTACGC
TGTTGAGGAGCTGGTCATTATCTACATCTTCCAGAGATGCATTCGAATTA
TTTCCGGAATTTGGATTAGGAGGCGGCTACGAAAGAAGACTTATGTTCTG
GGAGGAACGCCTATTCTTGACGAACTTGCTCTTCAGCCCAATTTAGGAAG
GACGGGTCTAGGTCGTTTCTTTCTACTGGTGGCGTTCATCATTATGGTTC
ATGGCGCTGCTCTTTTCCTAGAGTTCAGTACTGACAGTACTGTAGAAGTT
GAGTACGCTGGCATTGGAATGATACGTGCACGAACGTCTGTTTTCGACTC
TGCTTCGTACGAAAAGAAGGCTTCCATTTCGAAGATTTATCGTCAAGGTG
TAGACTCCGTTGTTGTTGGTGGGAATTCTGGGAACGAGTACAGGGCTGTG
GAACTGGGTGGGAGCCGTATCAACCGATACTCCGAAGATTACAGCAACGT
CAGTTTGTATTCATACGCAGGTATGCCCGATTGTACGGGCCAGCGGTATT
GTTTACGACGGGTTACCATGAAGGTGGAACAAGCACGAGTGATTGCCAGA
TCTGACGGTAGGTTGAATTTACGTTTCGGGAGTATCACCTCCGTAACAGC
ATCAATCAAAGCGTATTCTGAACAGGACGAAGATGAAATGGCTCCTCCAA
CTTTCCCGGCTGCTGAAAAGTTACCCTCTGTATCATCCGAGGCTGGAAAC
GATGCATTCGACCCTGCAAATGAGGGTCTCGAAGCCTCCGGCCCTGACCC
ACCGGTAATACCAGAGCCCGGAGACAATGTATTCGAGGCTGGATTACTCG
ATCCCGGAAGTAGTATATTCGAGGCTGGAAGTATATTTGATACTGGAGGC
CTCATAGGAATTCCTAATATCGCAGATGTAGTCCGAGATGTGATCACAGA
CAAAGAAGAAACCGATGCTGAAGATCTCGGCGTGCGGAAGCTCCTTTGCA
TAAACGACATTCGCGGGATTTCAACTGACGAAAGAGCGATATGCCTGTCA
GAACATTCTGGTGCGCCACGTTCGGAGAGCTCTTGTGATGGTCTCCCAAT
GCAACAGAAACCGGTGTACTTGAAAGTTTTCGGAACTCGAGAAGGGTTTG
AAAATTTTACGGTCGGAAACACATATCAATCGAAGTCGTTCGGAGCGGCA
CTATTTGATGTTTGTGGCAACTGGAGTGTTGGGATCGATGCGATGATTCT
CGCAGCTCAAGTAATCAGCTTCAGAAACACCATCGATGATCCTATTGACC
TCAGGTCGTTGGCTGAAGTGATCTCCATATCTTCGGTGGGCGATTTTGGG
AACGGCACACAAGCCCGAGAGAGTAGAATGGTGGCATTCGTAACAAGGCC
CATCGTGTATTTGCCCGCTCTAGCTGTTTACGGAGCACTCGCATTCGTGG
CCATACTAGTGGTTCTAGTTTCTCACGGGTTTGCGAGGGGAAACAGCTTT
CGTCTGAATGATGCTTTGGTGTACGCCGCCGTGTTGTCGAACCATATTGA
TGGCATGGAAAGGGACGGCACTGACTGTGACAGCACTCGCGAGGTGAAAA
GCATTGCCCTTTACACAGTGGAAGATGGGTTGAGCAGTCACCTGGGACCT
GCGCCGGCGTCGTGGGCTCCACACGTTCACGGGAACGAGATTCGTGGTAC
GGAATCTAAAACTGGGAAAACAGGCGAAGAACTTCTTTGA