Ggra10752.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10752.t1
Unique NameGgra10752.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length363
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:107497..108585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10752Ggra10752Gracilaria gracilis GNS1m malegenetig00000200_pilon 107497..108585 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10752.t1.start1Ggra10752.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000200_pilon 107497..107499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10752.t1.CDS1Ggra10752.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000200_pilon 107497..108585 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10752.t1.exon1Ggra10752.t1.exon1Gracilaria gracilis GNS1m maleexontig00000200_pilon 107497..108585 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10752.t1.stop1Ggra10752.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000200_pilon 108583..108585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10752.t1Ggra10752.t1Gracilaria gracilis GNS1m malepolypeptidetig00000200_pilon 107497..108585 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10752.t1 ID=Ggra10752.t1|Name=Ggra10752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=363bp
MRSSEVPGGVNIPLAMKRMKSLGVSDAVETCSIFVDGTIPAVLEWTRIFM
DDCVMSATKNSKRPAELKNETAQRICDTNVFVGFEGGTDWRRGEMRFWQN
ICGFAVKLPCNGKGRNILEAMNRYPSSALVYWGLRPIYGRYMTFGDRRIP
RVTLAQNAISLFSPSGVCHDRIGTWFDEIASSRMQELVIHLSAVAEYIFV
CLCHVMDRAKPGDDISKEFISFLDFSIERHGHMSSSTKLLIANSLSLKGL
SEQNIFFCLSKSTSTAHSAVIEGAAVARKVYGKKKTEHSQRKLLGLSELH
KPLPEVLDLFVAKMASEIRMKIDGENAVDDFPMHVRKVLRSSEHIYIQVG
KECFDIVVSGVE*
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spliced messenger RNA

>Ggra10752.t1 ID=Ggra10752.t1|Name=Ggra10752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1089bp|location=Sequence derived from alignment at tig00000200_pilon:107497..108585+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGAAGTTCAGAAGTGCCAGGGGGTGTGAACATACCTCTGGCGATGAA
GAGAATGAAGAGTTTAGGAGTGTCTGATGCAGTCGAAACATGCTCTATTT
TTGTGGATGGAACCATTCCGGCGGTTCTGGAATGGACTAGAATTTTTATG
GATGACTGCGTCATGTCGGCTACGAAGAATAGCAAACGTCCCGCTGAACT
GAAGAACGAAACAGCGCAAAGAATCTGTGACACGAATGTGTTCGTTGGTT
TTGAAGGTGGCACAGATTGGCGAAGAGGAGAGATGCGATTCTGGCAGAAT
ATCTGTGGCTTCGCTGTCAAGTTGCCGTGTAATGGAAAAGGACGCAATAT
ACTGGAGGCAATGAACAGATACCCTTCGTCTGCATTGGTGTACTGGGGGC
TTCGACCAATTTACGGAAGGTACATGACATTCGGAGATCGCCGAATTCCC
CGTGTGACCTTAGCTCAAAATGCTATATCGCTCTTCAGTCCTTCGGGAGT
ATGCCATGACAGAATAGGCACATGGTTTGACGAAATCGCATCTAGTAGAA
TGCAGGAACTGGTTATACATCTTTCCGCAGTGGCTGAATACATTTTTGTT
TGCCTTTGCCATGTTATGGACCGTGCGAAACCGGGAGATGATATATCGAA
AGAGTTCATCTCTTTCTTGGATTTTTCAATTGAACGCCATGGGCATATGT
CGTCATCCACCAAGTTGCTCATTGCAAATTCATTGTCGCTCAAGGGTCTA
TCCGAACAGAACATTTTCTTTTGTTTATCTAAGTCTACTTCAACCGCACA
CAGTGCAGTTATAGAGGGAGCTGCTGTTGCACGTAAAGTATACGGGAAGA
AGAAAACGGAACATAGCCAGAGAAAACTTTTGGGTCTTAGCGAGCTTCAC
AAACCCCTCCCAGAAGTTTTGGATCTGTTCGTTGCGAAAATGGCCTCCGA
GATACGTATGAAGATTGATGGTGAGAATGCCGTCGATGATTTTCCCATGC
ATGTGAGAAAAGTATTGCGATCGTCAGAGCATATCTACATCCAGGTCGGG
AAGGAGTGTTTTGACATTGTTGTGAGCGGTGTCGAATGA
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protein sequence of Ggra10752.t1

>Ggra10752.t1 ID=Ggra10752.t1|Name=Ggra10752.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=363bp
MRSSEVPGGVNIPLAMKRMKSLGVSDAVETCSIFVDGTIPAVLEWTRIFM
DDCVMSATKNSKRPAELKNETAQRICDTNVFVGFEGGTDWRRGEMRFWQN
ICGFAVKLPCNGKGRNILEAMNRYPSSALVYWGLRPIYGRYMTFGDRRIP
RVTLAQNAISLFSPSGVCHDRIGTWFDEIASSRMQELVIHLSAVAEYIFV
CLCHVMDRAKPGDDISKEFISFLDFSIERHGHMSSSTKLLIANSLSLKGL
SEQNIFFCLSKSTSTAHSAVIEGAAVARKVYGKKKTEHSQRKLLGLSELH
KPLPEVLDLFVAKMASEIRMKIDGENAVDDFPMHVRKVLRSSEHIYIQVG
KECFDIVVSGVE*
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mRNA from alignment at tig00000200_pilon:107497..108585+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10752.t1 ID=Ggra10752.t1|Name=Ggra10752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1089bp|location=Sequence derived from alignment at tig00000200_pilon:107497..108585+ (Gracilaria gracilis GNS1m male)
ATGAGAAGTTCAGAAGTGCCAGGGGGTGTGAACATACCTCTGGCGATGAA
GAGAATGAAGAGTTTAGGAGTGTCTGATGCAGTCGAAACATGCTCTATTT
TTGTGGATGGAACCATTCCGGCGGTTCTGGAATGGACTAGAATTTTTATG
GATGACTGCGTCATGTCGGCTACGAAGAATAGCAAACGTCCCGCTGAACT
GAAGAACGAAACAGCGCAAAGAATCTGTGACACGAATGTGTTCGTTGGTT
TTGAAGGTGGCACAGATTGGCGAAGAGGAGAGATGCGATTCTGGCAGAAT
ATCTGTGGCTTCGCTGTCAAGTTGCCGTGTAATGGAAAAGGACGCAATAT
ACTGGAGGCAATGAACAGATACCCTTCGTCTGCATTGGTGTACTGGGGGC
TTCGACCAATTTACGGAAGGTACATGACATTCGGAGATCGCCGAATTCCC
CGTGTGACCTTAGCTCAAAATGCTATATCGCTCTTCAGTCCTTCGGGAGT
ATGCCATGACAGAATAGGCACATGGTTTGACGAAATCGCATCTAGTAGAA
TGCAGGAACTGGTTATACATCTTTCCGCAGTGGCTGAATACATTTTTGTT
TGCCTTTGCCATGTTATGGACCGTGCGAAACCGGGAGATGATATATCGAA
AGAGTTCATCTCTTTCTTGGATTTTTCAATTGAACGCCATGGGCATATGT
CGTCATCCACCAAGTTGCTCATTGCAAATTCATTGTCGCTCAAGGGTCTA
TCCGAACAGAACATTTTCTTTTGTTTATCTAAGTCTACTTCAACCGCACA
CAGTGCAGTTATAGAGGGAGCTGCTGTTGCACGTAAAGTATACGGGAAGA
AGAAAACGGAACATAGCCAGAGAAAACTTTTGGGTCTTAGCGAGCTTCAC
AAACCCCTCCCAGAAGTTTTGGATCTGTTCGTTGCGAAAATGGCCTCCGA
GATACGTATGAAGATTGATGGTGAGAATGCCGTCGATGATTTTCCCATGC
ATGTGAGAAAAGTATTGCGATCGTCAGAGCATATCTACATCCAGGTCGGG
AAGGAGTGTTTTGACATTGTTGTGAGCGGTGTCGAATGA
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Coding sequence (CDS) from alignment at tig00000200_pilon:107497..108585+

>Ggra10752.t1 ID=Ggra10752.t1|Name=Ggra10752.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1089bp|location=Sequence derived from alignment at tig00000200_pilon:107497..108585+ (Gracilaria gracilis GNS1m male)
ATGAGAAGTTCAGAAGTGCCAGGGGGTGTGAACATACCTCTGGCGATGAA
GAGAATGAAGAGTTTAGGAGTGTCTGATGCAGTCGAAACATGCTCTATTT
TTGTGGATGGAACCATTCCGGCGGTTCTGGAATGGACTAGAATTTTTATG
GATGACTGCGTCATGTCGGCTACGAAGAATAGCAAACGTCCCGCTGAACT
GAAGAACGAAACAGCGCAAAGAATCTGTGACACGAATGTGTTCGTTGGTT
TTGAAGGTGGCACAGATTGGCGAAGAGGAGAGATGCGATTCTGGCAGAAT
ATCTGTGGCTTCGCTGTCAAGTTGCCGTGTAATGGAAAAGGACGCAATAT
ACTGGAGGCAATGAACAGATACCCTTCGTCTGCATTGGTGTACTGGGGGC
TTCGACCAATTTACGGAAGGTACATGACATTCGGAGATCGCCGAATTCCC
CGTGTGACCTTAGCTCAAAATGCTATATCGCTCTTCAGTCCTTCGGGAGT
ATGCCATGACAGAATAGGCACATGGTTTGACGAAATCGCATCTAGTAGAA
TGCAGGAACTGGTTATACATCTTTCCGCAGTGGCTGAATACATTTTTGTT
TGCCTTTGCCATGTTATGGACCGTGCGAAACCGGGAGATGATATATCGAA
AGAGTTCATCTCTTTCTTGGATTTTTCAATTGAACGCCATGGGCATATGT
CGTCATCCACCAAGTTGCTCATTGCAAATTCATTGTCGCTCAAGGGTCTA
TCCGAACAGAACATTTTCTTTTGTTTATCTAAGTCTACTTCAACCGCACA
CAGTGCAGTTATAGAGGGAGCTGCTGTTGCACGTAAAGTATACGGGAAGA
AGAAAACGGAACATAGCCAGAGAAAACTTTTGGGTCTTAGCGAGCTTCAC
AAACCCCTCCCAGAAGTTTTGGATCTGTTCGTTGCGAAAATGGCCTCCGA
GATACGTATGAAGATTGATGGTGAGAATGCCGTCGATGATTTTCCCATGC
ATGTGAGAAAAGTATTGCGATCGTCAGAGCATATCTACATCCAGGTCGGG
AAGGAGTGTTTTGACATTGTTGTGAGCGGTGTCGAATGA
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