Ggra10638.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10638.t1
Unique NameGgra10638.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:464987..465946 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10638Ggra10638Gracilaria gracilis GNS1m malegenetig00000904_pilon 464987..465946 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10638.t1.start1Ggra10638.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 464987..464989 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10638.t1.CDS1Ggra10638.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 464987..465946 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10638.t1.exon1Ggra10638.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 464987..465946 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10638.t1.stop1Ggra10638.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 465944..465946 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10638.t1Ggra10638.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 464987..465946 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10638.t1 ID=Ggra10638.t1|Name=Ggra10638.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=320bp
MTELLTSPTATQPTTQPAEQPAEQPAPEPAHQPPPPSLFSRVPTPALSSA
AVVLDSVALAALQAGHLGDAPFCMQLAGTLVVLPWMPYLYRSALLSRAPR
ALVLLAALAWAVVCLLPTFWALLLELFTGHRREGTSWVAGVWRIYAIMAL
WVLLALLNERVIRPWWTTNSDSFLAPFRRNSVAAQAHSMAVNRRASVLDT
IMQEMVTVSKRKILTTRTLETKTSKLQQNQNNVEELKLSLKEHKKKVQEA
DNADEKQQRLDDVQELMDRLQHAITDVDGLRNDILVLKKEVHNCEQQLQP
LQHRWEQSLHIENHTRFYR*
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spliced messenger RNA

>Ggra10638.t1 ID=Ggra10638.t1|Name=Ggra10638.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=960bp|location=Sequence derived from alignment at tig00000904_pilon:464987..465946+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
aTGACCGAGCTATTAACCTCGCCCACGGCCACCCAGCCCACCACCCAGCC
CGCCGAACAGCCCGCCGAACAGCCTGCCCCCGAGCCCGCTCACCAACCGC
CTCCGCCCTCGCTGTTCTCCAGGGTACCCACGCCTGCGCTCAGCTCCGCC
GCCGTCGTGCTGGACTCGGTGGCGCTAGCCGCCCTGCAAGCCGGCCATCT
CGGCGACGCGCCCTTCTGCATGCAGCTGGCAGGCACGCTCGTCGTGCTGC
CCTGGATGCCGTACTTGTACCGCTCTGCGCTTCTGAGCCGTGCGCCGCGC
GCGCTGGTGCTGCTGGCGGCACTGGCGTGGGCGGTCGTGTGCTTGCTGCC
CACTTTCTGGGCGCTGTTGTTGGAGTTGTTCACGGGGCATCGGCGCGAGG
GCACCTCGTGGGTGGCGGGCGTTTGGAGGATATATGCCATCATGGCGCTG
TGGGTTTTATTGGCTTTGCTCAATGAGCGCGTTATTCGCCCGTGGTGGAC
CACGAATTCCGACTCGTTTCTGGCACCGTTTCGGAGAAACTCGGTCGCGG
CGCAGGCGCATAGTATGGCTGTGAATCGACGTGCGTCGGTGCTGGACACT
ATCATGCAGGAGATGGTCACCGTTTCGAAGCGCAAGATCTTGACCACGCG
TACGCTCGAAACAAAGACGAGCAAGTTGCAGCAAAATCAGAATAACGTCG
AAGAGCTCAAACTTTCTTTGAAGGAGCACAAGAAAAAGGTGCAGGAGGCG
GATAATGCTGATGAAAAGCAACAACGTTTGGACGACGTTCAGGAGCTTAT
GGATCGGCTTCAGCATGCTATCACTGACGTTGATGGTCTCCGGAATGACA
TTCTTGTGCTCAAGAAGGAGGTGCATAACTGCGAGCAGCAGCTGCAACCG
TTGCAACATCGCTGGGAGCAATCGCTGCATATTGAGAATCACACCAGATT
CTACCGTTAA
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protein sequence of Ggra10638.t1

>Ggra10638.t1 ID=Ggra10638.t1|Name=Ggra10638.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MTELLTSPTATQPTTQPAEQPAEQPAPEPAHQPPPPSLFSRVPTPALSSA
AVVLDSVALAALQAGHLGDAPFCMQLAGTLVVLPWMPYLYRSALLSRAPR
ALVLLAALAWAVVCLLPTFWALLLELFTGHRREGTSWVAGVWRIYAIMAL
WVLLALLNERVIRPWWTTNSDSFLAPFRRNSVAAQAHSMAVNRRASVLDT
IMQEMVTVSKRKILTTRTLETKTSKLQQNQNNVEELKLSLKEHKKKVQEA
DNADEKQQRLDDVQELMDRLQHAITDVDGLRNDILVLKKEVHNCEQQLQP
LQHRWEQSLHIENHTRFYR*
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mRNA from alignment at tig00000904_pilon:464987..465946+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10638.t1 ID=Ggra10638.t1|Name=Ggra10638.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=960bp|location=Sequence derived from alignment at tig00000904_pilon:464987..465946+ (Gracilaria gracilis GNS1m male)
aTGACCGAGCTATTAACCTCGCCCACGGCCACCCAGCCCACCACCCAGCC
CGCCGAACAGCCCGCCGAACAGCCTGCCCCCGAGCCCGCTCACCAACCGC
CTCCGCCCTCGCTGTTCTCCAGGGTACCCACGCCTGCGCTCAGCTCCGCC
GCCGTCGTGCTGGACTCGGTGGCGCTAGCCGCCCTGCAAGCCGGCCATCT
CGGCGACGCGCCCTTCTGCATGCAGCTGGCAGGCACGCTCGTCGTGCTGC
CCTGGATGCCGTACTTGTACCGCTCTGCGCTTCTGAGCCGTGCGCCGCGC
GCGCTGGTGCTGCTGGCGGCACTGGCGTGGGCGGTCGTGTGCTTGCTGCC
CACTTTCTGGGCGCTGTTGTTGGAGTTGTTCACGGGGCATCGGCGCGAGG
GCACCTCGTGGGTGGCGGGCGTTTGGAGGATATATGCCATCATGGCGCTG
TGGGTTTTATTGGCTTTGCTCAATGAGCGCGTTATTCGCCCGTGGTGGAC
CACGAATTCCGACTCGTTTCTGGCACCGTTTCGGAGAAACTCGGTCGCGG
CGCAGGCGCATAGTATGGCTGTGAATCGACGTGCGTCGGTGCTGGACACT
ATCATGCAGGAGATGGTCACCGTTTCGAAGCGCAAGATCTTGACCACGCG
TACGCTCGAAACAAAGACGAGCAAGTTGCAGCAAAATCAGAATAACGTCG
AAGAGCTCAAACTTTCTTTGAAGGAGCACAAGAAAAAGGTGCAGGAGGCG
GATAATGCTGATGAAAAGCAACAACGTTTGGACGACGTTCAGGAGCTTAT
GGATCGGCTTCAGCATGCTATCACTGACGTTGATGGTCTCCGGAATGACA
TTCTTGTGCTCAAGAAGGAGGTGCATAACTGCGAGCAGCAGCTGCAACCG
TTGCAACATCGCTGGGAGCAATCGCTGCATATTGAGAATCACACCAGATT
CTACCGTTAA
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Coding sequence (CDS) from alignment at tig00000904_pilon:464987..465946+

>Ggra10638.t1 ID=Ggra10638.t1|Name=Ggra10638.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=960bp|location=Sequence derived from alignment at tig00000904_pilon:464987..465946+ (Gracilaria gracilis GNS1m male)
aTGACCGAGCTATTAACCTCGCCCACGGCCACCCAGCCCACCACCCAGCC
CGCCGAACAGCCCGCCGAACAGCCTGCCCCCGAGCCCGCTCACCAACCGC
CTCCGCCCTCGCTGTTCTCCAGGGTACCCACGCCTGCGCTCAGCTCCGCC
GCCGTCGTGCTGGACTCGGTGGCGCTAGCCGCCCTGCAAGCCGGCCATCT
CGGCGACGCGCCCTTCTGCATGCAGCTGGCAGGCACGCTCGTCGTGCTGC
CCTGGATGCCGTACTTGTACCGCTCTGCGCTTCTGAGCCGTGCGCCGCGC
GCGCTGGTGCTGCTGGCGGCACTGGCGTGGGCGGTCGTGTGCTTGCTGCC
CACTTTCTGGGCGCTGTTGTTGGAGTTGTTCACGGGGCATCGGCGCGAGG
GCACCTCGTGGGTGGCGGGCGTTTGGAGGATATATGCCATCATGGCGCTG
TGGGTTTTATTGGCTTTGCTCAATGAGCGCGTTATTCGCCCGTGGTGGAC
CACGAATTCCGACTCGTTTCTGGCACCGTTTCGGAGAAACTCGGTCGCGG
CGCAGGCGCATAGTATGGCTGTGAATCGACGTGCGTCGGTGCTGGACACT
ATCATGCAGGAGATGGTCACCGTTTCGAAGCGCAAGATCTTGACCACGCG
TACGCTCGAAACAAAGACGAGCAAGTTGCAGCAAAATCAGAATAACGTCG
AAGAGCTCAAACTTTCTTTGAAGGAGCACAAGAAAAAGGTGCAGGAGGCG
GATAATGCTGATGAAAAGCAACAACGTTTGGACGACGTTCAGGAGCTTAT
GGATCGGCTTCAGCATGCTATCACTGACGTTGATGGTCTCCGGAATGACA
TTCTTGTGCTCAAGAAGGAGGTGCATAACTGCGAGCAGCAGCTGCAACCG
TTGCAACATCGCTGGGAGCAATCGCTGCATATTGAGAATCACACCAGATT
CTACCGTTAA
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