Ggra10411.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10411.t1
Unique NameGgra10411.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length108
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:251571..251894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10411Ggra10411Gracilaria gracilis GNS1m malegenetig00000108_pilon 251571..251894 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10411.t1.stop1Ggra10411.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000108_pilon 251571..251573 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10411.t1.CDS1Ggra10411.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000108_pilon 251571..251894 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10411.t1.exon1Ggra10411.t1.exon1Gracilaria gracilis GNS1m maleexontig00000108_pilon 251571..251894 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10411.t1.start1Ggra10411.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000108_pilon 251892..251894 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10411.t1Ggra10411.t1Gracilaria gracilis GNS1m malepolypeptidetig00000108_pilon 251571..251894 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10411.t1 ID=Ggra10411.t1|Name=Ggra10411.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=108bp
MARAEKPTASSSAPSSASSSASSSAPAPPSTQRTAAPPAVAATPLTQMTL
AEYYEAHRAALERSLRAQHAQAVAALNHHVHQENARVHAMFHHNIALLRK
QALKYKP*
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spliced messenger RNA

>Ggra10411.t1 ID=Ggra10411.t1|Name=Ggra10411.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=324bp|location=Sequence derived from alignment at tig00000108_pilon:251571..251894- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCGCGCTGAGAAGCCCACCGCGTCCTCCTCCGCGCCCTCCTCCGC
GTCCTCCTCCGCGTCCTCCTCCGCGCCCGCACCGCCATCAACGCAGCGCA
CCGCCGCGCCGCCAGCCGTCGCCGCCACGCCGCTCACGCAAATGACGCTA
GCCGAGTACTACGAGGCGCATCGCGCCGCGTTAGAACGCTCGCTGCGAGC
GCAGCACGCGCAAGCCGTCGCCGCGCTCAACCACCACGTGCACCAAGAAA
ACGCGCGTGTGCACGCCATGTTCCACCACAACATCGCCTTGTTACGCAAG
CAGGCGCTCAAGTACAAGCCATGA
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protein sequence of Ggra10411.t1

>Ggra10411.t1 ID=Ggra10411.t1|Name=Ggra10411.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=108bp
MARAEKPTASSSAPSSASSSASSSAPAPPSTQRTAAPPAVAATPLTQMTL
AEYYEAHRAALERSLRAQHAQAVAALNHHVHQENARVHAMFHHNIALLRK
QALKYKP*
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mRNA from alignment at tig00000108_pilon:251571..251894-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10411.t1 ID=Ggra10411.t1|Name=Ggra10411.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=324bp|location=Sequence derived from alignment at tig00000108_pilon:251571..251894- (Gracilaria gracilis GNS1m male)
ATGGCGCGCGCTGAGAAGCCCACCGCGTCCTCCTCCGCGCCCTCCTCCGC
GTCCTCCTCCGCGTCCTCCTCCGCGCCCGCACCGCCATCAACGCAGCGCA
CCGCCGCGCCGCCAGCCGTCGCCGCCACGCCGCTCACGCAAATGACGCTA
GCCGAGTACTACGAGGCGCATCGCGCCGCGTTAGAACGCTCGCTGCGAGC
GCAGCACGCGCAAGCCGTCGCCGCGCTCAACCACCACGTGCACCAAGAAA
ACGCGCGTGTGCACGCCATGTTCCACCACAACATCGCCTTGTTACGCAAG
CAGGCGCTCAAGTACAAGCCATGA
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Coding sequence (CDS) from alignment at tig00000108_pilon:251571..251894-

>Ggra10411.t1 ID=Ggra10411.t1|Name=Ggra10411.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=324bp|location=Sequence derived from alignment at tig00000108_pilon:251571..251894- (Gracilaria gracilis GNS1m male)
ATGGCGCGCGCTGAGAAGCCCACCGCGTCCTCCTCCGCGCCCTCCTCCGC
GTCCTCCTCCGCGTCCTCCTCCGCGCCCGCACCGCCATCAACGCAGCGCA
CCGCCGCGCCGCCAGCCGTCGCCGCCACGCCGCTCACGCAAATGACGCTA
GCCGAGTACTACGAGGCGCATCGCGCCGCGTTAGAACGCTCGCTGCGAGC
GCAGCACGCGCAAGCCGTCGCCGCGCTCAACCACCACGTGCACCAAGAAA
ACGCGCGTGTGCACGCCATGTTCCACCACAACATCGCCTTGTTACGCAAG
CAGGCGCTCAAGTACAAGCCATGA
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