Ggra10281.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10281.t1
Unique NameGgra10281.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length510
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:363718..365247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog10090.ENSMUSP00000141020
PFAMsKA1,Pkinase
Max annot lvl33208|Metazoa
KEGG koko:K08798
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006325,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010646,GO:0010648,GO:0016043,GO:0016301,GO:0016310,GO:0016569,GO:0016570,GO:0016572,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0023051,GO:0023052,GO:0023057,GO:0031588,GO:0031667,GO:0031668,GO:0031669,GO:0032006,GO:0032007,GO:0032991,GO:0033554,GO:0035173,GO:0035174,GO:0035404,GO:0035556,GO:0036211,GO:0042149,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051716,GO:0061695,GO:0065007,GO:0071496,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902911,GO:1990234
Evalue3.87e-22
EggNOG OGsKOG0586@1|root,KOG0586@2759|Eukaryota,38DPZ@33154|Opisthokonta,3BBR0@33208|Metazoa,3CRTT@33213|Bilateria,48J5I@7711|Chordata,49FAW@7742|Vertebrata,3JJ42@40674|Mammalia,35RIA@314146|Euarchontoglires,4Q7MK@9989|Rodentia
EC2.7.11.1
DescriptionSperm motility kinase
COG categoryT
BRITEko00000,ko01000,ko01001,ko04812
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10281Ggra10281Gracilaria gracilis GNS1m malegenetig00000016_pilon 363718..365247 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10281.t1.start1Ggra10281.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 363718..363720 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10281.t1.CDS1Ggra10281.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 363718..365247 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10281.t1.exon1Ggra10281.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 363718..365247 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10281.t1.stop1Ggra10281.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 365245..365247 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10281.t1Ggra10281.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 363718..365247 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10281.t1 ID=Ggra10281.t1|Name=Ggra10281.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=510bp
MSYSPTVSAAIKAAAASHVAGGAPHVLDAWLLVRRRAFLTVPKRRYVVLT
QDHVLMIDSTPVLHLVDCQLSSNSSSRVIDLTPAPDCGIPYRIFADSPFQ
YSKWRAALQASASASIRRYYRIDAAALIGVGVHGVIRRAYPEMPFRDESI
ASSASMSDYSVHTSHTRSLSIPRFLNKSLTPTPHRRAPLPIAARPHSPPP
VATVLPDPAMQVPATNSDKRLLRNISHKTNPSSSHERTPILSPSHPLSVA
VKTVSRTGDGSVSVASEILFAKARLDHFAIVNVLDIFETVNEVHIVMEEC
MGGSLTQYVHTNGPLSHSLARSLFSPLLKAVGYMHASGIVHWDICPNNVL
FLHPDLPLEPKLIDFSTSRPINPATGRVPPEHSIFFEKGKVSSLACASPE
LLTSKAHRYAAKADMWQLGCVLYFLLIGKLPFSHRYPQDASVANTILTFC
KLRSAERHEFLFSPTYIGNIQLKSSAKEMIMKLLCPNPRMRPNALQCLRE
FSFLTHYIP*
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spliced messenger RNA

>Ggra10281.t1 ID=Ggra10281.t1|Name=Ggra10281.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1530bp|location=Sequence derived from alignment at tig00000016_pilon:363718..365247+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
aTGTCGTACAGCCCCACCGTGTccgccgccatcaaggccgccgccgcgtc
gcacgtcgccggtggcgcgccgcACGTGCTGGACGCCTGGCTGCTAGTGC
GTCGACGCGCCTTCCTCACCGTGCCCAAGCGCCGCTACGTCGTGCTCACG
CAGGACCACGTGCTCATGATCGACAGCACGCCCGTGTTGCACCTCGTCGA
TTGCCAGCTCAGCTCCAACTCCTCGTCGCGCGTCATCGACCTCACACCCG
CGCCCGACTGCGGCATTCCGTACCGCATCTTCGCCGACTCGCCCTTCCAG
TACTCCAAGTGGCGCGCCGCCTTGCAGGCAAGCGCCTCCGCCTCCATTCG
CCGCTACTACCGCATCGACGCCGCCGCGCTCATAGGCGTGGGCGTGCACG
GTGTGATCCGACGCGCCTACCCCGAGATGCCCTTCCGTGACGAATCCATC
GCGTCGTCAGCCTCCATGTCCGATTATTCTGTACACACTTCCCATACTCG
CTCTCTCTCCATCCCGCGCTTTCTCAACAAGTcgctcacgcccacgccgc
accgccgtgcgccgctgcccattgccgcgcgcccgcactcgccgccgccc
GTCGCCACCGTGCTGCCGGATCCCGCCATGCAGGTGCCTGCCACTAATAG
TGACAAGCGCTTGCTGCGAAACATCTCACATAAGACCAACCCTTCGTCGT
CGCATGAGCGAACGCCCATTCTGTCGCCGTCACACCCGCTGTCCGTCGCC
GTCAAGACCGTGTCTCGCACGGGAGATGGCTCCGTGTCCGTCGCCAGCGA
AATCCTCTTCGCCAAGGCGCGTCTGGATCACTTTGCCATCGTCAACGTGC
TGGACATTTTCGAGACCGTCAACGAGGTGCACATCGTCATGGAGGAGTGC
ATGGGCGGGTCGCTCACCCAGTATGTGCACACAAACGGTCCGCTGTCCCA
CTCCTTGGCCCGCTCTCTTTTCTCTCCCTTGCTCAAGGCCGTTGGCTACA
TGCACGCGTCGGGTATCGTTCACTGGGATATCTGTCCGAACAACGTGCTG
TTCTTGCATCCCGATCTCCCCTTAGAACCTAAACTAATTGATTTCTCTAC
CTCGCGCCCCATCAACCCCGCCACTGGCCGAGTGCCACCAGAGCACTCCA
TATTCTTTGAGAAGGGAAAAGTTTCATCACTGGCTTGTGCTTCTCCGGAA
CTGCTCACTTCCAAGGCCCATCGTTACGCGGCAAAGGCCGATATGTGGCA
GTTGGGCTGTGTACTCTATTTTCTGCTCATTGGAAAGCTTCCATTTTCGC
ATCGATACCCTCAGGACGCCTCTGTTGCCAACACCATTCTCACCTTCTGT
AAATTACGAAGTGCTGAGCGACATGAGTTTCTTTTCTCACCCACTTATAT
TGGTAACATTCAGCTCAAGTCGTCAGCGAAGGAGATGATCATGAAATTGT
TGTGTCCAAATCCTCGCATGAGACCGAATGCTCTTCAATGTCTGCGAGAG
TTCTCTTTCTTGACGCATTATATTCCATAA
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protein sequence of Ggra10281.t1

>Ggra10281.t1 ID=Ggra10281.t1|Name=Ggra10281.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=510bp
MSYSPTVSAAIKAAAASHVAGGAPHVLDAWLLVRRRAFLTVPKRRYVVLT
QDHVLMIDSTPVLHLVDCQLSSNSSSRVIDLTPAPDCGIPYRIFADSPFQ
YSKWRAALQASASASIRRYYRIDAAALIGVGVHGVIRRAYPEMPFRDESI
ASSASMSDYSVHTSHTRSLSIPRFLNKSLTPTPHRRAPLPIAARPHSPPP
VATVLPDPAMQVPATNSDKRLLRNISHKTNPSSSHERTPILSPSHPLSVA
VKTVSRTGDGSVSVASEILFAKARLDHFAIVNVLDIFETVNEVHIVMEEC
MGGSLTQYVHTNGPLSHSLARSLFSPLLKAVGYMHASGIVHWDICPNNVL
FLHPDLPLEPKLIDFSTSRPINPATGRVPPEHSIFFEKGKVSSLACASPE
LLTSKAHRYAAKADMWQLGCVLYFLLIGKLPFSHRYPQDASVANTILTFC
KLRSAERHEFLFSPTYIGNIQLKSSAKEMIMKLLCPNPRMRPNALQCLRE
FSFLTHYIP*
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mRNA from alignment at tig00000016_pilon:363718..365247+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10281.t1 ID=Ggra10281.t1|Name=Ggra10281.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1530bp|location=Sequence derived from alignment at tig00000016_pilon:363718..365247+ (Gracilaria gracilis GNS1m male)
aTGTCGTACAGCCCCACCGTGTccgccgccatcaaggccgccgccgcgtc
gcacgtcgccggtggcgcgccgcACGTGCTGGACGCCTGGCTGCTAGTGC
GTCGACGCGCCTTCCTCACCGTGCCCAAGCGCCGCTACGTCGTGCTCACG
CAGGACCACGTGCTCATGATCGACAGCACGCCCGTGTTGCACCTCGTCGA
TTGCCAGCTCAGCTCCAACTCCTCGTCGCGCGTCATCGACCTCACACCCG
CGCCCGACTGCGGCATTCCGTACCGCATCTTCGCCGACTCGCCCTTCCAG
TACTCCAAGTGGCGCGCCGCCTTGCAGGCAAGCGCCTCCGCCTCCATTCG
CCGCTACTACCGCATCGACGCCGCCGCGCTCATAGGCGTGGGCGTGCACG
GTGTGATCCGACGCGCCTACCCCGAGATGCCCTTCCGTGACGAATCCATC
GCGTCGTCAGCCTCCATGTCCGATTATTCTGTACACACTTCCCATACTCG
CTCTCTCTCCATCCCGCGCTTTCTCAACAAGTcgctcacgcccacgccgc
accgccgtgcgccgctgcccattgccgcgcgcccgcactcgccgccgccc
GTCGCCACCGTGCTGCCGGATCCCGCCATGCAGGTGCCTGCCACTAATAG
TGACAAGCGCTTGCTGCGAAACATCTCACATAAGACCAACCCTTCGTCGT
CGCATGAGCGAACGCCCATTCTGTCGCCGTCACACCCGCTGTCCGTCGCC
GTCAAGACCGTGTCTCGCACGGGAGATGGCTCCGTGTCCGTCGCCAGCGA
AATCCTCTTCGCCAAGGCGCGTCTGGATCACTTTGCCATCGTCAACGTGC
TGGACATTTTCGAGACCGTCAACGAGGTGCACATCGTCATGGAGGAGTGC
ATGGGCGGGTCGCTCACCCAGTATGTGCACACAAACGGTCCGCTGTCCCA
CTCCTTGGCCCGCTCTCTTTTCTCTCCCTTGCTCAAGGCCGTTGGCTACA
TGCACGCGTCGGGTATCGTTCACTGGGATATCTGTCCGAACAACGTGCTG
TTCTTGCATCCCGATCTCCCCTTAGAACCTAAACTAATTGATTTCTCTAC
CTCGCGCCCCATCAACCCCGCCACTGGCCGAGTGCCACCAGAGCACTCCA
TATTCTTTGAGAAGGGAAAAGTTTCATCACTGGCTTGTGCTTCTCCGGAA
CTGCTCACTTCCAAGGCCCATCGTTACGCGGCAAAGGCCGATATGTGGCA
GTTGGGCTGTGTACTCTATTTTCTGCTCATTGGAAAGCTTCCATTTTCGC
ATCGATACCCTCAGGACGCCTCTGTTGCCAACACCATTCTCACCTTCTGT
AAATTACGAAGTGCTGAGCGACATGAGTTTCTTTTCTCACCCACTTATAT
TGGTAACATTCAGCTCAAGTCGTCAGCGAAGGAGATGATCATGAAATTGT
TGTGTCCAAATCCTCGCATGAGACCGAATGCTCTTCAATGTCTGCGAGAG
TTCTCTTTCTTGACGCATTATATTCCATAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:363718..365247+

>Ggra10281.t1 ID=Ggra10281.t1|Name=Ggra10281.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1530bp|location=Sequence derived from alignment at tig00000016_pilon:363718..365247+ (Gracilaria gracilis GNS1m male)
aTGTCGTACAGCCCCACCGTGTccgccgccatcaaggccgccgccgcgtc
gcacgtcgccggtggcgcgccgcACGTGCTGGACGCCTGGCTGCTAGTGC
GTCGACGCGCCTTCCTCACCGTGCCCAAGCGCCGCTACGTCGTGCTCACG
CAGGACCACGTGCTCATGATCGACAGCACGCCCGTGTTGCACCTCGTCGA
TTGCCAGCTCAGCTCCAACTCCTCGTCGCGCGTCATCGACCTCACACCCG
CGCCCGACTGCGGCATTCCGTACCGCATCTTCGCCGACTCGCCCTTCCAG
TACTCCAAGTGGCGCGCCGCCTTGCAGGCAAGCGCCTCCGCCTCCATTCG
CCGCTACTACCGCATCGACGCCGCCGCGCTCATAGGCGTGGGCGTGCACG
GTGTGATCCGACGCGCCTACCCCGAGATGCCCTTCCGTGACGAATCCATC
GCGTCGTCAGCCTCCATGTCCGATTATTCTGTACACACTTCCCATACTCG
CTCTCTCTCCATCCCGCGCTTTCTCAACAAGTcgctcacgcccacgccgc
accgccgtgcgccgctgcccattgccgcgcgcccgcactcgccgccgccc
GTCGCCACCGTGCTGCCGGATCCCGCCATGCAGGTGCCTGCCACTAATAG
TGACAAGCGCTTGCTGCGAAACATCTCACATAAGACCAACCCTTCGTCGT
CGCATGAGCGAACGCCCATTCTGTCGCCGTCACACCCGCTGTCCGTCGCC
GTCAAGACCGTGTCTCGCACGGGAGATGGCTCCGTGTCCGTCGCCAGCGA
AATCCTCTTCGCCAAGGCGCGTCTGGATCACTTTGCCATCGTCAACGTGC
TGGACATTTTCGAGACCGTCAACGAGGTGCACATCGTCATGGAGGAGTGC
ATGGGCGGGTCGCTCACCCAGTATGTGCACACAAACGGTCCGCTGTCCCA
CTCCTTGGCCCGCTCTCTTTTCTCTCCCTTGCTCAAGGCCGTTGGCTACA
TGCACGCGTCGGGTATCGTTCACTGGGATATCTGTCCGAACAACGTGCTG
TTCTTGCATCCCGATCTCCCCTTAGAACCTAAACTAATTGATTTCTCTAC
CTCGCGCCCCATCAACCCCGCCACTGGCCGAGTGCCACCAGAGCACTCCA
TATTCTTTGAGAAGGGAAAAGTTTCATCACTGGCTTGTGCTTCTCCGGAA
CTGCTCACTTCCAAGGCCCATCGTTACGCGGCAAAGGCCGATATGTGGCA
GTTGGGCTGTGTACTCTATTTTCTGCTCATTGGAAAGCTTCCATTTTCGC
ATCGATACCCTCAGGACGCCTCTGTTGCCAACACCATTCTCACCTTCTGT
AAATTACGAAGTGCTGAGCGACATGAGTTTCTTTTCTCACCCACTTATAT
TGGTAACATTCAGCTCAAGTCGTCAGCGAAGGAGATGATCATGAAATTGT
TGTGTCCAAATCCTCGCATGAGACCGAATGCTCTTCAATGTCTGCGAGAG
TTCTCTTTCTTGACGCATTATATTCCATAA
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