Ggra10272.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10272.t1
Unique NameGgra10272.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length158
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:333286..333759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10272Ggra10272Gracilaria gracilis GNS1m malegenetig00000016_pilon 333286..333759 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10272.t1.start1Ggra10272.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 333286..333288 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10272.t1.CDS1Ggra10272.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 333286..333759 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10272.t1.exon1Ggra10272.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 333286..333759 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10272.t1.stop1Ggra10272.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 333757..333759 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10272.t1Ggra10272.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 333286..333759 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10272.t1 ID=Ggra10272.t1|Name=Ggra10272.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=158bp
MMRSDVGQSFVVYNEVEISTVADDVRSGVGIPLAGALCRKQEIEKGQSDE
FGGSISSAKTTEFFAERLGRDSPISASDDKSKFVHRLLALPKAEKSPLRT
HLLVLKESIGDQTVMDESGWKWYTPVPDDSGASFYPEIIGSDSHMEEADK
SDFARSV*
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spliced messenger RNA

>Ggra10272.t1 ID=Ggra10272.t1|Name=Ggra10272.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=474bp|location=Sequence derived from alignment at tig00000016_pilon:333286..333759+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGAGGTCAGATGTTGGTCAGAGTTTTGTTGTTTACAACGAAGTCGA
AATAAGTACAGTTGCAGATGACGTGCGTTCTGGTGTTGGCATTCCACTCG
CTGGTGCACTTTGTAGAAAACAAGAAATAGAGAAAGGGCAGTCTGATGAG
TTCGGTGGAAGTATATCGAGCGCAAAAACGACCGAGTTCTTCGCCGAACG
TCTTGGTCGTGATAGTCCAATTAGTGCAAGCGATGACAAAAGCAAATTTG
TTCATAGGTTGCTGGCGCTTCCGAAAGCCGAAAAAAGCCCATTGCGCACT
CATCTTCTTGTGTTAAAAGAATCTATTGGAGACCAAACGGTTATGGACGA
ATCAGGATGGAAGTGGTACACCCCAGTTCCTGATGATTCAGGTGCTTCAT
TTTACCCTGAAATCATTGGTTCTGACTCTCACATGGAAGAAGCAGATAAG
AGCGACTTCGCTCGCTCGGTTTGA
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protein sequence of Ggra10272.t1

>Ggra10272.t1 ID=Ggra10272.t1|Name=Ggra10272.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=158bp
MMRSDVGQSFVVYNEVEISTVADDVRSGVGIPLAGALCRKQEIEKGQSDE
FGGSISSAKTTEFFAERLGRDSPISASDDKSKFVHRLLALPKAEKSPLRT
HLLVLKESIGDQTVMDESGWKWYTPVPDDSGASFYPEIIGSDSHMEEADK
SDFARSV*
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mRNA from alignment at tig00000016_pilon:333286..333759+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10272.t1 ID=Ggra10272.t1|Name=Ggra10272.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=474bp|location=Sequence derived from alignment at tig00000016_pilon:333286..333759+ (Gracilaria gracilis GNS1m male)
ATGATGAGGTCAGATGTTGGTCAGAGTTTTGTTGTTTACAACGAAGTCGA
AATAAGTACAGTTGCAGATGACGTGCGTTCTGGTGTTGGCATTCCACTCG
CTGGTGCACTTTGTAGAAAACAAGAAATAGAGAAAGGGCAGTCTGATGAG
TTCGGTGGAAGTATATCGAGCGCAAAAACGACCGAGTTCTTCGCCGAACG
TCTTGGTCGTGATAGTCCAATTAGTGCAAGCGATGACAAAAGCAAATTTG
TTCATAGGTTGCTGGCGCTTCCGAAAGCCGAAAAAAGCCCATTGCGCACT
CATCTTCTTGTGTTAAAAGAATCTATTGGAGACCAAACGGTTATGGACGA
ATCAGGATGGAAGTGGTACACCCCAGTTCCTGATGATTCAGGTGCTTCAT
TTTACCCTGAAATCATTGGTTCTGACTCTCACATGGAAGAAGCAGATAAG
AGCGACTTCGCTCGCTCGGTTTGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:333286..333759+

>Ggra10272.t1 ID=Ggra10272.t1|Name=Ggra10272.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=474bp|location=Sequence derived from alignment at tig00000016_pilon:333286..333759+ (Gracilaria gracilis GNS1m male)
ATGATGAGGTCAGATGTTGGTCAGAGTTTTGTTGTTTACAACGAAGTCGA
AATAAGTACAGTTGCAGATGACGTGCGTTCTGGTGTTGGCATTCCACTCG
CTGGTGCACTTTGTAGAAAACAAGAAATAGAGAAAGGGCAGTCTGATGAG
TTCGGTGGAAGTATATCGAGCGCAAAAACGACCGAGTTCTTCGCCGAACG
TCTTGGTCGTGATAGTCCAATTAGTGCAAGCGATGACAAAAGCAAATTTG
TTCATAGGTTGCTGGCGCTTCCGAAAGCCGAAAAAAGCCCATTGCGCACT
CATCTTCTTGTGTTAAAAGAATCTATTGGAGACCAAACGGTTATGGACGA
ATCAGGATGGAAGTGGTACACCCCAGTTCCTGATGATTCAGGTGCTTCAT
TTTACCCTGAAATCATTGGTTCTGACTCTCACATGGAAGAAGCAGATAAG
AGCGACTTCGCTCGCTCGGTTTGA
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