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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005709073.1 |
PFAMs | NTP_transf_2,PAP_RNA-bind,PAP_central |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K09254,ko:K14376 |
KEGG Pathway | ko03015,ko04014,ko04624,ko05202,ko05203,map03015,map04014,map04624,map05202,map05203 |
GOs | GO:0000003,GO:0002682,GO:0002683,GO:0003006,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008285,GO:0009653,GO:0009791,GO:0009908,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0022414,GO:0031123,GO:0031124,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045824,GO:0046483,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048441,GO:0048444,GO:0048446,GO:0048449,GO:0048451,GO:0048465,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0061458,GO:0065007,GO:0070013,GO:0070566,GO:0071704,GO:0080134,GO:0090304,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:1901360,GO:1905392,GO:1905393 |
Evalue | 2.81e-154 |
EggNOG OGs | COG5186@1|root,KOG2245@2759|Eukaryota |
EC | 2.7.7.19 |
Description | polynucleotide adenylyltransferase activity |
COG category | A |
BRITE | ko00000,ko00001,ko01000,ko03000,ko03019 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10257.t1.start1 | Ggra10257.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 229125..229127 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10257.t1.intron1 | Ggra10257.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000016_pilon 229162..229236 + |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10257.t1.stop1 | Ggra10257.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 231423..231425 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10257.t1 ID=Ggra10257.t1|Name=Ggra10257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=742bp MLNNVSCCSRLIAFFFCSCISNLLPHLAPFPLLPQVSTMTIQKRWGVTDP ISTETPSPRDHRLSSELEECLHKNNLYETQEGKELRERVLVELSNIVKTW ATKVSVSQGMPERDAKNCGVRICTFGSYRLGVDGPGADIDTLVITPRHIL RKPHVFGEIDPTTGLTPLSDIVLVEILRATPEATEIVAVPRAFVPVIKFV YRGVEIDLLCAPLQMTRIPDKFDILDDKILRNVDDETQRSINGVRVTDAI LKLVPNIPNFRTVLRAIKLWAKRRQVYSNVLGFLGGVAWAILTARVCQLY PCAAPSTLLTRFFLLYDKWNWNTSTQSAPVLLCPISSGNPACGFKIWTPH GNQRHFMPIITPAYPSMNTTHNVSGSTLTIMKEEISRGLQITQTIEESSE KDASDGKGMDAWQGLFKPSEFFGDYKRFLQIDVSAEDQESFKVWKGTVES KLRLLIRHLEESGNVRKVRPYPPGYEDNPKLRVGCGRTFFIGLSLKPPPR QNVPNGTRRSLDLTAPIILWQQTLNSIPEKTSSMHLKVKSLKAVELPQFV QSEIPKEYRERKMSKKRKKRKASTPPRPVASTPNSSENATRQKAAGTNLP AANPVALQGQGTEEKAVPEPEPSVNGSESVKRIRVDEAGTSKPGNRVEQN SEVEPEETTTVEKLKALAAAKLGTTRMVNDELVTDTTDPSSAHQVQRTGE RKTISVKLRKDPGMVGEEDSTEESTIREVQGMVEANGVAEG* back to topspliced messenger RNA >Ggra10257.t1 ID=Ggra10257.t1|Name=Ggra10257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2226bp|location=Sequence derived from alignment at tig00000016_pilon:229125..231425+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCAACAACGTTAGCTGCTGCTCGAGGCTCATAGCTTTCTTCTTCTG CTCCTGCATCTCTAACCTCTTGCCACACCTGGCCCCCTTCCCACTACTTC CACAAGTGAGTACAATGACCATCCAGAAGCGTTGGGGCGTCACTGATCCT ATATCTACTGAGACGCCCTCACCGCGCGATCATCGCCTCAGTAGCGAACT TGAAGAATGCTTGCACAAGAACAACCTATATGAGACCCAGGAAGGAAAAG AACTGAGAGAGCGAGTTTTGGTTGAGTTGTCCAATATTGTTAAGACATGG GCCACAAAAGTGTCTGTTTCACAAGGAATGCCGGAACGTGACGCCAAGAA TTGTGGTGTGCGCATCTGCACATTTGGATCTTACAGACTGGGTGTGGACG GCCCTGGTGCAGATATAGATACGCTTGTTATCACCCCGCGACACATATTA CGGAAGCCACATGTTTTTGGCGAGATTGATCCTACAACAGGCTTAACGCC TCTAAGCGACATTGTTCTCGTTGAGATTTTGCGAGCTACTCCGGAGGCCA CAGAAATTGTAGCAGTTCCAAGAGCGTTTGTCCCAGTCATAAAGTTCGTT TATCGTGGTGTTGAAATTGATCTGCTATGTGCCCCACTTCAAATGACTCG CATCCCGGACAAATTTGACATACTTGATGATAAGATTCTGCGTAACGTTG ACGACGAGACGCAGCGCAGCATCAACGGTGTACGAGTAACTGACGCCATT CTCAAACTTGTTCCTAACATTCCCAACTTTCGAACAGTTCTTCGAGCCAT CAAGCTCTGGGCAAAACGTCGGCAGGTGTATTCAAACGTTCTCGGCTTTT TGGGCGGCGTTGCATGGGCTATCCTAACTGCTCGTGTGTGTCAGCTTTAC CCTTGTGCTGCCCCTTCCACGCTTTTGACTCGGTTTTTCCTTTTGTATGA CAAATGGAATTGGAATACTTCAACCCAGTCGGCCCCTGTTCTCCTCTGTC CGATATCAAGTGGCAATCCGGCGTGTGGGTTCAAGATTTGGACTCCGCAT GGTAATCAGAGGCATTTTATGCCCATTATTACACCGGCATACCCAAGCAT GAATACCACTCACAATGTCTCAGGCTCGACATTGACGATTATGAAGGAAG AGATCAGTCGCGGGTTGCAGATTACCCAAACAATTGAAGAAAGTTCTGAG AAGGATGCTTCCGATGGGAAAGGAATGGACGCGTGGCAAGGTTTATTCAA ACCTTCAGAATTCTTCGGCGACTACAAACGATTTCTACAAATCGACGTTT CTGCAGAAGATCAGGAGAGCTTTAAAGTCTGGAAAGGTACCGTTGAATCA AAGCTTAGATTGTTAATTCGCCATCTTGAAGAATCCGGAAATGTTCGCAA GGTGCGACCATATCCTCCGGGATATGAAGACAATCCCAAACTTCGCGTGG GATGTGGTAGAACGTTCTTTATTGGTTTGAGTCTTAAACCTCCTCCGCGA CAAAACGTTCCCAACGGAACACGTCGTTCCCTTGATCTCACTGCACCGAT TATCCTTTGGCAGCAAACTCTGAACAGCATTCCAGAGAAAACGAGTTCGA TGCACCTGAAGGTGAAAAGTTTGAAGGCAGTGGAACTGCCCCAATTCGTA CAGAGCGAAATACCGAAGGAGTATAGAGAAAGAAAGATGTCCAAGAAAAG GAAGAAAAGGAAGGCAAGCACGCCTCCAAGACCTGTGGCCTCTACTCCCA ATTCTAGCGAGAACGCTACGCGGCAAAAGGCAGCTGGGACAAACCTACCC GCTGCTAACCCAGTTGCCTTGcagggccaaggcaccgaggaaaaggcagt gccagagccagagccTTCGGTGAATGGGTCGGAGAGCGTAAAACGAATTC GAGTGGATGAAGCTGGGACGTCGAAACCAGGAAATCGTGTTGAACAGAAC TCAGAAGTGGAGCCAGAGGAAACCACAACGGTCGAAAAACTGAAGGCACT GGCGGCTGCGAAGTTAGGAACGACAAGAATGGTGAACGATGAGCTGGTAA CAGATACCACAGACCCAAGTTCCGCACACCAAGTCCAGCGAACCGGAGAG CGGAAGACAATTAGTGTTAAGCTGAGAAAAGACCCTGGGATGGTTGGGGA GGAGGATTCGACCGAGGAAAGTACTATAAGGGAAGTTCAGGGAATGGTTG AGGCGAACGGAGTGGCAGAGGGCTAG back to topprotein sequence of Ggra10257.t1 >Ggra10257.t1 ID=Ggra10257.t1|Name=Ggra10257.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=742bp
MLNNVSCCSRLIAFFFCSCISNLLPHLAPFPLLPQVSTMTIQKRWGVTDP ISTETPSPRDHRLSSELEECLHKNNLYETQEGKELRERVLVELSNIVKTW ATKVSVSQGMPERDAKNCGVRICTFGSYRLGVDGPGADIDTLVITPRHIL RKPHVFGEIDPTTGLTPLSDIVLVEILRATPEATEIVAVPRAFVPVIKFV YRGVEIDLLCAPLQMTRIPDKFDILDDKILRNVDDETQRSINGVRVTDAI LKLVPNIPNFRTVLRAIKLWAKRRQVYSNVLGFLGGVAWAILTARVCQLY PCAAPSTLLTRFFLLYDKWNWNTSTQSAPVLLCPISSGNPACGFKIWTPH GNQRHFMPIITPAYPSMNTTHNVSGSTLTIMKEEISRGLQITQTIEESSE KDASDGKGMDAWQGLFKPSEFFGDYKRFLQIDVSAEDQESFKVWKGTVES KLRLLIRHLEESGNVRKVRPYPPGYEDNPKLRVGCGRTFFIGLSLKPPPR QNVPNGTRRSLDLTAPIILWQQTLNSIPEKTSSMHLKVKSLKAVELPQFV QSEIPKEYRERKMSKKRKKRKASTPPRPVASTPNSSENATRQKAAGTNLP AANPVALQGQGTEEKAVPEPEPSVNGSESVKRIRVDEAGTSKPGNRVEQN SEVEPEETTTVEKLKALAAAKLGTTRMVNDELVTDTTDPSSAHQVQRTGE RKTISVKLRKDPGMVGEEDSTEESTIREVQGMVEANGVAEG* back to topmRNA from alignment at tig00000016_pilon:229125..231425+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10257.t1 ID=Ggra10257.t1|Name=Ggra10257.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2301bp|location=Sequence derived from alignment at tig00000016_pilon:229125..231425+ (Gracilaria gracilis GNS1m male) ATGCTCAACAACGTTAGCTGCTGCTCGAGGCTCATAGGTAGGCAAGTGCC
CTGCAGCAGAATTTGATATTCATTGCTTTCGTTTCGTTGCACCATTGCTC
ACCCCTGATTAGCTTTCTTCTTCTGCTCCTGCATCTCTAACCTCTTGCCA
CACCTGGCCCCCTTCCCACTACTTCCACAAGTGAGTACAATGACCATCCA
GAAGCGTTGGGGCGTCACTGATCCTATATCTACTGAGACGCCCTCACCGC
GCGATCATCGCCTCAGTAGCGAACTTGAAGAATGCTTGCACAAGAACAAC
CTATATGAGACCCAGGAAGGAAAAGAACTGAGAGAGCGAGTTTTGGTTGA
GTTGTCCAATATTGTTAAGACATGGGCCACAAAAGTGTCTGTTTCACAAG
GAATGCCGGAACGTGACGCCAAGAATTGTGGTGTGCGCATCTGCACATTT
GGATCTTACAGACTGGGTGTGGACGGCCCTGGTGCAGATATAGATACGCT
TGTTATCACCCCGCGACACATATTACGGAAGCCACATGTTTTTGGCGAGA
TTGATCCTACAACAGGCTTAACGCCTCTAAGCGACATTGTTCTCGTTGAG
ATTTTGCGAGCTACTCCGGAGGCCACAGAAATTGTAGCAGTTCCAAGAGC
GTTTGTCCCAGTCATAAAGTTCGTTTATCGTGGTGTTGAAATTGATCTGC
TATGTGCCCCACTTCAAATGACTCGCATCCCGGACAAATTTGACATACTT
GATGATAAGATTCTGCGTAACGTTGACGACGAGACGCAGCGCAGCATCAA
CGGTGTACGAGTAACTGACGCCATTCTCAAACTTGTTCCTAACATTCCCA
ACTTTCGAACAGTTCTTCGAGCCATCAAGCTCTGGGCAAAACGTCGGCAG
GTGTATTCAAACGTTCTCGGCTTTTTGGGCGGCGTTGCATGGGCTATCCT
AACTGCTCGTGTGTGTCAGCTTTACCCTTGTGCTGCCCCTTCCACGCTTT
TGACTCGGTTTTTCCTTTTGTATGACAAATGGAATTGGAATACTTCAACC
CAGTCGGCCCCTGTTCTCCTCTGTCCGATATCAAGTGGCAATCCGGCGTG
TGGGTTCAAGATTTGGACTCCGCATGGTAATCAGAGGCATTTTATGCCCA
TTATTACACCGGCATACCCAAGCATGAATACCACTCACAATGTCTCAGGC
TCGACATTGACGATTATGAAGGAAGAGATCAGTCGCGGGTTGCAGATTAC
CCAAACAATTGAAGAAAGTTCTGAGAAGGATGCTTCCGATGGGAAAGGAA
TGGACGCGTGGCAAGGTTTATTCAAACCTTCAGAATTCTTCGGCGACTAC
AAACGATTTCTACAAATCGACGTTTCTGCAGAAGATCAGGAGAGCTTTAA
AGTCTGGAAAGGTACCGTTGAATCAAAGCTTAGATTGTTAATTCGCCATC
TTGAAGAATCCGGAAATGTTCGCAAGGTGCGACCATATCCTCCGGGATAT
GAAGACAATCCCAAACTTCGCGTGGGATGTGGTAGAACGTTCTTTATTGG
TTTGAGTCTTAAACCTCCTCCGCGACAAAACGTTCCCAACGGAACACGTC
GTTCCCTTGATCTCACTGCACCGATTATCCTTTGGCAGCAAACTCTGAAC
AGCATTCCAGAGAAAACGAGTTCGATGCACCTGAAGGTGAAAAGTTTGAA
GGCAGTGGAACTGCCCCAATTCGTACAGAGCGAAATACCGAAGGAGTATA
GAGAAAGAAAGATGTCCAAGAAAAGGAAGAAAAGGAAGGCAAGCACGCCT
CCAAGACCTGTGGCCTCTACTCCCAATTCTAGCGAGAACGCTACGCGGCA
AAAGGCAGCTGGGACAAACCTACCCGCTGCTAACCCAGTTGCCTTGcagg
gccaaggcaccgaggaaaaggcagtgccagagccagagccTTCGGTGAAT
GGGTCGGAGAGCGTAAAACGAATTCGAGTGGATGAAGCTGGGACGTCGAA
ACCAGGAAATCGTGTTGAACAGAACTCAGAAGTGGAGCCAGAGGAAACCA
CAACGGTCGAAAAACTGAAGGCACTGGCGGCTGCGAAGTTAGGAACGACA
AGAATGGTGAACGATGAGCTGGTAACAGATACCACAGACCCAAGTTCCGC
ACACCAAGTCCAGCGAACCGGAGAGCGGAAGACAATTAGTGTTAAGCTGA
GAAAAGACCCTGGGATGGTTGGGGAGGAGGATTCGACCGAGGAAAGTACT
ATAAGGGAAGTTCAGGGAATGGTTGAGGCGAACGGAGTGGCAGAGGGCTA
G back to topCoding sequence (CDS) from alignment at tig00000016_pilon:229125..231425+ >Ggra10257.t1 ID=Ggra10257.t1|Name=Ggra10257.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2226bp|location=Sequence derived from alignment at tig00000016_pilon:229125..231425+ (Gracilaria gracilis GNS1m male) ATGCTCAACAACGTTAGCTGCTGCTCGAGGCTCATAGCTTTCTTCTTCTG CTCCTGCATCTCTAACCTCTTGCCACACCTGGCCCCCTTCCCACTACTTC CACAAGTGAGTACAATGACCATCCAGAAGCGTTGGGGCGTCACTGATCCT ATATCTACTGAGACGCCCTCACCGCGCGATCATCGCCTCAGTAGCGAACT TGAAGAATGCTTGCACAAGAACAACCTATATGAGACCCAGGAAGGAAAAG AACTGAGAGAGCGAGTTTTGGTTGAGTTGTCCAATATTGTTAAGACATGG GCCACAAAAGTGTCTGTTTCACAAGGAATGCCGGAACGTGACGCCAAGAA TTGTGGTGTGCGCATCTGCACATTTGGATCTTACAGACTGGGTGTGGACG GCCCTGGTGCAGATATAGATACGCTTGTTATCACCCCGCGACACATATTA CGGAAGCCACATGTTTTTGGCGAGATTGATCCTACAACAGGCTTAACGCC TCTAAGCGACATTGTTCTCGTTGAGATTTTGCGAGCTACTCCGGAGGCCA CAGAAATTGTAGCAGTTCCAAGAGCGTTTGTCCCAGTCATAAAGTTCGTT TATCGTGGTGTTGAAATTGATCTGCTATGTGCCCCACTTCAAATGACTCG CATCCCGGACAAATTTGACATACTTGATGATAAGATTCTGCGTAACGTTG ACGACGAGACGCAGCGCAGCATCAACGGTGTACGAGTAACTGACGCCATT CTCAAACTTGTTCCTAACATTCCCAACTTTCGAACAGTTCTTCGAGCCAT CAAGCTCTGGGCAAAACGTCGGCAGGTGTATTCAAACGTTCTCGGCTTTT TGGGCGGCGTTGCATGGGCTATCCTAACTGCTCGTGTGTGTCAGCTTTAC CCTTGTGCTGCCCCTTCCACGCTTTTGACTCGGTTTTTCCTTTTGTATGA CAAATGGAATTGGAATACTTCAACCCAGTCGGCCCCTGTTCTCCTCTGTC CGATATCAAGTGGCAATCCGGCGTGTGGGTTCAAGATTTGGACTCCGCAT GGTAATCAGAGGCATTTTATGCCCATTATTACACCGGCATACCCAAGCAT GAATACCACTCACAATGTCTCAGGCTCGACATTGACGATTATGAAGGAAG AGATCAGTCGCGGGTTGCAGATTACCCAAACAATTGAAGAAAGTTCTGAG AAGGATGCTTCCGATGGGAAAGGAATGGACGCGTGGCAAGGTTTATTCAA ACCTTCAGAATTCTTCGGCGACTACAAACGATTTCTACAAATCGACGTTT CTGCAGAAGATCAGGAGAGCTTTAAAGTCTGGAAAGGTACCGTTGAATCA AAGCTTAGATTGTTAATTCGCCATCTTGAAGAATCCGGAAATGTTCGCAA GGTGCGACCATATCCTCCGGGATATGAAGACAATCCCAAACTTCGCGTGG GATGTGGTAGAACGTTCTTTATTGGTTTGAGTCTTAAACCTCCTCCGCGA CAAAACGTTCCCAACGGAACACGTCGTTCCCTTGATCTCACTGCACCGAT TATCCTTTGGCAGCAAACTCTGAACAGCATTCCAGAGAAAACGAGTTCGA TGCACCTGAAGGTGAAAAGTTTGAAGGCAGTGGAACTGCCCCAATTCGTA CAGAGCGAAATACCGAAGGAGTATAGAGAAAGAAAGATGTCCAAGAAAAG GAAGAAAAGGAAGGCAAGCACGCCTCCAAGACCTGTGGCCTCTACTCCCA ATTCTAGCGAGAACGCTACGCGGCAAAAGGCAGCTGGGACAAACCTACCC GCTGCTAACCCAGTTGCCTTGcagggccaaggcaccgaggaaaaggcagt gccagagccagagccTTCGGTGAATGGGTCGGAGAGCGTAAAACGAATTC GAGTGGATGAAGCTGGGACGTCGAAACCAGGAAATCGTGTTGAACAGAAC TCAGAAGTGGAGCCAGAGGAAACCACAACGGTCGAAAAACTGAAGGCACT GGCGGCTGCGAAGTTAGGAACGACAAGAATGGTGAACGATGAGCTGGTAA CAGATACCACAGACCCAAGTTCCGCACACCAAGTCCAGCGAACCGGAGAG CGGAAGACAATTAGTGTTAAGCTGAGAAAAGACCCTGGGATGGTTGGGGA GGAGGATTCGACCGAGGAAAGTACTATAAGGGAAGTTCAGGGAATGGTTG AGGCGAACGGAGTGGCAGAGGGCTAG back to top
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