Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10251.t1.stop1 | Ggra10251.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 212440..212442 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10251.t1.start1 | Ggra10251.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 213994..213996 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=519bp
MPDVSTAFTASVPTSPPIPSSPPSAVAPPRSDTDNLKSSDTDAPEILKAV
NSDTLRDHDPSPVAAQPPPAAHQSTPDQSTPDQSTPDQCNSAIAPSVVPA
MPQSVSASMDTPSDVPIAPVNLRPRSKNRPGRPPNINENSLMRRLECIMA
VDTGRMAMSEACQHYDISARTFYRWLRNKHRLIELTGFTEEDFRNGPPPA
ERVALSDQIHRMPPATVSDLHSNLPHLPQQPAIAAQSPPNSVSRHPVVFA
QPMALKRRMPRIPHYSYGYNDRGLMQSQIYHRNTTKMPTQTPAAAEEPQR
TCNGRPVARRKSGSTLSPGNDIDVRESNPLYHLPDTDEGPMTPNLETCKR
RKISRSDSVILDDAVDDVLEVHPNQSFVGKCANQGSANGNGNIPNEQSQP
QSSPEDSQTKAANYPDAMGTVNNGVPDSHSRALDLSASQSPMQFVECNQK
HKIEIVSGQKRVNIAWYHGATSADIKEAIARRFSLVPGTPWSLVDTFSDE
IIVSDGMPSGRYHLTVFP* back to topspliced messenger RNA >Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1557bp|location=Sequence derived from alignment at tig00000016_pilon:212440..213996- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCCGATGTGTCTACCGCATTCACAGCGTCGGTTCCGACCTCGCCGCC
CATACCGTCCTCGCCTCCCAGTGCGGTTGCGCCCCCAAGGTCCGACACCG
ATAACCTCAAGTCCTCCGACACCGACGCTCCCGAAATTCTCAAAGCCGTT
AACTCGGACACGCTCAGGGATCATGACCCGTCACCCGTCGCTGCACAGCC
ACCTCCCGCCGCGCATCAATCCACGCCCGATCAATCCACGCCCGATCAAT
CCACGCCCGATCAATGCAATTCCGCCATAGCCCCATCCGTCGTGCCGGCG
ATGCCTCAATCTGTATCTGCGTCCATGGATACACCGTCAGATGTCCCCAT
AGCACCTGTTAACCTGCGTCCGCGCTCTAAGAACCGACCAGGACGCCCTC
CGAACATCAACGAGAACTCGCTCATGCGCCGATTGGAGTGCATCATGGCT
GTGGATACCGGCCGCATGGCCATGTCGGAGGCCTGTCAGCATTATGATAT
CTCTGCGCGTACGTTCTATCGCTGGCTGAGAAACAAGCACCGATTAATAG
AACTAACTGGTTTCACAGAAGAAGACTTTAGAAACGGACCGCCACCCGCG
GAGAGGGTAGCTCTTTCTGATCAGATACATAGAATGCCCCCAGCTACTGT
TTCCGATTTGCATTCTAACCTACCTCATCTGCCACAGCAGCCGGCAATCG
CCGCTCAATCGCCCCCAAACTCGGTATCACGTCATCCCGTTGTATTTGCC
CAACCTATGGCCTTGAAGCGTCGTATGCCAAGAATTCCGCATTATTCCTA
TGGTTATAACGATAGAGGGCTTATGCAGAGTCAAATATATCATCGAAATA
CCACCAAAATGCCTACTCAGACCCCCGCAGCCGCCGAAGAACCACAAAGG
ACATGTAATGGACGACCTGTCGCGCGCAGAAAGTCAGGATCAACGCTTTC
CCCAGGCAACGATATCGATGTGCGAGAATCAAATCCGTTGTATCATCTTC
CAGATACAGATGAAGGGCCGATGACACCCAACTTAGAAACCTGCAAGCGG
CGAAAGATTTCTCGCAGTGATTCTGTCATACTTGATGACGCCGTTGATGA
TGTTCTTGAGGTGCATCCGAACCAGTCTTTCGTTGGAAAATGTGCGAACC
AAGGGTCAGCCAACGGCAATGGCAACATTCCTAATGAACAATCTCAGCCT
CAATCTTCACCAGAAGATTCCCAAACTAAAGCGGCGAATTACCCTGATGC
AATGGGCACCGTCAACAACGGGGTGCCAGACAGCCATTCCCGTGCTTTGG
ATCTCTCGGCTAGTCAGAGCCCTATGCAGTTCGTTGAATGTAACCAGAAG
CATAAGATCGAGATTGTGTCGGGACAGAAACGAGTTAATATTGCTTGGTA
TCATGGAGCTACATCTGCGGACATCAAAGAAGCCATAGCGCGACGGTTTT
CGCTTGTGCCGGGTACCCCATGGTCACTTGTGGACACGTTCTCCGATGAG
ATTATCGTGTCCGACGGAATGCCAAGTGGCCGATACCATCTAACAGTGTT
CCCATAG back to topprotein sequence of Ggra10251.t1 >Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=519bp
MPDVSTAFTASVPTSPPIPSSPPSAVAPPRSDTDNLKSSDTDAPEILKAV
NSDTLRDHDPSPVAAQPPPAAHQSTPDQSTPDQSTPDQCNSAIAPSVVPA
MPQSVSASMDTPSDVPIAPVNLRPRSKNRPGRPPNINENSLMRRLECIMA
VDTGRMAMSEACQHYDISARTFYRWLRNKHRLIELTGFTEEDFRNGPPPA
ERVALSDQIHRMPPATVSDLHSNLPHLPQQPAIAAQSPPNSVSRHPVVFA
QPMALKRRMPRIPHYSYGYNDRGLMQSQIYHRNTTKMPTQTPAAAEEPQR
TCNGRPVARRKSGSTLSPGNDIDVRESNPLYHLPDTDEGPMTPNLETCKR
RKISRSDSVILDDAVDDVLEVHPNQSFVGKCANQGSANGNGNIPNEQSQP
QSSPEDSQTKAANYPDAMGTVNNGVPDSHSRALDLSASQSPMQFVECNQK
HKIEIVSGQKRVNIAWYHGATSADIKEAIARRFSLVPGTPWSLVDTFSDE
IIVSDGMPSGRYHLTVFP* back to topmRNA from alignment at tig00000016_pilon:212440..213996- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1557bp|location=Sequence derived from alignment at tig00000016_pilon:212440..213996- (Gracilaria gracilis GNS1m male)
ATGCCCGATGTGTCTACCGCATTCACAGCGTCGGTTCCGACCTCGCCGCC
CATACCGTCCTCGCCTCCCAGTGCGGTTGCGCCCCCAAGGTCCGACACCG
ATAACCTCAAGTCCTCCGACACCGACGCTCCCGAAATTCTCAAAGCCGTT
AACTCGGACACGCTCAGGGATCATGACCCGTCACCCGTCGCTGCACAGCC
ACCTCCCGCCGCGCATCAATCCACGCCCGATCAATCCACGCCCGATCAAT
CCACGCCCGATCAATGCAATTCCGCCATAGCCCCATCCGTCGTGCCGGCG
ATGCCTCAATCTGTATCTGCGTCCATGGATACACCGTCAGATGTCCCCAT
AGCACCTGTTAACCTGCGTCCGCGCTCTAAGAACCGACCAGGACGCCCTC
CGAACATCAACGAGAACTCGCTCATGCGCCGATTGGAGTGCATCATGGCT
GTGGATACCGGCCGCATGGCCATGTCGGAGGCCTGTCAGCATTATGATAT
CTCTGCGCGTACGTTCTATCGCTGGCTGAGAAACAAGCACCGATTAATAG
AACTAACTGGTTTCACAGAAGAAGACTTTAGAAACGGACCGCCACCCGCG
GAGAGGGTAGCTCTTTCTGATCAGATACATAGAATGCCCCCAGCTACTGT
TTCCGATTTGCATTCTAACCTACCTCATCTGCCACAGCAGCCGGCAATCG
CCGCTCAATCGCCCCCAAACTCGGTATCACGTCATCCCGTTGTATTTGCC
CAACCTATGGCCTTGAAGCGTCGTATGCCAAGAATTCCGCATTATTCCTA
TGGTTATAACGATAGAGGGCTTATGCAGAGTCAAATATATCATCGAAATA
CCACCAAAATGCCTACTCAGACCCCCGCAGCCGCCGAAGAACCACAAAGG
ACATGTAATGGACGACCTGTCGCGCGCAGAAAGTCAGGATCAACGCTTTC
CCCAGGCAACGATATCGATGTGCGAGAATCAAATCCGTTGTATCATCTTC
CAGATACAGATGAAGGGCCGATGACACCCAACTTAGAAACCTGCAAGCGG
CGAAAGATTTCTCGCAGTGATTCTGTCATACTTGATGACGCCGTTGATGA
TGTTCTTGAGGTGCATCCGAACCAGTCTTTCGTTGGAAAATGTGCGAACC
AAGGGTCAGCCAACGGCAATGGCAACATTCCTAATGAACAATCTCAGCCT
CAATCTTCACCAGAAGATTCCCAAACTAAAGCGGCGAATTACCCTGATGC
AATGGGCACCGTCAACAACGGGGTGCCAGACAGCCATTCCCGTGCTTTGG
ATCTCTCGGCTAGTCAGAGCCCTATGCAGTTCGTTGAATGTAACCAGAAG
CATAAGATCGAGATTGTGTCGGGACAGAAACGAGTTAATATTGCTTGGTA
TCATGGAGCTACATCTGCGGACATCAAAGAAGCCATAGCGCGACGGTTTT
CGCTTGTGCCGGGTACCCCATGGTCACTTGTGGACACGTTCTCCGATGAG
ATTATCGTGTCCGACGGAATGCCAAGTGGCCGATACCATCTAACAGTGTT
CCCATAG back to topCoding sequence (CDS) from alignment at tig00000016_pilon:212440..213996- >Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1557bp|location=Sequence derived from alignment at tig00000016_pilon:212440..213996- (Gracilaria gracilis GNS1m male)
ATGCCCGATGTGTCTACCGCATTCACAGCGTCGGTTCCGACCTCGCCGCC
CATACCGTCCTCGCCTCCCAGTGCGGTTGCGCCCCCAAGGTCCGACACCG
ATAACCTCAAGTCCTCCGACACCGACGCTCCCGAAATTCTCAAAGCCGTT
AACTCGGACACGCTCAGGGATCATGACCCGTCACCCGTCGCTGCACAGCC
ACCTCCCGCCGCGCATCAATCCACGCCCGATCAATCCACGCCCGATCAAT
CCACGCCCGATCAATGCAATTCCGCCATAGCCCCATCCGTCGTGCCGGCG
ATGCCTCAATCTGTATCTGCGTCCATGGATACACCGTCAGATGTCCCCAT
AGCACCTGTTAACCTGCGTCCGCGCTCTAAGAACCGACCAGGACGCCCTC
CGAACATCAACGAGAACTCGCTCATGCGCCGATTGGAGTGCATCATGGCT
GTGGATACCGGCCGCATGGCCATGTCGGAGGCCTGTCAGCATTATGATAT
CTCTGCGCGTACGTTCTATCGCTGGCTGAGAAACAAGCACCGATTAATAG
AACTAACTGGTTTCACAGAAGAAGACTTTAGAAACGGACCGCCACCCGCG
GAGAGGGTAGCTCTTTCTGATCAGATACATAGAATGCCCCCAGCTACTGT
TTCCGATTTGCATTCTAACCTACCTCATCTGCCACAGCAGCCGGCAATCG
CCGCTCAATCGCCCCCAAACTCGGTATCACGTCATCCCGTTGTATTTGCC
CAACCTATGGCCTTGAAGCGTCGTATGCCAAGAATTCCGCATTATTCCTA
TGGTTATAACGATAGAGGGCTTATGCAGAGTCAAATATATCATCGAAATA
CCACCAAAATGCCTACTCAGACCCCCGCAGCCGCCGAAGAACCACAAAGG
ACATGTAATGGACGACCTGTCGCGCGCAGAAAGTCAGGATCAACGCTTTC
CCCAGGCAACGATATCGATGTGCGAGAATCAAATCCGTTGTATCATCTTC
CAGATACAGATGAAGGGCCGATGACACCCAACTTAGAAACCTGCAAGCGG
CGAAAGATTTCTCGCAGTGATTCTGTCATACTTGATGACGCCGTTGATGA
TGTTCTTGAGGTGCATCCGAACCAGTCTTTCGTTGGAAAATGTGCGAACC
AAGGGTCAGCCAACGGCAATGGCAACATTCCTAATGAACAATCTCAGCCT
CAATCTTCACCAGAAGATTCCCAAACTAAAGCGGCGAATTACCCTGATGC
AATGGGCACCGTCAACAACGGGGTGCCAGACAGCCATTCCCGTGCTTTGG
ATCTCTCGGCTAGTCAGAGCCCTATGCAGTTCGTTGAATGTAACCAGAAG
CATAAGATCGAGATTGTGTCGGGACAGAAACGAGTTAATATTGCTTGGTA
TCATGGAGCTACATCTGCGGACATCAAAGAAGCCATAGCGCGACGGTTTT
CGCTTGTGCCGGGTACCCCATGGTCACTTGTGGACACGTTCTCCGATGAG
ATTATCGTGTCCGACGGAATGCCAAGTGGCCGATACCATCTAACAGTGTT
CCCATAG back to top
|