Ggra10224.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10224.t1
Unique NameGgra10224.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:149308..150285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10224Ggra10224Gracilaria gracilis GNS1m malegenetig00000016_pilon 149308..150285 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10224.t1.stop1Ggra10224.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 149308..149310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10224.t1.CDS1Ggra10224.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 149308..150285 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10224.t1.exon1Ggra10224.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 149308..150285 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10224.t1.start1Ggra10224.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 150283..150285 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10224.t1Ggra10224.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 149308..150285 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10224.t1 ID=Ggra10224.t1|Name=Ggra10224.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=326bp
MSVELPPFSPVPVPDVPNAPSFRALPHVSAQSSPRQSDLSSSESSAPAAQ
DDFVTEEHYQLYPRLRPHLYHNRRSSSPENVLVLVHNAAKREIADLLLVI
LPTIEHHATLTDFSCRIKDAPVFGERLYQWWSTLLRVFFFVAETDEDVVN
LVVKPVARYARKNDDHQMSNSLQLRQKSVLDRYSFAMEVVLRAADRALDD
FECVPDVPKLNKLVEKLTALSKFMLETMDTSLQLVQDAANIFDVEISSLE
YTVATSMSAFAKTDPNVFVYIFARWMRKESEVKHWLAKYAGLRARLFYES
WKRAHHDKRGSIVEQIAAMHKSSRE*
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spliced messenger RNA

>Ggra10224.t1 ID=Ggra10224.t1|Name=Ggra10224.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000016_pilon:149308..150285- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTGTTGAGCTCCCGCCCTTCTCCCCTGTGCCCGTACCCGACGTGCC
TAACGCCCCATCTTTCAGGGCCCTTCCGCATGTCTCTGCCCAATCAAGCC
CCCGTCAGTCGGACTTGTCCAGTTCCGAGAGCTCCGCTCCGGCCGCACAA
GATGACTTTGTTACCGAAGAGCACTACCAGCTTTACCCGCGCTTACGGCC
TCATCTGTACCACAATCGCCGTTCAAGCAGCCCGGAAAACGTTTTAGTGC
TGGTTCACAATGCTGCAAAACGCGAGATTGCTGACTTGTTGCTCGTTATT
CTTCCGACCATCGAGCACCACGCTACCCTCACTGACTTTTCATGCAGAAT
TAAAGACGCGCCAGTTTTTGGTGAGCGCCTGTATCAGTGGTGGTCCACCT
TGCTTCGTGTCTTTTTCTTTGTTGCTGAGACTGATGAAGACGTTGTTAAT
TTGGTGGTCAAGCCAGTTGCTCGTTATGCGAGAAAGAATGATGATCATCA
GATGAGCAATTCACTCCAGCTTCGTCAAAAATCCGTTTTGGATAGGTACT
CATTCGCCATGGAAGTGGTGCTACGAGCTGCCGACCGCGCATTGGATGAC
TTCGAATGTGTCCCTGACGTACCAAAGCTCAACAAGCTTGTCGAGAAGCT
CACCGCTCTGTCTAAATTCATGCTGGAAACCATGGATACGTCCTTGCAAC
TCGTACAAGATGCGGCCAATATTTTTGACGTAGAGATTTCGTCTTTGGAA
TACACTGTGGCTACTAGCATGTCTGCCTTTGCGAAGACAGACCCCAATGT
ATTTGTGTATATCTTTGCCAGATGGATGCGCAAAGAATCTGAGGTCAAAC
ATTGGCTGGCAAAATACGCAGGCCTTCGAGCGCGCCTGTTCTACGAATCC
TGGAAGCGAGCGCACCATGACAAACGTGGTTCTATTGTTGAACAGATTGC
TGCTATGCATAAGTCTTCGCGAGAGTAG
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protein sequence of Ggra10224.t1

>Ggra10224.t1 ID=Ggra10224.t1|Name=Ggra10224.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MSVELPPFSPVPVPDVPNAPSFRALPHVSAQSSPRQSDLSSSESSAPAAQ
DDFVTEEHYQLYPRLRPHLYHNRRSSSPENVLVLVHNAAKREIADLLLVI
LPTIEHHATLTDFSCRIKDAPVFGERLYQWWSTLLRVFFFVAETDEDVVN
LVVKPVARYARKNDDHQMSNSLQLRQKSVLDRYSFAMEVVLRAADRALDD
FECVPDVPKLNKLVEKLTALSKFMLETMDTSLQLVQDAANIFDVEISSLE
YTVATSMSAFAKTDPNVFVYIFARWMRKESEVKHWLAKYAGLRARLFYES
WKRAHHDKRGSIVEQIAAMHKSSRE*
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mRNA from alignment at tig00000016_pilon:149308..150285-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10224.t1 ID=Ggra10224.t1|Name=Ggra10224.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000016_pilon:149308..150285- (Gracilaria gracilis GNS1m male)
ATGTCTGTTGAGCTCCCGCCCTTCTCCCCTGTGCCCGTACCCGACGTGCC
TAACGCCCCATCTTTCAGGGCCCTTCCGCATGTCTCTGCCCAATCAAGCC
CCCGTCAGTCGGACTTGTCCAGTTCCGAGAGCTCCGCTCCGGCCGCACAA
GATGACTTTGTTACCGAAGAGCACTACCAGCTTTACCCGCGCTTACGGCC
TCATCTGTACCACAATCGCCGTTCAAGCAGCCCGGAAAACGTTTTAGTGC
TGGTTCACAATGCTGCAAAACGCGAGATTGCTGACTTGTTGCTCGTTATT
CTTCCGACCATCGAGCACCACGCTACCCTCACTGACTTTTCATGCAGAAT
TAAAGACGCGCCAGTTTTTGGTGAGCGCCTGTATCAGTGGTGGTCCACCT
TGCTTCGTGTCTTTTTCTTTGTTGCTGAGACTGATGAAGACGTTGTTAAT
TTGGTGGTCAAGCCAGTTGCTCGTTATGCGAGAAAGAATGATGATCATCA
GATGAGCAATTCACTCCAGCTTCGTCAAAAATCCGTTTTGGATAGGTACT
CATTCGCCATGGAAGTGGTGCTACGAGCTGCCGACCGCGCATTGGATGAC
TTCGAATGTGTCCCTGACGTACCAAAGCTCAACAAGCTTGTCGAGAAGCT
CACCGCTCTGTCTAAATTCATGCTGGAAACCATGGATACGTCCTTGCAAC
TCGTACAAGATGCGGCCAATATTTTTGACGTAGAGATTTCGTCTTTGGAA
TACACTGTGGCTACTAGCATGTCTGCCTTTGCGAAGACAGACCCCAATGT
ATTTGTGTATATCTTTGCCAGATGGATGCGCAAAGAATCTGAGGTCAAAC
ATTGGCTGGCAAAATACGCAGGCCTTCGAGCGCGCCTGTTCTACGAATCC
TGGAAGCGAGCGCACCATGACAAACGTGGTTCTATTGTTGAACAGATTGC
TGCTATGCATAAGTCTTCGCGAGAGTAG
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Coding sequence (CDS) from alignment at tig00000016_pilon:149308..150285-

>Ggra10224.t1 ID=Ggra10224.t1|Name=Ggra10224.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=978bp|location=Sequence derived from alignment at tig00000016_pilon:149308..150285- (Gracilaria gracilis GNS1m male)
ATGTCTGTTGAGCTCCCGCCCTTCTCCCCTGTGCCCGTACCCGACGTGCC
TAACGCCCCATCTTTCAGGGCCCTTCCGCATGTCTCTGCCCAATCAAGCC
CCCGTCAGTCGGACTTGTCCAGTTCCGAGAGCTCCGCTCCGGCCGCACAA
GATGACTTTGTTACCGAAGAGCACTACCAGCTTTACCCGCGCTTACGGCC
TCATCTGTACCACAATCGCCGTTCAAGCAGCCCGGAAAACGTTTTAGTGC
TGGTTCACAATGCTGCAAAACGCGAGATTGCTGACTTGTTGCTCGTTATT
CTTCCGACCATCGAGCACCACGCTACCCTCACTGACTTTTCATGCAGAAT
TAAAGACGCGCCAGTTTTTGGTGAGCGCCTGTATCAGTGGTGGTCCACCT
TGCTTCGTGTCTTTTTCTTTGTTGCTGAGACTGATGAAGACGTTGTTAAT
TTGGTGGTCAAGCCAGTTGCTCGTTATGCGAGAAAGAATGATGATCATCA
GATGAGCAATTCACTCCAGCTTCGTCAAAAATCCGTTTTGGATAGGTACT
CATTCGCCATGGAAGTGGTGCTACGAGCTGCCGACCGCGCATTGGATGAC
TTCGAATGTGTCCCTGACGTACCAAAGCTCAACAAGCTTGTCGAGAAGCT
CACCGCTCTGTCTAAATTCATGCTGGAAACCATGGATACGTCCTTGCAAC
TCGTACAAGATGCGGCCAATATTTTTGACGTAGAGATTTCGTCTTTGGAA
TACACTGTGGCTACTAGCATGTCTGCCTTTGCGAAGACAGACCCCAATGT
ATTTGTGTATATCTTTGCCAGATGGATGCGCAAAGAATCTGAGGTCAAAC
ATTGGCTGGCAAAATACGCAGGCCTTCGAGCGCGCCTGTTCTACGAATCC
TGGAAGCGAGCGCACCATGACAAACGTGGTTCTATTGTTGAACAGATTGC
TGCTATGCATAAGTCTTCGCGAGAGTAG
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