Ggra10214.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10214.t1
Unique NameGgra10214.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:108552..108974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10214Ggra10214Gracilaria gracilis GNS1m malegenetig00000016_pilon 108552..108974 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10214.t1.stop1Ggra10214.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 108552..108554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10214.t1.CDS1Ggra10214.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 108552..108974 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10214.t1.exon1Ggra10214.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 108552..108974 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10214.t1.start1Ggra10214.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 108972..108974 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10214.t1Ggra10214.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 108552..108974 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10214.t1 ID=Ggra10214.t1|Name=Ggra10214.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=141bp
MRERWRQTPFSAASAWAAVGAAAVDDGGVTDEGGVGEQHGAMRVDAAVAG
GAVAAAPAAYEGGASADAEAYVARGGFAAARERGDEDGGFVGGGVVGLER
RAGSARSGRCEGAPAALLRASAAAGGRAAVEGRKRSHRTA*
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spliced messenger RNA

>Ggra10214.t1 ID=Ggra10214.t1|Name=Ggra10214.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000016_pilon:108552..108974- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGGAACGGTGGAGGCAGACACCCTTCTCGGCTGCATCTGCATGGGC
TGCTGTGGGTGCTGCTGCGGTTGATGATGGGGGTGTAACTGATGAGGGGG
GCGTTGGTGAGCAGCATGGTGCGATGCGGGTGGATGCGGCTGTTGCGGGT
GGTGCTGTTGCGGCTGCGCCGGCTGCATATGAGGGTGGTGCATCTGCTGA
TGCGGAGGCATATGTAGCGAGGGGTGGCTTTGCGGCTGCGAGAGAGCGTG
GGGATGAAGATGGGGGATTTGTGGGAGGGGGTGTTGTTGGATTGGAACGC
CGAGCGGGTTCTGCACGTTCTGGAAGGTGTGAGGGTGCACCAGCGGCTCT
CTTACGTGCGAGTGCTGCAGCGGGTGGAAGGGCTGCGGTGGAGGGTAGGA
AGCGAAGCCACCGGACGGCATGA
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protein sequence of Ggra10214.t1

>Ggra10214.t1 ID=Ggra10214.t1|Name=Ggra10214.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MRERWRQTPFSAASAWAAVGAAAVDDGGVTDEGGVGEQHGAMRVDAAVAG
GAVAAAPAAYEGGASADAEAYVARGGFAAARERGDEDGGFVGGGVVGLER
RAGSARSGRCEGAPAALLRASAAAGGRAAVEGRKRSHRTA*
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mRNA from alignment at tig00000016_pilon:108552..108974-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10214.t1 ID=Ggra10214.t1|Name=Ggra10214.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000016_pilon:108552..108974- (Gracilaria gracilis GNS1m male)
ATGAGGGAACGGTGGAGGCAGACACCCTTCTCGGCTGCATCTGCATGGGC
TGCTGTGGGTGCTGCTGCGGTTGATGATGGGGGTGTAACTGATGAGGGGG
GCGTTGGTGAGCAGCATGGTGCGATGCGGGTGGATGCGGCTGTTGCGGGT
GGTGCTGTTGCGGCTGCGCCGGCTGCATATGAGGGTGGTGCATCTGCTGA
TGCGGAGGCATATGTAGCGAGGGGTGGCTTTGCGGCTGCGAGAGAGCGTG
GGGATGAAGATGGGGGATTTGTGGGAGGGGGTGTTGTTGGATTGGAACGC
CGAGCGGGTTCTGCACGTTCTGGAAGGTGTGAGGGTGCACCAGCGGCTCT
CTTACGTGCGAGTGCTGCAGCGGGTGGAAGGGCTGCGGTGGAGGGTAGGA
AGCGAAGCCACCGGACGGCATGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:108552..108974-

>Ggra10214.t1 ID=Ggra10214.t1|Name=Ggra10214.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=423bp|location=Sequence derived from alignment at tig00000016_pilon:108552..108974- (Gracilaria gracilis GNS1m male)
ATGAGGGAACGGTGGAGGCAGACACCCTTCTCGGCTGCATCTGCATGGGC
TGCTGTGGGTGCTGCTGCGGTTGATGATGGGGGTGTAACTGATGAGGGGG
GCGTTGGTGAGCAGCATGGTGCGATGCGGGTGGATGCGGCTGTTGCGGGT
GGTGCTGTTGCGGCTGCGCCGGCTGCATATGAGGGTGGTGCATCTGCTGA
TGCGGAGGCATATGTAGCGAGGGGTGGCTTTGCGGCTGCGAGAGAGCGTG
GGGATGAAGATGGGGGATTTGTGGGAGGGGGTGTTGTTGGATTGGAACGC
CGAGCGGGTTCTGCACGTTCTGGAAGGTGTGAGGGTGCACCAGCGGCTCT
CTTACGTGCGAGTGCTGCAGCGGGTGGAAGGGCTGCGGTGGAGGGTAGGA
AGCGAAGCCACCGGACGGCATGA
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