Ggra10069.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10069.t1
Unique NameGgra10069.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length123
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:173551..173919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10069Ggra10069Gracilaria gracilis GNS1m malegenetig00000862_pilon 173551..173919 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10069.t1.start1Ggra10069.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000862_pilon 173551..173553 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10069.t1.CDS1Ggra10069.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000862_pilon 173551..173919 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10069.t1.exon1Ggra10069.t1.exon1Gracilaria gracilis GNS1m maleexontig00000862_pilon 173551..173919 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10069.t1.stop1Ggra10069.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000862_pilon 173917..173919 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10069.t1Ggra10069.t1Gracilaria gracilis GNS1m malepolypeptidetig00000862_pilon 173551..173919 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10069.t1 ID=Ggra10069.t1|Name=Ggra10069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=123bp
MRLHIGSDTDLISVVSVLVETILSADGKNASVMEDIIELDKSGTHDLVQF
CSGRLGAGLRNLLSAKKEGELRLTDLIATANRLGGEIDGDWVIREVLSVV
CVLCITYMRRSESTAGYPSSAA*
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spliced messenger RNA

>Ggra10069.t1 ID=Ggra10069.t1|Name=Ggra10069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=369bp|location=Sequence derived from alignment at tig00000862_pilon:173551..173919+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGCTGCATATCGGATCGGATACGGATTTGATTTCGGTGGTAAGCGT
GCTCGTAGAGACTATTTTGTCGGCTGATGGAAAGAATGCATCTGTTATGG
AGGACATCATCGAGTTAGATAAATCTGGAACACATGACCTCGTGCAGTTC
TGTTCTGGACGCCTTGGTGCTGGACTGCGTAACCTTCTATCTGCGAAAAA
GGAAGGGGAGCTCAGGCTTACGGATTTGATTGCAACTGCCAATCGCCTCG
GCGGGGAAATTGATGGTGATTGGGTGATACGTGAAGTGCTCAGCGTTGTT
TGTGTGCTTTGCATAACGTATATGAGAAGATCCGAAAGCACCGCAGGATA
TCCATCTAGTGCCGCTTGA
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protein sequence of Ggra10069.t1

>Ggra10069.t1 ID=Ggra10069.t1|Name=Ggra10069.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=123bp
MRLHIGSDTDLISVVSVLVETILSADGKNASVMEDIIELDKSGTHDLVQF
CSGRLGAGLRNLLSAKKEGELRLTDLIATANRLGGEIDGDWVIREVLSVV
CVLCITYMRRSESTAGYPSSAA*
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mRNA from alignment at tig00000862_pilon:173551..173919+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10069.t1 ID=Ggra10069.t1|Name=Ggra10069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=369bp|location=Sequence derived from alignment at tig00000862_pilon:173551..173919+ (Gracilaria gracilis GNS1m male)
ATGCGGCTGCATATCGGATCGGATACGGATTTGATTTCGGTGGTAAGCGT
GCTCGTAGAGACTATTTTGTCGGCTGATGGAAAGAATGCATCTGTTATGG
AGGACATCATCGAGTTAGATAAATCTGGAACACATGACCTCGTGCAGTTC
TGTTCTGGACGCCTTGGTGCTGGACTGCGTAACCTTCTATCTGCGAAAAA
GGAAGGGGAGCTCAGGCTTACGGATTTGATTGCAACTGCCAATCGCCTCG
GCGGGGAAATTGATGGTGATTGGGTGATACGTGAAGTGCTCAGCGTTGTT
TGTGTGCTTTGCATAACGTATATGAGAAGATCCGAAAGCACCGCAGGATA
TCCATCTAGTGCCGCTTGA
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Coding sequence (CDS) from alignment at tig00000862_pilon:173551..173919+

>Ggra10069.t1 ID=Ggra10069.t1|Name=Ggra10069.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=369bp|location=Sequence derived from alignment at tig00000862_pilon:173551..173919+ (Gracilaria gracilis GNS1m male)
ATGCGGCTGCATATCGGATCGGATACGGATTTGATTTCGGTGGTAAGCGT
GCTCGTAGAGACTATTTTGTCGGCTGATGGAAAGAATGCATCTGTTATGG
AGGACATCATCGAGTTAGATAAATCTGGAACACATGACCTCGTGCAGTTC
TGTTCTGGACGCCTTGGTGCTGGACTGCGTAACCTTCTATCTGCGAAAAA
GGAAGGGGAGCTCAGGCTTACGGATTTGATTGCAACTGCCAATCGCCTCG
GCGGGGAAATTGATGGTGATTGGGTGATACGTGAAGTGCTCAGCGTTGTT
TGTGTGCTTTGCATAACGTATATGAGAAGATCCGAAAGCACCGCAGGATA
TCCATCTAGTGCCGCTTGA
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