Ggra10066.t2 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10066.t2
Unique NameGgra10066.t2
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length269
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:164848..165654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10066Ggra10066Gracilaria gracilis GNS1m malegenetig00000862_pilon 164848..165831 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t2.stop1Ggra10066.t2.stop1Gracilaria gracilis GNS1m malestop_codontig00000862_pilon 164848..164850 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t2.CDS1Ggra10066.t2.CDS1Gracilaria gracilis GNS1m maleCDStig00000862_pilon 164848..165654 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t2.exon1Ggra10066.t2.exon1Gracilaria gracilis GNS1m maleexontig00000862_pilon 164848..165654 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t2.start1Ggra10066.t2.start1Gracilaria gracilis GNS1m malestart_codontig00000862_pilon 165652..165654 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t2Ggra10066.t2Gracilaria gracilis GNS1m malepolypeptidetig00000862_pilon 164848..165654 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10066.t2 ID=Ggra10066.t2|Name=Ggra10066.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=269bp
MAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLPGAYDATGAE
IGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGG
DGIENCSDNGAICVFVRSEGRVLFLSEPYRNGSEPNEFVATQMSFDPAPH
LRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTP
LLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTA
NFLQCTENSDGHQIYLTE*
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spliced messenger RNA

>Ggra10066.t2 ID=Ggra10066.t2|Name=Ggra10066.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=807bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165654- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCATTACATCAATGTTGCTTTTCGTCATTGTAGAGATCCTGGCTTC
CTCCAATACTTTCACTACCTTTGCCACCGAATCTAAGCTACAGCGTTGCA
ATGTAACTGAACCTCTGTTACCGGGTGCGTACGACGCAACTGGAGCAGAA
ATTGGATTCTTCTCTTGCTTGCAAGTGAACAACAGCGACTTTTACATCTT
TCCCTCTAACCACAGTACCCCAGACGGTACCGTTGCTTGTGGCGATTCGT
ACGCTTTTCGATATGTGAATCAAGAGCGAGTTCAACAGAGTCTTGGAGGT
GATGGGATTGAGAACTGCTCCGATAATGGGGCCATATGTGTTTTCGTTCG
ATCTGAAGGGCGAGTACTATTCCTCTCGGAGCCTTACAGAAACGGTTCTG
AACCGAATGAGTTCGTTGCCACCCAAATGAGCTTCGATCCGGCACCTCAC
CTTCGGACGTTTGCAGAAAAGGCAACAGACTCGTTTTTACATAGTGTCTC
TGAAGAGCTTGAAGTTAGAAGACGAATGATCATGGGGTCACGGAACACTA
CATGTCGCTTTACCTCTCAAGGATCAGAACATACTAGGATTCCGACACCG
TTGCTTGCTGTTTCCATTTGCGTGTGGGTCATGTCGGTCGTTCTATTCTT
CATTTGTGTTCCCTTTAAGAGGAGGGTTTTCTTCGATATGAATAACCCCT
TGCATTGGGCAAACCGGGCCCGCCGCGCTGTTGATGATGAGGTGACCGCC
AACTTTCTACAGTGCACAGAGAACAGTGATGGTCACCAAATCTACTTGAC
CGAATAA
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protein sequence of Ggra10066.t2

>Ggra10066.t2 ID=Ggra10066.t2|Name=Ggra10066.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=269bp
MAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLPGAYDATGAE
IGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGG
DGIENCSDNGAICVFVRSEGRVLFLSEPYRNGSEPNEFVATQMSFDPAPH
LRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTP
LLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTA
NFLQCTENSDGHQIYLTE*
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mRNA from alignment at tig00000862_pilon:164848..165654-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10066.t2 ID=Ggra10066.t2|Name=Ggra10066.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=807bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165654- (Gracilaria gracilis GNS1m male)
ATGGCCATTACATCAATGTTGCTTTTCGTCATTGTAGAGATCCTGGCTTC
CTCCAATACTTTCACTACCTTTGCCACCGAATCTAAGCTACAGCGTTGCA
ATGTAACTGAACCTCTGTTACCGGGTGCGTACGACGCAACTGGAGCAGAA
ATTGGATTCTTCTCTTGCTTGCAAGTGAACAACAGCGACTTTTACATCTT
TCCCTCTAACCACAGTACCCCAGACGGTACCGTTGCTTGTGGCGATTCGT
ACGCTTTTCGATATGTGAATCAAGAGCGAGTTCAACAGAGTCTTGGAGGT
GATGGGATTGAGAACTGCTCCGATAATGGGGCCATATGTGTTTTCGTTCG
ATCTGAAGGGCGAGTACTATTCCTCTCGGAGCCTTACAGAAACGGTTCTG
AACCGAATGAGTTCGTTGCCACCCAAATGAGCTTCGATCCGGCACCTCAC
CTTCGGACGTTTGCAGAAAAGGCAACAGACTCGTTTTTACATAGTGTCTC
TGAAGAGCTTGAAGTTAGAAGACGAATGATCATGGGGTCACGGAACACTA
CATGTCGCTTTACCTCTCAAGGATCAGAACATACTAGGATTCCGACACCG
TTGCTTGCTGTTTCCATTTGCGTGTGGGTCATGTCGGTCGTTCTATTCTT
CATTTGTGTTCCCTTTAAGAGGAGGGTTTTCTTCGATATGAATAACCCCT
TGCATTGGGCAAACCGGGCCCGCCGCGCTGTTGATGATGAGGTGACCGCC
AACTTTCTACAGTGCACAGAGAACAGTGATGGTCACCAAATCTACTTGAC
CGAATAA
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Coding sequence (CDS) from alignment at tig00000862_pilon:164848..165654-

>Ggra10066.t2 ID=Ggra10066.t2|Name=Ggra10066.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=807bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165654- (Gracilaria gracilis GNS1m male)
ATGGCCATTACATCAATGTTGCTTTTCGTCATTGTAGAGATCCTGGCTTC
CTCCAATACTTTCACTACCTTTGCCACCGAATCTAAGCTACAGCGTTGCA
ATGTAACTGAACCTCTGTTACCGGGTGCGTACGACGCAACTGGAGCAGAA
ATTGGATTCTTCTCTTGCTTGCAAGTGAACAACAGCGACTTTTACATCTT
TCCCTCTAACCACAGTACCCCAGACGGTACCGTTGCTTGTGGCGATTCGT
ACGCTTTTCGATATGTGAATCAAGAGCGAGTTCAACAGAGTCTTGGAGGT
GATGGGATTGAGAACTGCTCCGATAATGGGGCCATATGTGTTTTCGTTCG
ATCTGAAGGGCGAGTACTATTCCTCTCGGAGCCTTACAGAAACGGTTCTG
AACCGAATGAGTTCGTTGCCACCCAAATGAGCTTCGATCCGGCACCTCAC
CTTCGGACGTTTGCAGAAAAGGCAACAGACTCGTTTTTACATAGTGTCTC
TGAAGAGCTTGAAGTTAGAAGACGAATGATCATGGGGTCACGGAACACTA
CATGTCGCTTTACCTCTCAAGGATCAGAACATACTAGGATTCCGACACCG
TTGCTTGCTGTTTCCATTTGCGTGTGGGTCATGTCGGTCGTTCTATTCTT
CATTTGTGTTCCCTTTAAGAGGAGGGTTTTCTTCGATATGAATAACCCCT
TGCATTGGGCAAACCGGGCCCGCCGCGCTGTTGATGATGAGGTGACCGCC
AACTTTCTACAGTGCACAGAGAACAGTGATGGTCACCAAATCTACTTGAC
CGAATAA
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