Gchil6965.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6965.t1
Unique Name	Gchil6965.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	237

Homology

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BLAST of Gchil6965.t1 vs. uniprot
Match: A0A2V3IFQ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFQ4_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 6.720e-21
Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 0

Query:    3 SAVATFTARVGPPRHVQPAGFRDFRGWLLRLNSAQSHSVWDELFRSISAAAGNDPHAIQLHKTDIVRSIVRMVVKPRADESSKLVSTNAGRQAGKPRGSGSTLMSVLDEQF 113
            +AV  F  +VG PR ++PAGFRDFRGWL  + S  + + W  L  ++         +I+  K D+VR IV+ VV PR  ESSKLVSTN GRQ  +P  +G TLM++LD  F
Sbjct:   31 AAVLQFANQVGQPRVIEPAGFRDFRGWLAYVGSHSAATAWAPLVDAVLRDTNGHRSSIEALKEDLVREIVKKVVIPRHGESSKLVSTNCGRQCARP-ANGVTLMTILDSIF 140

The following BLAST results are available for this feature:

BLAST of Gchil6965.t1 vs. uniprot

BLAST of Gchil6965.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IFQ4_9FLOR	6.720e-21	46.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004398_pilon	contig	tig00004398_pilon:442433..443143 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6965.t1	Gchil6965.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004398_pilon 442433..443143 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6965.t1 ID=Gchil6965.t1|Name=Gchil6965.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=237bp
MHSAVATFTARVGPPRHVQPAGFRDFRGWLLRLNSAQSHSVWDELFRSIS
AAAGNDPHAIQLHKTDIVRSIVRMVVKPRADESSKLVSTNAGRQAGKPRG
SGSTLMSVLDEQFKRWQRSHGMASSSTAHHTWPSSPPRASSTTTPPRATS
PSYTRAFSPIGKRAKGGGSHGARSPPPTTDRLPSVQQLLHATGASHPHAP
LPSFQELYDSIQRQNSPPKSHASSHSRKRHEYRRRT*