Gchil6941.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6941.t1
Unique Name	Gchil6941.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	596

Homology

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BLAST of Gchil6941.t1 vs. uniprot
Match: A0A2V3IHE7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHE7_9FLOR)

HSP 1 Score: 573 bits (1477), Expect = 6.740e-197
Identity = 309/574 (53.83%), Postives = 402/574 (70.03%), Query Frame = 0

Query:   27 REYVVAHQQEALKSYVRLALEKAVHWHLAQVKLNTPLDRN---DEDLVQEWLKPIYRERKRKPRLTRKESEELLITKALEALRPRRTKPPAPTLSLYARLMLIIIPELPKLCRMLLKASKFRIKQVKYGEFETARAMVWYAYGAKMPSPDILSRTYDLVEFESGRMQQSRPRKQLSDPRILRNGKRVNSMDEILAMSLVELTDRTMYCLADTAKPCMLYSDKNTAVCPLYEFVAEISRCAVHLNPALLELVKQCMDKKMYRNRLLFRLERNWDVVSLLWGEAPRLKEWYERVILVQRQGLINSLFGMMHSDYGQFEILGLRYTFGRGKFADQHMDAMPPYRIAAMELDREYLKKDSNFKKSVYMRNGVLVKKEPRNQVVVRAFILVVYAIVMVXXXXVLCVKGVNDGIVGYLEVVSLVTLGTIGTLVSIWQCLSSQSRPIRRAFQGCKEVHGIEDLLSVSYMRVFANKKKKEE--QLEVFRKWLAGNGYGENLPGIEVFFSGKDRYPLYDPKGIRVDHLSHVTLCDGYYLVRRPDEKARLLMRHGDNLRVEDICDAHAVMVSVSRRCTMRVGGD 595
            ++ V+ HQ++ L  YV LALEKAV       ++  P D N   DE++ + WL+ IYR  + K R+ R+ESEE  I +AL  L  R T     TL   A+ ++ ++PELP L  ML KAS   ++ VKYG++ETARA+ WYAYG  MPSP+ILSR YDLV ++SG + QS+P K   D RILR    + SMD+ILA+SLVELTDRT++CL +T     LYSD+ T +C L EFVAEI+RCA  L P L E V +     + R++LL ++ERN  ++ LLWG+  R+ +WYE  IL  R GL N LFGMMHSDYGQFEI GLRY FGR K+AD+H  A+P YR  A+++++  +KKD  F++SVYM++GVLV++EP  Q   R  ++++Y ++ +    V+ V        GY+EVVSLV +G IG  V++W+CLSSQSRPIR AF G KE H IEDL+SVSY+     +K K E  ++E FRKWLAG G+G NLPGI+VFF+GKD+YPLYDPKGIRVD LS VTLCDGYYLVRRPDEKAR L+RHGDNL V++  D HA++VS+S RC MRVGGD
Sbjct:   24 KQRVIEHQKDGLTRYVLLALEKAVVNETGSRRIE-PDDANNETDEEVAKLWLESIYRTERMKSRIGREESEERRIIEALGRL-DRDT-----TLRKRAKTVIKVVPELPSLYSMLNKASDLFVEHVKYGDYETARALAWYAYGPTMPSPEILSRAYDLVAYDSGLILQSKPMKGCPDLRILRKPTELRSMDDILALSLVELTDRTIHCLKNT----QLYSDRKTLICSLGEFVAEIARCAFSLVPELRERVIESFVNYLDRDKLLLKMERNETLIKLLWGDEKRMSKWYENHILKTRSGLTNFLFGMMHSDYGQFEINGLRYLFGRWKYADEHEQAIPYYRRNALKIEKWLMKKDPYFRESVYMKDGVLVRREPPLQRACRLLLIILYVMIGIALTLVVTVNSTLRDAAGYIEVVSLVLVGMIGVGVTLWECLSSQSRPIRYAFHGFKEAHTIEDLMSVSYVDRIRRRKSKFEGPEIERFRKWLAGIGFGNNLPGIDVFFTGKDKYPLYDPKGIRVDDLSEVTLCDGYYLVRRPDEKARELLRHGDNLHVDNFVDGHAIIVSMSNRCEMRVGGD 586

The following BLAST results are available for this feature:

BLAST of Gchil6941.t1 vs. uniprot

BLAST of Gchil6941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHE7_9FLOR	6.740e-197	53.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..400
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 401..424
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 431..453
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 454..595
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 425..430
None	No IPR available	TMHMM	TMhelix		coord: 402..424
None	No IPR available	TMHMM	TMhelix		coord: 431..453

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004398_pilon	contig	tig00004398_pilon:150291..152078 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6941.t1	Gchil6941.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004398_pilon 150291..152078 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=596bp
MSCRPSSTLRRNPQRVSVLLACEGRRREYVVAHQQEALKSYVRLALEKAV
HWHLAQVKLNTPLDRNDEDLVQEWLKPIYRERKRKPRLTRKESEELLITK
ALEALRPRRTKPPAPTLSLYARLMLIIIPELPKLCRMLLKASKFRIKQVK
YGEFETARAMVWYAYGAKMPSPDILSRTYDLVEFESGRMQQSRPRKQLSD
PRILRNGKRVNSMDEILAMSLVELTDRTMYCLADTAKPCMLYSDKNTAVC
PLYEFVAEISRCAVHLNPALLELVKQCMDKKMYRNRLLFRLERNWDVVSL
LWGEAPRLKEWYERVILVQRQGLINSLFGMMHSDYGQFEILGLRYTFGRG
KFADQHMDAMPPYRIAAMELDREYLKKDSNFKKSVYMRNGVLVKKEPRNQ
VVVRAFILVVYAIVMVVLTVVLCVKGVNDGIVGYLEVVSLVTLGTIGTLV
SIWQCLSSQSRPIRRAFQGCKEVHGIEDLLSVSYMRVFANKKKKEEQLEV
FRKWLAGNGYGENLPGIEVFFSGKDRYPLYDPKGIRVDHLSHVTLCDGYY
LVRRPDEKARLLMRHGDNLRVEDICDAHAVMVSVSRRCTMRVGGD*