Gchil6941.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6941.t1
Unique NameGchil6941.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length596
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:150291..152078 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6941Gchil6941Gracilaria chilensis NLEC103_M9 malegenetig00004398_pilon 150291..152078 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6941.t1.stop1Gchil6941.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004398_pilon 150291..150293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6941.t1.CDS1Gchil6941.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004398_pilon 150291..152078 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6941.t1.exon1Gchil6941.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004398_pilon 150291..152078 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6941.t1.start1Gchil6941.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004398_pilon 152076..152078 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6941.t1Gchil6941.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004398_pilon 150291..152078 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=596bp
MSCRPSSTLRRNPQRVSVLLACEGRRREYVVAHQQEALKSYVRLALEKAV
HWHLAQVKLNTPLDRNDEDLVQEWLKPIYRERKRKPRLTRKESEELLITK
ALEALRPRRTKPPAPTLSLYARLMLIIIPELPKLCRMLLKASKFRIKQVK
YGEFETARAMVWYAYGAKMPSPDILSRTYDLVEFESGRMQQSRPRKQLSD
PRILRNGKRVNSMDEILAMSLVELTDRTMYCLADTAKPCMLYSDKNTAVC
PLYEFVAEISRCAVHLNPALLELVKQCMDKKMYRNRLLFRLERNWDVVSL
LWGEAPRLKEWYERVILVQRQGLINSLFGMMHSDYGQFEILGLRYTFGRG
KFADQHMDAMPPYRIAAMELDREYLKKDSNFKKSVYMRNGVLVKKEPRNQ
VVVRAFILVVYAIVMVVLTVVLCVKGVNDGIVGYLEVVSLVTLGTIGTLV
SIWQCLSSQSRPIRRAFQGCKEVHGIEDLLSVSYMRVFANKKKKEEQLEV
FRKWLAGNGYGENLPGIEVFFSGKDRYPLYDPKGIRVDHLSHVTLCDGYY
LVRRPDEKARLLMRHGDNLRVEDICDAHAVMVSVSRRCTMRVGGD*
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spliced messenger RNA

>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1788bp|location=Sequence derived from alignment at tig00004398_pilon:150291..152078- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTGTCGACCCTCCTCCACGTTAAGGAGGAACCCCCAACGAGTGAG
CGTGTTACTTGCATGCGAAGGTCGGAGAAGAGAATATGTCGTTGCACATC
AGCAGGAGGCTCTCAAGTCATATGTACGTCTGGCACTGGAGAAAGCTGTT
CATTGGCACCTGGCTCAGGTTAAGTTAAATACGCCTCTAGATAGGAACGA
TGAAGATTTGGTTCAAGAATGGCTGAAACCCATATACCGCGAAAGGAAGC
GAAAACCAAGGTTGACCAGGAAAGAAAGTGAAGAATTGCTGATAACTAAA
GCACTTGAAGCACTCCGACCTCGAAGAACCAAGCCCCCTGCGCCAACACT
TTCTCTGTATGCAAGGCTGATGTTGATAATCATACCCGAGCTGCCCAAAC
TCTGCCGCATGTTGCTTAAGGCATCTAAATTTCGTATCAAGCAAGTGAAG
TATGGTGAGTTTGAAACAGCACGCGCAATGGTATGGTACGCATATGGTGC
AAAAATGCCGTCACCGGATATACTTTCGCGAACATATGATTTGGTCGAGT
TCGAGTCCGGTCGTATGCAACAATCCAGGCCAAGGAAACAGTTAAGCGAT
CCCAGAATACTCCGCAACGGCAAACGCGTGAATTCGATGGACGAAATTCT
GGCGATGTCACTGGTGGAACTCACAGACCGAACAATGTATTGTCTGGCAG
ATACTGCAAAGCCTTGTATGCTATACTCGGATAAGAACACAGCTGTTTGT
CCATTGTACGAATTTGTTGCAGAAATAAGTCGGTGTGCCGTGCACCTTAA
CCCCGCCTTACTGGAGCTCGTGAAGCAATGTATGGACAAAAAAATGTATC
GGAACAGGCTGTTGTTCCGGCTCGAAAGGAACTGGGATGTGGTCAGTTTA
TTATGGGGTGAAGCGCCCAGATTGAAAGAGTGGTACGAAAGAGTGATATT
AGTTCAAAGACAAGGATTGATAAACTCTCTGTTCGGAATGATGCATTCTG
ATTATGGACAGTTCGAAATCTTGGGGCTTCGATATACTTTTGGAAGAGGG
AAGTTTGCAGATCAACACATGGACGCTATGCCGCCGTATCGTATTGCTGC
GATGGAGCTTGATAGGGAGTACTTGAAGAAGGACAGCAACTTCAAGAAAT
CTGTGTACATGAGAAACGGCGTTCTGGTAAAAAAGGAACCAAGAAATCAG
GTAGTGGTGCGCGCGTTTATTCTGGTTGTGTACGCGATCGTAATGGTGGT
ATTGACGGTGGTGCTGTGTGTGAAGGGGGTAAATGACGGGATAGTGGGAT
ACCTTGAAGTAGTTTCACTGGTTACGCTTGGAACAATTGGGACACTGGTA
TCAATATGGCAGTGCCTCTCAAGCCAGTCACGCCCCATCCGCCGCGCATT
CCAGGGCTGCAAGGAGGTGCACGGAATTGAGGACCTGCTGAGTGTGTCGT
ATATGCGCGTGTTTGCAAACAAGAAGAAGAAAGAAGAACAGCTGGAGGTA
TTTCGCAAGTGGTTGGCTGGAAACGGATACGGGGAGAACCTGCCGGGCAT
CGAAGTTTTCTTTTCTGGAAAAGATCGGTACCCACTGTATGATCCGAAGG
GAATCCGCGTGGATCACCTAAGCCATGTGACGCTTTGTGATGGATACTAC
TTGGTGCGGCGGCCGGACGAGAAGGCGCGACTGCTGATGAGGCACGGTGA
TAACCTTCGAGTGGAAGACATTTGTGATGCACACGCGGTGATGGTGTCGG
TGTCGAGGCGGTGCACGATGCGAGTTGGCGGTGACTGA
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protein sequence of Gchil6941.t1

>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=596bp
MSCRPSSTLRRNPQRVSVLLACEGRRREYVVAHQQEALKSYVRLALEKAV
HWHLAQVKLNTPLDRNDEDLVQEWLKPIYRERKRKPRLTRKESEELLITK
ALEALRPRRTKPPAPTLSLYARLMLIIIPELPKLCRMLLKASKFRIKQVK
YGEFETARAMVWYAYGAKMPSPDILSRTYDLVEFESGRMQQSRPRKQLSD
PRILRNGKRVNSMDEILAMSLVELTDRTMYCLADTAKPCMLYSDKNTAVC
PLYEFVAEISRCAVHLNPALLELVKQCMDKKMYRNRLLFRLERNWDVVSL
LWGEAPRLKEWYERVILVQRQGLINSLFGMMHSDYGQFEILGLRYTFGRG
KFADQHMDAMPPYRIAAMELDREYLKKDSNFKKSVYMRNGVLVKKEPRNQ
VVVRAFILVVYAIVMVVLTVVLCVKGVNDGIVGYLEVVSLVTLGTIGTLV
SIWQCLSSQSRPIRRAFQGCKEVHGIEDLLSVSYMRVFANKKKKEEQLEV
FRKWLAGNGYGENLPGIEVFFSGKDRYPLYDPKGIRVDHLSHVTLCDGYY
LVRRPDEKARLLMRHGDNLRVEDICDAHAVMVSVSRRCTMRVGGD*
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mRNA from alignment at tig00004398_pilon:150291..152078-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1788bp|location=Sequence derived from alignment at tig00004398_pilon:150291..152078- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTGTCGACCCTCCTCCACGTTAAGGAGGAACCCCCAACGAGTGAG
CGTGTTACTTGCATGCGAAGGTCGGAGAAGAGAATATGTCGTTGCACATC
AGCAGGAGGCTCTCAAGTCATATGTACGTCTGGCACTGGAGAAAGCTGTT
CATTGGCACCTGGCTCAGGTTAAGTTAAATACGCCTCTAGATAGGAACGA
TGAAGATTTGGTTCAAGAATGGCTGAAACCCATATACCGCGAAAGGAAGC
GAAAACCAAGGTTGACCAGGAAAGAAAGTGAAGAATTGCTGATAACTAAA
GCACTTGAAGCACTCCGACCTCGAAGAACCAAGCCCCCTGCGCCAACACT
TTCTCTGTATGCAAGGCTGATGTTGATAATCATACCCGAGCTGCCCAAAC
TCTGCCGCATGTTGCTTAAGGCATCTAAATTTCGTATCAAGCAAGTGAAG
TATGGTGAGTTTGAAACAGCACGCGCAATGGTATGGTACGCATATGGTGC
AAAAATGCCGTCACCGGATATACTTTCGCGAACATATGATTTGGTCGAGT
TCGAGTCCGGTCGTATGCAACAATCCAGGCCAAGGAAACAGTTAAGCGAT
CCCAGAATACTCCGCAACGGCAAACGCGTGAATTCGATGGACGAAATTCT
GGCGATGTCACTGGTGGAACTCACAGACCGAACAATGTATTGTCTGGCAG
ATACTGCAAAGCCTTGTATGCTATACTCGGATAAGAACACAGCTGTTTGT
CCATTGTACGAATTTGTTGCAGAAATAAGTCGGTGTGCCGTGCACCTTAA
CCCCGCCTTACTGGAGCTCGTGAAGCAATGTATGGACAAAAAAATGTATC
GGAACAGGCTGTTGTTCCGGCTCGAAAGGAACTGGGATGTGGTCAGTTTA
TTATGGGGTGAAGCGCCCAGATTGAAAGAGTGGTACGAAAGAGTGATATT
AGTTCAAAGACAAGGATTGATAAACTCTCTGTTCGGAATGATGCATTCTG
ATTATGGACAGTTCGAAATCTTGGGGCTTCGATATACTTTTGGAAGAGGG
AAGTTTGCAGATCAACACATGGACGCTATGCCGCCGTATCGTATTGCTGC
GATGGAGCTTGATAGGGAGTACTTGAAGAAGGACAGCAACTTCAAGAAAT
CTGTGTACATGAGAAACGGCGTTCTGGTAAAAAAGGAACCAAGAAATCAG
GTAGTGGTGCGCGCGTTTATTCTGGTTGTGTACGCGATCGTAATGGTGGT
ATTGACGGTGGTGCTGTGTGTGAAGGGGGTAAATGACGGGATAGTGGGAT
ACCTTGAAGTAGTTTCACTGGTTACGCTTGGAACAATTGGGACACTGGTA
TCAATATGGCAGTGCCTCTCAAGCCAGTCACGCCCCATCCGCCGCGCATT
CCAGGGCTGCAAGGAGGTGCACGGAATTGAGGACCTGCTGAGTGTGTCGT
ATATGCGCGTGTTTGCAAACAAGAAGAAGAAAGAAGAACAGCTGGAGGTA
TTTCGCAAGTGGTTGGCTGGAAACGGATACGGGGAGAACCTGCCGGGCAT
CGAAGTTTTCTTTTCTGGAAAAGATCGGTACCCACTGTATGATCCGAAGG
GAATCCGCGTGGATCACCTAAGCCATGTGACGCTTTGTGATGGATACTAC
TTGGTGCGGCGGCCGGACGAGAAGGCGCGACTGCTGATGAGGCACGGTGA
TAACCTTCGAGTGGAAGACATTTGTGATGCACACGCGGTGATGGTGTCGG
TGTCGAGGCGGTGCACGATGCGAGTTGGCGGTGACTGA
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Coding sequence (CDS) from alignment at tig00004398_pilon:150291..152078-

>Gchil6941.t1 ID=Gchil6941.t1|Name=Gchil6941.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1788bp|location=Sequence derived from alignment at tig00004398_pilon:150291..152078- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTGTCGACCCTCCTCCACGTTAAGGAGGAACCCCCAACGAGTGAG
CGTGTTACTTGCATGCGAAGGTCGGAGAAGAGAATATGTCGTTGCACATC
AGCAGGAGGCTCTCAAGTCATATGTACGTCTGGCACTGGAGAAAGCTGTT
CATTGGCACCTGGCTCAGGTTAAGTTAAATACGCCTCTAGATAGGAACGA
TGAAGATTTGGTTCAAGAATGGCTGAAACCCATATACCGCGAAAGGAAGC
GAAAACCAAGGTTGACCAGGAAAGAAAGTGAAGAATTGCTGATAACTAAA
GCACTTGAAGCACTCCGACCTCGAAGAACCAAGCCCCCTGCGCCAACACT
TTCTCTGTATGCAAGGCTGATGTTGATAATCATACCCGAGCTGCCCAAAC
TCTGCCGCATGTTGCTTAAGGCATCTAAATTTCGTATCAAGCAAGTGAAG
TATGGTGAGTTTGAAACAGCACGCGCAATGGTATGGTACGCATATGGTGC
AAAAATGCCGTCACCGGATATACTTTCGCGAACATATGATTTGGTCGAGT
TCGAGTCCGGTCGTATGCAACAATCCAGGCCAAGGAAACAGTTAAGCGAT
CCCAGAATACTCCGCAACGGCAAACGCGTGAATTCGATGGACGAAATTCT
GGCGATGTCACTGGTGGAACTCACAGACCGAACAATGTATTGTCTGGCAG
ATACTGCAAAGCCTTGTATGCTATACTCGGATAAGAACACAGCTGTTTGT
CCATTGTACGAATTTGTTGCAGAAATAAGTCGGTGTGCCGTGCACCTTAA
CCCCGCCTTACTGGAGCTCGTGAAGCAATGTATGGACAAAAAAATGTATC
GGAACAGGCTGTTGTTCCGGCTCGAAAGGAACTGGGATGTGGTCAGTTTA
TTATGGGGTGAAGCGCCCAGATTGAAAGAGTGGTACGAAAGAGTGATATT
AGTTCAAAGACAAGGATTGATAAACTCTCTGTTCGGAATGATGCATTCTG
ATTATGGACAGTTCGAAATCTTGGGGCTTCGATATACTTTTGGAAGAGGG
AAGTTTGCAGATCAACACATGGACGCTATGCCGCCGTATCGTATTGCTGC
GATGGAGCTTGATAGGGAGTACTTGAAGAAGGACAGCAACTTCAAGAAAT
CTGTGTACATGAGAAACGGCGTTCTGGTAAAAAAGGAACCAAGAAATCAG
GTAGTGGTGCGCGCGTTTATTCTGGTTGTGTACGCGATCGTAATGGTGGT
ATTGACGGTGGTGCTGTGTGTGAAGGGGGTAAATGACGGGATAGTGGGAT
ACCTTGAAGTAGTTTCACTGGTTACGCTTGGAACAATTGGGACACTGGTA
TCAATATGGCAGTGCCTCTCAAGCCAGTCACGCCCCATCCGCCGCGCATT
CCAGGGCTGCAAGGAGGTGCACGGAATTGAGGACCTGCTGAGTGTGTCGT
ATATGCGCGTGTTTGCAAACAAGAAGAAGAAAGAAGAACAGCTGGAGGTA
TTTCGCAAGTGGTTGGCTGGAAACGGATACGGGGAGAACCTGCCGGGCAT
CGAAGTTTTCTTTTCTGGAAAAGATCGGTACCCACTGTATGATCCGAAGG
GAATCCGCGTGGATCACCTAAGCCATGTGACGCTTTGTGATGGATACTAC
TTGGTGCGGCGGCCGGACGAGAAGGCGCGACTGCTGATGAGGCACGGTGA
TAACCTTCGAGTGGAAGACATTTGTGATGCACACGCGGTGATGGTGTCGG
TGTCGAGGCGGTGCACGATGCGAGTTGGCGGTGACTGA
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