Gchil6949.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6949.t1
Unique NameGchil6949.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length491
Homology
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A2V3IHA2_9FLOR (Protein lin-54-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA2_9FLOR)

HSP 1 Score: 337 bits (864), Expect = 3.300e-108
Identity = 240/533 (45.03%), Postives = 286/533 (53.66%), Query Frame = 0
Query:    1 MPEPVTPVKPSPSRCLDSPLGP---PDPLFASAAFSTPQPSPSAASAARFNPDDLLVSPPPPTSTPDLRRKLFATDALLTNAPPSSIRRHPCLTGLSPPPPPLPHSQPPVNHRLDHHFRHHSADHSGATNTPSATLNHNSEAPASDHPQPPLTTDPKPEPVSDSLPSSVTQPPQQKPPFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDIHTKGCNCRKGCSKKYCVCRELKVACGPRCTCSGPKGCQNGK------NVQE--------------------------STVTDPRQPAACAKKRNHIEQLTPPSPLHA-IATSFSPGFPPLAALSPPLKLPDDPFDDLRDVITDPNDPLVSPDAIKTRNACSSFVPPVNRRIALDDDSFHDHSHLSL-SVEPKPTHAFEPNHSNTPKNALKLHV-MDLDSSPTTG---IKPETPPSKFRTAFG-SFRKSDKIEKYSRPRL-PRILRVKMGTGRALKRFNI 490
            M EP TP++PSP+R +D  LGP   PDPLFA A+F+TPQ SPSAA   RFNPDDLLVSPP   +TPDLRRKLFA         P     HP     S PP P P  +P   HR                                              P+    P  +  PP+            N +      L+                      P +  AV +ARS+VLSRDPRAFEPR+KAA    DIHTKGCNCRKGCSK YCVCREL+VACGPRCTCSGP GCQN        N+ E                          S     R+P   AK RNH+E LTPPSPL A  + +FSPGF PL ALSPPLKLPDDPFDDL++V++DPNDPL+SP+A+  R +     PPVNRRI LDDD       LSL  V+ K         S TPK+A+K+   +DL+SSPTT     +  + PSK R+    S R++D+I+K SRPRL PRILRVKMG+GRALKRF+I
Sbjct:    1 MTEPTTPLRPSPTRPIDPILGPSSSPDPLFAGASFATPQLSPSAA---RFNPDDLLVSPPXXPATPDLRRKLFAA--------PDPFIPHP-----STPPTPTPPRRPA--HR----------------------------------------------PLLTPTPHHIPIPPR------------NLRTKSMSSLH--------------------RAPNSDLAVRQARSTVLSRDPRAFEPRIKAAPTTSDIHTKGCNCRKGCSKNYCVCRELRVACGPRCTCSGPNGCQNRSVHSERNNLSEQLRSKLPSVATAXXXXXXXXXXVEAGSGGAHGRKPVVSAK-RNHLEHLTPPSPLPAAFSAAFSPGFLPLTALSPPLKLPDDPFDDLQNVMSDPNDPLISPEAMNPRTSHPILAPPVNRRITLDDD-------LSLLPVDNKSVDCLIGASSCTPKHAVKISSSLDLNSSPTTDGKLFRTNSTPSKLRSGLSYSLRQTDRIDKCSRPRLLPRILRVKMGSGRALKRFHI 429          
BLAST of Gchil6949.t1 vs. uniprot
Match: R7QCU4_CHOCR (CRC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCU4_CHOCR)

HSP 1 Score: 181 bits (458), Expect = 5.450e-48
Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 0
Query:  181 TKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVK--AASAAPDIHTKGCNCRKGCSKKYCVCRELKVACGPRCTCSGPKGCQNGKN 293
            TKC+CKAS+CLKLYCPCFASS  C P CTC+NCQN+  T  +V+ AR +VL+RDPRAFEP+V+   A+A+ DIH KGCNCRKGC+K YCVCREL+V CGPRCTCSGP GC NGK+
Sbjct:    8 TKCSCKASKCLKLYCPCFASSGFCGPDCTCKNCQNSQLTATSVHDARETVLARDPRAFEPKVRNSLATASGDIHIKGCNCRKGCAKNYCVCRELRVDCGPRCTCSGPNGCLNGKS 122          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A3M7KVS9_AUXPR (CRC domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KVS9_AUXPR)

HSP 1 Score: 120 bits (302), Expect = 1.390e-25
Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 0
Query:  175 PFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDI-HTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVTDPRQPAACAKKR 312
            PF   + KCNCK S+CLKLYC CFA +  C P CTC +C N      AV + R ++L R+P AF+ ++ A      + H +GCNC+K GC KKYC C +  +ACG  C C G K C          V +P + AA ++KR
Sbjct:  248 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHCKCEGCKNC----------VDNPLRAAAGSQKR 377          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A1D2ADM9_AUXPR (CRC domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ADM9_AUXPR)

HSP 1 Score: 120 bits (302), Expect = 2.410e-25
Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 0
Query:  175 PFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDI-HTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVTDPRQPAACAKKR 312
            PF   + KCNCK S+CLKLYC CFA +  C P CTC +C N      AV + R ++L R+P AF+ ++ A      + H +GCNC+K GC KKYC C +  +ACG  C C G K C          V +P + AA ++KR
Sbjct:  538 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHCKCEGCKNC----------VDNPLRAAAGSQKR 667          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A087SHD9_AUXPR (Lin-54-like protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SHD9_AUXPR)

HSP 1 Score: 110 bits (275), Expect = 4.720e-24
Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 0
Query:  175 PFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDI-HTKGCNCRK-GCSKKYCVCRELKVACGPRC 280
            PF   + KCNCK S+CLKLYC CFA +  C P CTC +C N      AV + R ++L R+P AF+ ++ A      + H +GCNC+K GC KKYC C +  +ACG  C
Sbjct:  100 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHC 207          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0CAU5_PARTE (CRC domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CAU5_PARTE)

HSP 1 Score: 110 bits (275), Expect = 5.310e-24
Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  183 CNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDIHTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVTD 301
            CNCK S+CLKLYC CFA++ +C+  C C  C NN       N  R  ++ R+P AF  +VK        H+KGCNCRK GC KKYC C ++ + C   C C G K C + K V+  T  D
Sbjct:  109 CNCKKSKCLKLYCDCFAANKLCSSKCNCCGCFNNSSNLIERNLYREKMVERNPEAFNQKVKEVDQKM-AHSKGCNCRKSGCKKKYCECYQMGIECSDNCKCDGCKNCSSNKLVKIFTQQD 227          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A7S4C148_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C148_CHRCT)

HSP 1 Score: 110 bits (274), Expect = 1.920e-23
Identity = 62/149 (41.61%), Postives = 79/149 (53.02%), Query Frame = 0
Query:  175 PFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDI--HTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQN--GKNVQESTVTDPRQPAACAKKRNHIEQL 318
            P +    +CNC+ SRCLKLYC CFAS   C   C CQ C NNP+      +A  S L R+P AF P++   +A  D+  HTKGC+C+K GC KKYC C +  + C   C CS    C+N  G   + +     R P   AKK    E L
Sbjct:   20 PVEMKRKQCNCRNSRCLKLYCECFASGQYCFG-CNCQGCHNNPENDEKRKRAIESTLERNPSAFRPKINHNAAETDLGRHTKGCHCKKSGCLKKYCECFQAGIMCTAACKCSE---CKNIAGNEERAALTLGGRVPTPNAKKPRRAEPL 164          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 6.810e-23
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 0
Query:  183 CNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDIHTKGCNCRKG-CSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQ-------ESTVTDPRQPAACAKKRNHI 315
            CNCK SRCLKLYC CFAS   C   C CQ+C NNP+      +A  S L R+P+AF P++  A      HT+GC+CRK  C KKYC C +  + C   C C+G   C+N +++        E+  T P      A KR  +
Sbjct:    7 CNCKNSRCLKLYCECFASGQYCL-ACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKINHAGDTLRRHTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAG---CKNYEDLDGSAPARNEAPSTSPAAAVRRAGKRKRL 143          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0E6U2_PARTE (CRC domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E6U2_PARTE)

HSP 1 Score: 106 bits (265), Expect = 7.230e-23
Identity = 52/120 (43.33%), Postives = 67/120 (55.83%), Query Frame = 0
Query:  183 CNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPDIHTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVTD 301
            CNCK S+CLKLYC CFA+  +C+  C C  C NN       N+    ++ R+P AF  +VK        H+KGCNCRK GC KKYC C +L + C   C C G + C + K V+  T  D
Sbjct:   85 CNCKKSKCLKLYCDCFAAGKLCSSKCNCCGCFNNSSNLLERNQFIEKMVERNPEAFNQKVKEVDYKL-AHSKGCNCRKSGCKKKYCECYQLGIECSDNCKCDGCQNCSSNKLVKIFTQQD 203          
BLAST of Gchil6949.t1 vs. uniprot
Match: A0A5J4YAE3_9CHLO (CRC domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAE3_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 6.450e-22
Identity = 67/187 (35.83%), Postives = 89/187 (47.59%), Query Frame = 0
Query:  157 PVSDSLPSSVTQPPQQKPPFQFTSTKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAAS------AAPDIHTKGCNCRK-GCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVTDPRQPAACAKK-----------RNHIEQLTPPSPLH 325
            P S  + S   Q  + +P    +   CNCK SRCLKLYC CFAS   C   C C NC NN +       A  ++L R+P AF P+++A +      A    H KGCNC+K GC KKYC C +  + CG  C C   K  + G   +E+      QP   A +           +N  ++L PP  LH
Sbjct:   37 PSSSLVASPARQRGRNRPSSGSSKKHCNCKNSRCLKLYCECFASGRYC-DGCNCVNCCNNMENESTRQSAVEAILERNPNAFRPKIQAGASEEGTVAGTARHNKGCNCKKSGCLKKYCECFQAGIYCGDNCKCIDCKNFE-GSEAREAVALTAFQPQDMASRHHQPLPHHSPAQNKRQRLAPPHSLH 221          
The following BLAST results are available for this feature:
BLAST of Gchil6949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHA2_9FLOR3.300e-10845.03Protein lin-54-like n=1 Tax=Gracilariopsis chorda ... [more]
R7QCU4_CHOCR5.450e-4870.43CRC domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A3M7KVS9_AUXPR1.390e-2542.86CRC domain-containing protein n=1 Tax=Auxenochlore... [more]
A0A1D2ADM9_AUXPR2.410e-2542.86CRC domain-containing protein n=2 Tax=Auxenochlore... [more]
A0A087SHD9_AUXPR4.720e-2446.30Lin-54-like protein n=1 Tax=Auxenochlorella protot... [more]
A0CAU5_PARTE5.310e-2444.17CRC domain-containing protein n=1 Tax=Paramecium t... [more]
A0A7S4C148_CHRCT1.920e-2341.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3AJR0_9EUKA6.810e-2341.13Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0E6U2_PARTE7.230e-2343.33CRC domain-containing protein n=1 Tax=Paramecium t... [more]
A0A5J4YAE3_9CHLO6.450e-2235.83CRC domain-containing protein n=1 Tax=Trebouxia sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 178..219
e-value: 2.1E-9
score: 47.2
coord: 251..294
e-value: 2.5E-7
score: 40.3
IPR005172CRC domainPFAMPF03638TCRcoord: 181..216
e-value: 1.1E-10
score: 41.6
IPR005172CRC domainPROSITEPS51634CRCcoord: 179..293
score: 25.834063
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..173
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 55..315
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 55..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:221390..222862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6949.t1Gchil6949.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 221390..222862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6949.t1 ID=Gchil6949.t1|Name=Gchil6949.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=491bp
MPEPVTPVKPSPSRCLDSPLGPPDPLFASAAFSTPQPSPSAASAARFNPD
DLLVSPPPPTSTPDLRRKLFATDALLTNAPPSSIRRHPCLTGLSPPPPPL
PHSQPPVNHRLDHHFRHHSADHSGATNTPSATLNHNSEAPASDHPQPPLT
TDPKPEPVSDSLPSSVTQPPQQKPPFQFTSTKCNCKASRCLKLYCPCFAS
SAVCAPTCTCQNCQNNPQTFPAVNKARSSVLSRDPRAFEPRVKAASAAPD
IHTKGCNCRKGCSKKYCVCRELKVACGPRCTCSGPKGCQNGKNVQESTVT
DPRQPAACAKKRNHIEQLTPPSPLHAIATSFSPGFPPLAALSPPLKLPDD
PFDDLRDVITDPNDPLVSPDAIKTRNACSSFVPPVNRRIALDDDSFHDHS
HLSLSVEPKPTHAFEPNHSNTPKNALKLHVMDLDSSPTTGIKPETPPSKF
RTAFGSFRKSDKIEKYSRPRLPRILRVKMGTGRALKRFNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam