Gchil5014.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5014.t1
Unique NameGchil5014.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length410
Homology
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 1.880e-30
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD++SDA+T+AYNTQVHRTT + PFELVL+R P  +A++ Q  +  F S   Y LKW++W+  L+  A KS+ + QA YKR+FD RLR      P  G+YVF+R+E     T+ +HKL+ VA GP++V  S   TVV+      ER
Sbjct:  549 WDLFSDAVTFAYNTQVHRTTNIAPFELVLARAPRSIALQAQPSLEGFSSNRAYYLKWQSWLESLIKGAGKSLRKEQARYKRNFDARLRKSKYDIPS-GSYVFLRKEQ-GTATEPKHKLAQVATGPYQVKESTENTVVIAIGDQEER 692          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 132 bits (332), Expect = 8.740e-30
Identity = 68/146 (46.58%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD++SDA+T+AYNTQVHRTT + PFELVL+R P  +A++ Q  +  F S   Y LKW++W+  L+  A +S+ + QA YKR+FD RLR P    P PG+YVF+R++     ++ +HKL+ VA GP++V  S   TVV+      ER
Sbjct:  552 WDLFSDAVTFAYNTQVHRTTNIAPFELVLARAPRSIALQAQPSLEGFSSNRAYYLKWQSWLESLMKGADRSLRKEQARYKRNFDARLRKPQYQIP-PGSYVFLRKKQ-GTASEPKHKLAQVATGPYQVRRSDQHTVVIAIGDQEER 695          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QJ39_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ39_CHOCR)

HSP 1 Score: 130 bits (326), Expect = 5.060e-29
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD++SDA+T +YNTQVHRTT +TPFELVL+R P  +A++ Q  + +F S   Y +KW++W+  L+  A KS+ + QA YKR+FD RLR P    P PG+YVF+R+E     ++ +HKL+ VA G + V  S   TVV+      ER
Sbjct:  507 WDLFSDAVTLSYNTQVHRTTNITPFELVLARAPRSIALQVQPTLENFSSSRAYYMKWQSWLESLMRGADKSLRKEQARYKRNFDARLRNPQYEIP-PGSYVFLRKEQ-GTASEPKHKLAQVATGLYHVRRSDQHTVVIAIGDQEER 650          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QJW9_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJW9_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 5.950e-26
Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 0
Query:    4 DIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVV 140
            +++SDA+T+AYNTQVHRTT + PF+LVL+R P  +A++ Q  +  F S   Y LKW++W+  L+  A KS+ + QA YKR+FD RLR      P   +YVF+ +E     TD +HKL+ VA GP+ V  S  GTVV+
Sbjct:  486 ELFSDAVTFAYNTQVHRTTNIAPFKLVLARAPRSIALQAQPSLEGFSSNRAYYLKWQSWLESLMKGAGKSLRKEQARYKRNFDARLRKSKYDIPS-RSYVFLPKEQ-GTATDPKHKLAQVATGPYAVKRSDQGTVVI 620          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QG96_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG96_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 1.140e-19
Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYY---NPRTDKR---HKLSPVAEGPFRVVSSLPGTVVV 140
            WD Y+DA+TY YN  V+R  G+ PF+LVLSRTP P+A++   R++   S  Q+++++  W+  L+  A  ++   +  YK++FDNR+R P+P   K G  V V RE       RT+K    +KL+P  E PF V+     TV +
Sbjct:  161 WDQYTDALTYGYNCTVNRMIGMKPFDLVLSRTPSPLALQQTPRLDPTASRAQFKIRYLAWLRGLMSTASSNLRTGRERYKQEFDNRIRYPVPDY-KVGDQVLVNREAALRSEERTEKNRVNNKLAPQTEVPFPVLQVDDHTVTI 303          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 79.0 bits (193), Expect = 4.000e-12
Identity = 60/162 (37.04%), Postives = 82/162 (50.62%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVE---PQHRVNSFPSVG---QYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLR-------GPL---PAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD Y   +T+AYNTQVHR+T  TPF+LVL+R P  +A+    PQ  V++        QY+      +   +   R  +  AQ  YK DFD ++R       G L     PP+P T    R +  +       KL P  EGPFRV S+   TVVVD++G + R
Sbjct:  451 WDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPPRPLTST-ERGDLPSNDGGPSVKLLPKTEGPFRVRSATETTVVVDQDGVSNR 611          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 1.060e-11
Identity = 63/166 (37.95%), Postives = 85/166 (51.20%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTP----LPVAVEPQ----HRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGP----------LPAPPKPGTYVFVR-REYYNPRTDKRH-KLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD Y   +T+AYNTQVHR+T  TPF+LVL+R P    LP  V PQ    HR +    V QY+      +   +  AR  +  +Q  YK DFD ++R            +  PP+P T V  R R      TD+   KL P  EGPFRV S+   TV+++++G   R
Sbjct:  531 WDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPGTV-PQDAGTHREDPRTPV-QYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQGTTGTDELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENR 694          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 75.5 bits (184), Expect = 3.560e-11
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVE-PQHRV----NSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPGTYVFVRREYYNPRT-----DKRHKLSPVAEGPFRVVSS-LPG-TVVVDKNG 144
            WD Y   +TYAYN QVH++TG TPF+LVL+R P  ++V+ P   +     S P+  Q +      + K++  A   +  AQA YKR+FD  +R  LP+  + G  VF+ R      T     D   KL P   GP+R + + + G TV +++NG
Sbjct:  161 WDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSPNGSEPTSAQMKRITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRT-LPSF-EVGQEVFLDRPPDFSATPLENEDGHRKLLPKTTGPYRFIKAPVDGDTVTIERNG 312          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 73.2 bits (178), Expect = 2.230e-10
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLR-GPLPAPPKPGTYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD Y   +T+AYNTQVHR+T  TPF+LVL+R P  + +    R     +  QY+      +   +  AR  +  +Q  YK DFD ++R  P+      G +V+V R    P T    + +   EGPFRV S+   TV+++++G   R
Sbjct:  243 WDDYLQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPEDPR-----TPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVA---GDFVYVDRPP-RPLTSVERR-TRAQEGPFRVRSATDTTVLIEQDGVENR 379          
BLAST of Gchil5014.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 1.360e-8
Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = 0
Query:    3 WDIYSDAITYAYNTQVHRTTGLTPFELVLSRTP----LPVAVEPQ----HRVNSFPSVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGP----------LPAPPKPGTYVFVRREYYNPRT--DKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNER 148
            WD Y   +T+AYNTQVHR+T  TPF+LVL+R P    LP  V PQ    H  +    V QY+      +   +  AR  +  +Q  YK + D ++R            +  PP+  T V  R    +P    D   KL P AEGPF V S+   TV+++++    R
Sbjct:  627 WDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGLILPGTV-PQDAGTHMEDPRTPV-QYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPVVRAGDFVYVDRPPRTLTSVERRMRVQSPTDTEDLSVKLLPKAEGPFNVRSATDTTVLIEQDSVENR 790          
The following BLAST results are available for this feature:
BLAST of Gchil5014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
R7QFB9_CHOCR1.880e-3047.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QG36_CHOCR8.740e-3046.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ39_CHOCR5.060e-2946.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJW9_CHOCR5.950e-2646.72Integrase catalytic domain-containing protein n=1 ... [more]
R7QG96_CHOCR1.140e-1938.89Integrase catalytic domain-containing protein n=1 ... [more]
R7QJ93_CHOCR4.000e-1237.04Integrase catalytic domain-containing protein n=3 ... [more]
R7QN04_CHOCR1.060e-1137.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q2U6_CHOCR3.560e-1136.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4X3_CHOCR2.230e-1034.69Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLF2_CHOCR1.360e-834.34Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..271
IPR027310Profilin conserved sitePROSITEPS00414PROFILINcoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004393_piloncontigtig00004393_pilon:2128730..2130086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5014.t1Gchil5014.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004393_pilon 2128730..2130086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5014.t1 ID=Gchil5014.t1|Name=Gchil5014.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=410bp
MTWDIYSDAITYAYNTQVHRTTGLTPFELVLSRTPLPVAVEPQHRVNSFP
SVGQYRLKWKNWITKLVPVARKSMERAQAAYKRDFDNRLRGPLPAPPKPG
TYVFVRREYYNPRTDKRHKLSPVAEGPFRVVSSLPGTVVVDKNGDNERSR
PTAAGGKRISPRRNGLGYHGYNGGTTPRRGTAPLTGSLRYTDFIGTTGNA
RNTWPSRPATLTGAAQRPPSGQPASSPDANPLPRDAAVNPTATQPRKGNQ
GARRPEAGKRDPTDAPHRVEATEASPHISGRTPSVLVDTGTPAGAAQAGL
ASHFVENGTNPMGEKGRDDKSKTASLAEPSEPTVRDGPTTRLHGHVTRHP
GHWLKATPRRRIAGTVNHSPPTAHRTAETAHQWERRMLQIKRRPPANRHQ
DGRTPANSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027310Profilin_CS