Gchil6585.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6585.t1
Unique NameGchil6585.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length143
Homology
BLAST of Gchil6585.t1 vs. uniprot
Match: A0A2V3J028_9FLOR (30S ribosomal protein S8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J028_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 1.290e-75
Identity = 105/141 (74.47%), Postives = 126/141 (89.36%), Query Frame = 0
Query:    1 MRGRGVMLADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEV 141
            MRG+GV+L DP+SDLF R+RNGQ A+RATI HPYSRF  D++  LI+QGYV S+ IIPPE PRAPQFN + ++L+YD+ G+PAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWIL+TPKGV+HCAEAR ++VGGE++GEV
Sbjct:    1 MRGKGVLLRDPVSDLFTRIRNGQTARRATILHPYSRFVSDIIGVLIKQGYVKSMRIIPPESPRAPQFNHIEVSLRYDDYGEPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILTTPKGVIHCAEARQLSVGGEIIGEV 141          
BLAST of Gchil6585.t1 vs. uniprot
Match: Q7XYA5_GRIJA (Ribosome protein S8 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA5_GRIJA)

HSP 1 Score: 180 bits (457), Expect = 5.750e-56
Identity = 86/142 (60.56%), Postives = 104/142 (73.24%), Query Frame = 0
Query:    1 MRGRGVMLADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            M  R V+L DPISDLF R+RNG  AK  +I+HPYSRF+  +V +LI Q Y+    I+PPE PR PQF+ + I L YD  G+PAI+ +RRVS PS RVYR I QLPLA  GLG+WILSTP GV+HC EAR   +GGEV+GEVF
Sbjct:    1 MSRRPVLLRDPISDLFTRIRNGYAAKHESIYHPYSRFSLAIVKSLISQNYLRDFRIVPPESPRHPQFDHIEIFLSYDLRGKPAIRALRRVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142          
BLAST of Gchil6585.t1 vs. uniprot
Match: A0A1X6PKC2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKC2_PORUM)

HSP 1 Score: 147 bits (372), Expect = 4.990e-43
Identity = 74/139 (53.24%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    4 RGVMLADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            +GV L D +SD FARLRNGQ A+RA +  P+SR    V+ TL   GY+S++ ++PP  P AP    + + LKY   G PA+ R+ RVSKPSRRVY     LP A++GLG W+LSTP+GV+   EAR  NVGGEVLG+VF
Sbjct:    5 KGVALHDALSDTFARLRNGQTARRAAVTVPHSRHVLAVLRTLTALGYLSAVRVVPPPSPAAPPHPTLAVDLKYGPGGAPAMVRLARVSKPSRRVYAGGRSLPPAASGLGEWLLSTPQGVMSGTEARRRNVGGEVLGQVF 143          
BLAST of Gchil6585.t1 vs. uniprot
Match: RS8_RHOCS (30S ribosomal protein S8 n=10 Tax=Alphaproteobacteria TaxID=28211 RepID=RS8_RHOCS)

HSP 1 Score: 125 bits (313), Expect = 3.220e-34
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L+DP+ D+  R+RNGQ A+ + I  P S+   +V++ L R+GY+   N+   E  R P    +RI LKY +EG+P IK I RVSKP RR+Y  IA LP   NGLG  ILSTP+GV+  AEAR  NVGGEVL +VF
Sbjct:    3 LSDPLGDMLTRIRNGQKARMSVITSPASKLRTNVLEVLKREGYIRGYNV---EDVR-PGVRNLRIELKY-HEGEPVIKEIHRVSKPGRRIYSKIADLPRVYNGLGIAILSTPRGVMSDAEARAANVGGEVLCKVF 132          
BLAST of Gchil6585.t1 vs. uniprot
Match: A0A0A0D5E9_9PROT (30S ribosomal protein S8 n=5 Tax=Bacteria TaxID=2 RepID=A0A0A0D5E9_9PROT)

HSP 1 Score: 124 bits (311), Expect = 6.480e-34
Identity = 68/135 (50.37%), Postives = 85/135 (62.96%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L+DP+ DL  R+RNGQ   +A I  P S+   +V+D L R+GY+        +    P F+ +++ LKY  EGQPAIKRI RVSKP RRVY  I  LP   NGLG  ILSTP+GV+   EAR  NVGGE+L  VF
Sbjct:    3 LSDPLGDLLTRIRNGQRVGKAVIETPASKLRANVLDVLKREGYIRGYETHEVK----PGFSAIKVELKYA-EGQPAIKRIDRVSKPGRRVYSGIKDLPKVYNGLGISILSTPRGVMSDVEARAANVGGEILARVF 132          
BLAST of Gchil6585.t1 vs. uniprot
Match: UPI001A9774CD (30S ribosomal protein S8 n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A9774CD)

HSP 1 Score: 124 bits (311), Expect = 6.480e-34
Identity = 67/135 (49.63%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L+DP+ D+  R+RNGQ+A++A +  P S    +V++ L R+GY+             P   ++RI LKY +EGQPAIK + RVSKP RRVY  IA+LP   NGLG  ILSTP+GV+   EAR  NVGGEVL  VF
Sbjct:    3 LSDPLGDMLTRIRNGQSARKAVVASPASNLRANVLEVLKREGYIRGYT----REEIRPGVQELRIELKY-HEGQPAIKEVHRVSKPGRRVYSKIAELPRVYNGLGISILSTPRGVMSDLEARAQNVGGEVLCRVF 132          
BLAST of Gchil6585.t1 vs. uniprot
Match: A0A1Z8ZJB3_9PROT (30S ribosomal protein S8 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z8ZJB3_9PROT)

HSP 1 Score: 124 bits (310), Expect = 9.190e-34
Identity = 68/135 (50.37%), Postives = 85/135 (62.96%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L+DPI D   R+RNGQ AK+  +  P S+  ++V+  L R+GY+             P  +++RI LKY NEGQP I RI+RVSKP  RVY  I  LP   NGLG  ILSTP+GV+   EARD NVGGEVL +VF
Sbjct:    3 LSDPIGDTLTRIRNGQRAKKGNVVSPASKLRENVLKVLEREGYIRGFE----RYNLRPGIDELRIDLKY-NEGQPVINRIKRVSKPGSRVYAKIKDLPRVYNGLGISILSTPQGVMSDHEARDANVGGEVLCQVF 132          
BLAST of Gchil6585.t1 vs. uniprot
Match: W1SCB5_9SPHN (30S ribosomal protein S8 n=21 Tax=Sphingomonadales TaxID=204457 RepID=W1SCB5_9SPHN)

HSP 1 Score: 123 bits (309), Expect = 1.260e-33
Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L DP+ D+  R+RNGQ AK+ ++  P S+    V+D L R+GY+   +          +   +RI LKY  EGQPAIK + RVSKP RRVY    +LP+  NGLG  I+STP+GVL  AEARD NVGGEVL EVF
Sbjct:    3 LTDPLGDMLTRIRNGQQAKKDSVMSPASKLRARVLDVLQREGYIRGYSE-----EALGKHAGLRIELKYF-EGQPAIKHVARVSKPGRRVYSGSKELPVIRNGLGITIVSTPRGVLSDAEARDQNVGGEVLAEVF 131          
BLAST of Gchil6585.t1 vs. uniprot
Match: A0A1L3JDU4_9SPHN (30S ribosomal protein S8 n=6 Tax=Sphingomonadales TaxID=204457 RepID=A0A1L3JDU4_9SPHN)

HSP 1 Score: 123 bits (309), Expect = 1.380e-33
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L DP+ D+  R+RNGQ AK+ ++  P S+  + V+D L R+GY+   +       R  Q   +RI LKY  EG+PAI+ + RVSKP RRVY    +LP+  NGLG  I+STP+GVL  AEAR+ NVGGE+L EVF
Sbjct:    3 LTDPLGDMLTRIRNGQRAKKDSVISPASKLREHVLDVLQREGYIRGYS--EEMLGRRAQHKGIRIELKYF-EGEPAIRHLARVSKPGRRVYSGSQELPVIRNGLGITIVSTPRGVLSDAEARENNVGGEILAEVF 134          
BLAST of Gchil6585.t1 vs. uniprot
Match: RS8_ZYMMO (30S ribosomal protein S8 n=4 Tax=Zymomonas mobilis TaxID=542 RepID=RS8_ZYMMO)

HSP 1 Score: 123 bits (308), Expect = 1.790e-33
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 0
Query:    8 LADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGYVSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRSIAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF 142
            L+DP+ DL  R+RNGQ+A++ ++  P S+    V+D L R+GY+           +    + +RI LKY  EGQPAI  + RVSKP RR+Y    +LP   NGLG  I+STPKGVL  AEARD NVGGEVL EVF
Sbjct:    3 LSDPLGDLLTRIRNGQHARKDSVVSPASKLRVRVLDVLAREGYIRGYTEA-----KLGNHDALRIELKYF-EGQPAIHHLARVSKPGRRIYSGSRELPRVRNGLGITIVSTPKGVLSDAEARDQNVGGEVLAEVF 131          
The following BLAST results are available for this feature:
BLAST of Gchil6585.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J028_9FLOR1.290e-7574.4730S ribosomal protein S8 n=1 Tax=Gracilariopsis ch... [more]
Q7XYA5_GRIJA5.750e-5660.56Ribosome protein S8 n=1 Tax=Griffithsia japonica T... [more]
A0A1X6PKC2_PORUM4.990e-4353.24Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
RS8_RHOCS3.220e-3451.1130S ribosomal protein S8 n=10 Tax=Alphaproteobacte... [more]
A0A0A0D5E9_9PROT6.480e-3450.3730S ribosomal protein S8 n=5 Tax=Bacteria TaxID=2 ... [more]
UPI001A9774CD6.480e-3449.6330S ribosomal protein S8 n=1 Tax=Arenibaculum pall... [more]
A0A1Z8ZJB3_9PROT9.190e-3450.3730S ribosomal protein S8 n=2 Tax=Alphaproteobacter... [more]
W1SCB5_9SPHN1.260e-3350.3730S ribosomal protein S8 n=21 Tax=Sphingomonadales... [more]
A0A1L3JDU4_9SPHN1.380e-3348.8930S ribosomal protein S8 n=6 Tax=Sphingomonadales ... [more]
RS8_ZYMMO1.790e-3349.6330S ribosomal protein S8 n=4 Tax=Zymomonas mobilis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 10..142
e-value: 1.1E-34
score: 119.1
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 7..139
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 112..129
IPR000630Ribosomal protein S8HAMAPMF_01302_BRibosomal_S8_Bcoord: 7..142
score: 24.357498
NoneNo IPR availableGENE3D3.30.1490.10coord: 86..142
e-value: 2.3E-18
score: 67.4
NoneNo IPR availableGENE3D3.30.1370.30coord: 9..84
e-value: 3.6E-14
score: 54.4
NoneNo IPR availablePANTHERPTHR11758:SF437S RIBOSOMAL PROTEIN S8, MITOCHONDRIALcoord: 7..139
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 7..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:700782..701210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6585.t1Gchil6585.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 700782..701210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6585.t1 ID=Gchil6585.t1|Name=Gchil6585.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=143bp
MRGRGVMLADPISDLFARLRNGQNAKRATIHHPYSRFAKDVVDTLIRQGY
VSSINIIPPECPRAPQFNQMRIALKYDNEGQPAIKRIRRVSKPSRRVYRS
IAQLPLASNGLGSWILSTPKGVLHCAEARDMNVGGEVLGEVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000630Ribosomal_S8
IPR035987Ribosomal_S8_sf